Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4TT4
DownloadVisualize
BU of 4tt4 by Molmil
Crystal structure of ATAD2A bromodomain complexed with H3(1-21)K14Ac peptide
分子名称: ATPase family AAA domain-containing protein 2, CHLORIDE ION, Histone H3(1-21)K4Ac, ...
著者Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
登録日2014-06-19
公開日2014-12-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
4TT2
DownloadVisualize
BU of 4tt2 by Molmil
Crystal structure of ATAD2A bromodomain complexed with H4(1-20)K5Ac peptide
分子名称: ATPase family AAA domain-containing protein 2, Histone H4K5Ac
著者Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
登録日2014-06-19
公開日2014-12-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
4TT6
DownloadVisualize
BU of 4tt6 by Molmil
Crystal structure of ATAD2A bromodomain double mutant N1063A-Y1064A in apo form
分子名称: ATPase family AAA domain-containing protein 2, CHLORIDE ION, GLYCEROL, ...
著者Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
登録日2014-06-19
公開日2014-12-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
4TU6
DownloadVisualize
BU of 4tu6 by Molmil
Crystal structure of apo ATAD2A bromodomain with N1064 alternate conformation
分子名称: ATPase family AAA domain-containing protein 2, SULFATE ION
著者Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
登録日2014-06-23
公開日2014-12-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
4TTE
DownloadVisualize
BU of 4tte by Molmil
Crystal structure of ATAD2A bromodomain complexed with methyl 3-amino-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzoate
分子名称: ATPase family AAA domain-containing protein 2, CHLORIDE ION, GLYCEROL, ...
著者Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
登録日2014-06-20
公開日2014-12-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
1SLX
DownloadVisualize
BU of 1slx by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; ZINC-BOUND
分子名称: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
著者Brinen, L.S, Fletterick, R.J.
登録日1996-02-07
公開日1996-07-11
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
7UTV
DownloadVisualize
BU of 7utv by Molmil
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
分子名称: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
著者Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
登録日2022-04-27
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTP
DownloadVisualize
BU of 7utp by Molmil
CPV Affinity Purified Polyclonal Fab A Site Fab
分子名称: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
著者Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
登録日2022-04-27
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTR
DownloadVisualize
BU of 7utr by Molmil
CPV Affinity Purified Polyclonal Fab B Site Fab
分子名称: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
著者Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
登録日2022-04-27
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTS
DownloadVisualize
BU of 7uts by Molmil
CPV Total-Fab Polyclonal A Site Fab
分子名称: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
著者Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
登録日2022-04-27
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTU
DownloadVisualize
BU of 7utu by Molmil
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
分子名称: Capsid protein 2, Heavy chain antibody fragment, Light chain antibody fragment
著者Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
登録日2022-04-27
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
1SLU
DownloadVisualize
BU of 1slu by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN
分子名称: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
著者Brinen, L.S, Fletterick, R.J.
登録日1996-02-07
公開日1996-07-11
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
1SLV
DownloadVisualize
BU of 1slv by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; COPPER-BOUND
分子名称: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
著者Brinen, L.S, Fletterick, R.J.
登録日1996-02-07
公開日1996-07-11
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
1TCE
DownloadVisualize
BU of 1tce by Molmil
SOLUTION NMR STRUCTURE OF THE SHC SH2 DOMAIN COMPLEXED WITH A TYROSINE-PHOSPHORYLATED PEPTIDE FROM THE T-CELL RECEPTOR, MINIMIZED AVERAGE STRUCTURE
分子名称: PHOSPHOPEPTIDE OF THE ZETA CHAIN OF T CELL RECEPTOR, SHC
著者Zhou, M.-M, Meadows, R.P, Logan, T.M, Yoon, H.S, Wade, W.R, Ravichandran, K.S, Burakoff, S.J, Feisk, S.W.
登録日1996-03-27
公開日1997-05-15
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of the Shc SH2 domain complexed with a tyrosine-phosphorylated peptide from the T-cell receptor.
Proc.Natl.Acad.Sci.USA, 92, 1995
4MWI
DownloadVisualize
BU of 4mwi by Molmil
Crystal structure of the human MLKL pseudokinase domain
分子名称: (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, GLYCEROL, Mixed lineage kinase domain-like protein
著者Czabotar, P.E, Murphy, J.M.
登録日2013-09-25
公開日2013-12-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Insights into the evolution of divergent nucleotide-binding mechanisms among pseudokinases revealed by crystal structures of human and mouse MLKL.
Biochem.J., 457, 2014
1SLW
DownloadVisualize
BU of 1slw by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; NICKEL-BOUND
分子名称: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
著者Brinen, L.S, Fletterick, R.J.
登録日1996-02-07
公開日1996-07-11
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
4LGN
DownloadVisualize
BU of 4lgn by Molmil
The structure of Acidothermus cellulolyticus family 74 glycoside hydrolase
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Cellulose-binding, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2013-06-28
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure of Acidothermus cellulolyticus family 74 glycoside hydrolase at 1.82 angstrom resolution.
Acta Crystallogr.,Sect.F, 69, 2013
1KKV
DownloadVisualize
BU of 1kkv by Molmil
NMR Solution Structure of d(CCACGCGTGG)2, parent to G-T mismatch structure
分子名称: 5'-D(*CP*CP*AP*CP*GP*CP*GP*TP*GP*G)-3'
著者Isaacs, R.J, Spielmann, H.P.
登録日2001-12-10
公開日2002-06-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural differences in the NOE-derived structure of G-T mismatched DNA relative to normal DNA are correlated with differences in (13)C relaxation-based internal dynamics.
J.Mol.Biol., 319, 2002
7UAK
DownloadVisualize
BU of 7uak by Molmil
Structure of recombinantly assembled A53E alpha-synuclein fibrils
分子名称: Alpha-synuclein
著者Zhou, K, Zhou, H.
登録日2022-03-13
公開日2023-03-29
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Cryo-EM structure of amyloid fibril formed by alpha-synuclein hereditary A53E mutation reveals a distinct protofilament interface.
J.Biol.Chem., 299, 2023
7WWW
DownloadVisualize
BU of 7www by Molmil
Crystal Structure of Moonlighting GAPDH protein of Lactobacillus gasseri
分子名称: 1,2-ETHANEDIOL, Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Jeng, W.Y, Chen, P.C, Wang, J.Y.
登録日2022-02-14
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Moonlighting GAPDH protein of Lactobacillus gasseri attenuates allergic asthma via immunometabolism change in macrophages
To Be Published
4K6Z
DownloadVisualize
BU of 4k6z by Molmil
The Jak1 kinase domain in complex with compound 37
分子名称: (1R,2S)-2-{[8-oxo-2-(1H-pyrazol-4-yl)-5,8-dihydropyrido[3,4-d]pyrimidin-4-yl]amino}cyclopentanecarbonitrile, Tyrosine-protein kinase JAK1
著者Fong, R, Lupardus, P.J.
登録日2013-04-16
公開日2013-10-02
最終更新日2013-10-23
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Design and evaluation of novel 8-oxo-pyridopyrimidine Jak1/2 inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4K77
DownloadVisualize
BU of 4k77 by Molmil
JAK1 kinase (JH1 domain) in complex with compound 6
分子名称: 4-(cyclohexylamino)pyrido[3,4-d]pyrimidin-8(7H)-one, Tyrosine-protein kinase JAK1
著者Eigenbrot, C, Shia, S.
登録日2013-04-16
公開日2013-10-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Design and evaluation of novel 8-oxo-pyridopyrimidine Jak1/2 inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4NJT
DownloadVisualize
BU of 4njt by Molmil
Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
著者Yedidi, R.S, Garimella, H, Chang, S.B, Kaufman, J.D, Das, D, Wingfield, P.T, Ghosh, A.K, Mitsuya, H.
登録日2013-11-11
公開日2014-04-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Conserved Hydrogen-Bonding Network of P2 bis-Tetrahydrofuran-Containing HIV-1 Protease Inhibitors (PIs) with a Protease Active-Site Amino Acid Backbone Aids in Their Activity against PI-Resistant HIV.
Antimicrob.Agents Chemother., 58, 2014
4NJU
DownloadVisualize
BU of 4nju by Molmil
Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with tipranavir
分子名称: N-(3-{(1R)-1-[(6R)-4-HYDROXY-2-OXO-6-PHENETHYL-6-PROPYL-5,6-DIHYDRO-2H-PYRAN-3-YL]PROPYL}PHENYL)-5-(TRIFLUOROMETHYL)-2-PYRIDINESULFONAMIDE, Protease
著者Yedidi, R.S, Garimella, H, Kaufman, J.D, Das, D, Wingfield, P.T, Mitsuya, H.
登録日2013-11-11
公開日2014-04-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Conserved Hydrogen-Bonding Network of P2 bis-Tetrahydrofuran-Containing HIV-1 Protease Inhibitors (PIs) with a Protease Active-Site Amino Acid Backbone Aids in Their Activity against PI-Resistant HIV.
Antimicrob.Agents Chemother., 58, 2014
1KKW
DownloadVisualize
BU of 1kkw by Molmil
NMR Solution Structure of d(CCATGCGTGG)2, G-T mismatch structure
分子名称: 5'-D(*CP*CP*AP*TP*GP*CP*GP*TP*GP*G)-3'
著者Isaacs, R.J, Spielmann, H.P.
登録日2001-12-10
公開日2002-06-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural differences in the NOE-derived structure of G-T mismatched DNA relative to normal DNA are correlated with differences in (13)C relaxation-based internal dynamics.
J.Mol.Biol., 319, 2002

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon