Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6AVK
DownloadVisualize
BU of 6avk by Molmil
Streptavidin bound to peptide-like compound KPM-6
分子名称: 1-hydroxydodecan-4-one, N-[(2H-1,3-benzodioxol-5-yl)methyl]-2-({[(2H-1,3-benzodioxol-5-yl)methyl][2-(chloromethyl)-1,3-oxazole-4-carbonyl]amino}methyl)-N-[(4-carbamoyl-1,3-oxazol-2-yl)methyl]-1,3-oxazole-4-carboxamide, Streptavidin
著者Park, H, Shamim, R, McEnaney, P, Kodadek, T.
登録日2017-09-02
公開日2018-08-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Efficient Workflow for Screening DNA-encoded One Bead One Compound Libraries Using a Flow Cytometer
To be Published
6SAI
DownloadVisualize
BU of 6sai by Molmil
NMR solution structure of Hml-2 C-terminal dimer domain
分子名称: Gag protein
著者Nicastro, G, Taylor, I.A, Ball, N.J, Ramos, A.
登録日2019-07-16
公開日2020-01-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
5WY0
DownloadVisualize
BU of 5wy0 by Molmil
Crystal structure of the methyltranferase domain of human HEN1 in complex with AdoMet
分子名称: S-ADENOSYLMETHIONINE, Small RNA 2'-O-methyltransferase
著者Peng, L, Ma, J.B, Wu, L.G, Huang, Y.
登録日2017-01-10
公開日2018-01-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Identification of substrates of the small RNA methyltransferase Hen1 in mouse spermatogonial stem cells and analysis of its methyl-transfer domain
J. Biol. Chem., 293, 2018
5WA8
DownloadVisualize
BU of 5wa8 by Molmil
Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant nucleoside L-Ala phosphoramidate substrate complex
分子名称: CHLORIDE ION, Histidine triad nucleotide-binding protein 1, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-~{N}-[(2~{S})-1-methoxy-1-oxidanylidene-propan-2-yl]phosphonamidic acid
著者Maize, K.M, Finzel, B.C.
登録日2017-06-26
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides.
Mol. Pharm., 14, 2017
2QIL
DownloadVisualize
BU of 2qil by Molmil
TOXIC SHOCK SYNDROME TOXIN-1 AT 2.07 A RESOLUTION
分子名称: TOXIC SHOCK SYNDROME TOXIN-1
著者Acharya, K.R, Papageorgiou, A.C.
登録日1997-03-27
公開日1997-08-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The refined crystal structure of toxic shock syndrome toxin-1 at 2.07 A resolution.
J.Mol.Biol., 260, 1996
4KEH
DownloadVisualize
BU of 4keh by Molmil
Crosslinked Crystal Structure of Type II Fatty Synthase Dehydratase, FabA, and Acyl Carrier Protein, AcpP
分子名称: Acyl carrier protein, N-{3-[DIHYDROXY(NONYL)-LAMBDA~4~-SULFANYL]PROPYL}-N~3~-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANINAMIDE, N-{3-[dihydroxy(nonyl)-lambda~4~-sulfanyl]propyl}-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
著者Nguyen, C, Haushalter, R, Finzel, K, Leong, J, Le, B.C, Burkart, M, Tsai, S.C.
登録日2013-04-25
公開日2013-12-25
最終更新日2014-01-29
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Trapping the dynamic acyl carrier protein in fatty acid biosynthesis.
Nature, 505, 2014
1STE
DownloadVisualize
BU of 1ste by Molmil
STAPHYLOCOCCAL ENTEROTOXIN C2 FROM STAPHYLOCOCCUS AUREUS
分子名称: STAPHYLOCOCCAL ENTEROTOXIN C2, ZINC ION
著者Acharya, K.R, Papageorgiou, A.C.
登録日1995-08-21
公開日1996-12-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the superantigen enterotoxin C2 from Staphylococcus aureus reveals a zinc-binding site.
Structure, 3, 1995
4KSS
DownloadVisualize
BU of 4kss by Molmil
Crystal Structure of Vibrio cholerae ATPase GspsE Hexamer
分子名称: Type II secretion system protein E, hemolysin-coregulated protein
著者Hol, W.G, Turley, S, Lu, C.Y, Park, Y.J.
登録日2013-05-17
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (7.58 Å)
主引用文献Hexamers of the Type II Secretion ATPase GspE from Vibrio cholerae with Increased ATPase Activity.
Structure, 21, 2013
3RJZ
DownloadVisualize
BU of 3rjz by Molmil
X-ray crystal structure of the putative n-type atp pyrophosphatase from pyrococcus furiosus, the northeast structural genomics target pfr23
分子名称: N-type ATP pyrophosphatase superfamily
著者Forouhar, F, Lee, I, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-04-16
公開日2011-05-11
最終更新日2012-01-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A large conformational change in the putative ATP pyrophosphatase PF0828 induced by ATP binding.
Acta Crystallogr.,Sect.F, 67, 2011
4LMX
DownloadVisualize
BU of 4lmx by Molmil
Light harvesting complex PE555 from the cryptophyte Hemiselmis andersenii CCMP644
分子名称: 15,16-DIHYDROBILIVERDIN, PHYCOERYTHROBILIN, cryptophyte phycoerythrin (alpha-1 chain), ...
著者Harrop, S.J, Wilk, K.E, Curmi, P.M.G.
登録日2013-07-11
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Single-residue insertion switches the quaternary structure and exciton states of cryptophyte light-harvesting proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LMS
DownloadVisualize
BU of 4lms by Molmil
Light harvesting complex PC645 from the cryptophyte Chroomonas sp. CCMP270
分子名称: 15,16-DIHYDROBILIVERDIN, HEXAETHYLENE GLYCOL, PHYCOCYANOBILIN, ...
著者Harrop, S.J, Wilk, K.E, Curmi, P.M.G.
登録日2013-07-11
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Single-residue insertion switches the quaternary structure and exciton states of cryptophyte light-harvesting proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LM6
DownloadVisualize
BU of 4lm6 by Molmil
Light harvesting complex PC612 from the cryptophyte Hemiselmis virescens M1635
分子名称: 15,16-DIHYDROBILIVERDIN, PHYCOCYANOBILIN, cryptophyte phycocyanin alpha chain, ...
著者Harrop, S.J, Wilk, K.E, Curmi, P.M.G.
登録日2013-07-10
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Single-residue insertion switches the quaternary structure and exciton states of cryptophyte light-harvesting proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
1QIL
DownloadVisualize
BU of 1qil by Molmil
INACTIVE MUTANT TOXIC SHOCK SYNDROME TOXIN-1 AT 2.5 A
分子名称: TOXIC SHOCK SYNDROME TOXIN-1
著者Acharya, K.R, Papageorgiou, A.C.
登録日1997-03-27
公開日1997-08-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a biologically inactive mutant of toxic shock syndrome toxin-1 at 2.5 A resolution.
Protein Sci., 5, 1996
1V6O
DownloadVisualize
BU of 1v6o by Molmil
Peanut lectin complexed with 10mer peptide (PVRIWSSATG)
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION
著者Kundhavai Natchiar, S, Arockia Jeyaprakash, A, Ramya, T.N.C, Thomas, C.J, Suguna, K, Surolia, A, Vijayan, M.
登録日2003-12-02
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural plasticity of peanut lectin: an X-ray analysis involving variation in pH, ligand binding and crystal structure.
Acta Crystallogr.,Sect.D, 60, 2004
1UNS
DownloadVisualize
BU of 1uns by Molmil
IDENTIFICATION OF A SECONDARY ZINC-BINDING SITE IN STAPHYLOCOCCAL ENTEROTOXIN C2: IMPLICATIONS FOR SUPERANTIGEN RECOGNITION
分子名称: ENTEROTOXIN TYPE C-2, ZINC ION
著者Papageorgiou, A.C, Baker, M.D, McLeod, J.D, Goda, S, Sansom, D.M, Tranter, H.S, Acharya, K.R.
登録日2003-09-15
公開日2003-11-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of a Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications for Superantigen Recognition
J.Biol.Chem., 279, 2004
1V6N
DownloadVisualize
BU of 1v6n by Molmil
Peanut lectin with 9mer peptide (PVIWSSATG)
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION
著者Kundhavai Natchiar, S, Arockia Jeyaprakash, A, Ramya, T.N.C, Thomas, C.J, Suguna, K, Surolia, A, Vijayan, M.
登録日2003-12-02
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural plasticity of peanut lectin: an X-ray analysis involving variation in pH, ligand binding and crystal structure.
Acta Crystallogr.,Sect.D, 60, 2004
1V6M
DownloadVisualize
BU of 1v6m by Molmil
Peanut Lectin with 9mer peptide (IWSSAGNVA)
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION
著者Kundhavai Natchiar, S, Arockia Jeyaprakash, A, Ramya, T.N.C, Thomas, C.J, Suguna, K, Surolia, A, Vijayan, M.
登録日2003-12-02
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural plasticity of peanut lectin: an X-ray analysis involving variation in pH, ligand binding and crystal structure.
Acta Crystallogr.,Sect.D, 60, 2004
7KMG
DownloadVisualize
BU of 7kmg by Molmil
LY-CoV555 neutralizing antibody against SARS-CoV-2
分子名称: GLYCEROL, LY-CoV555 Fab heavy chain, LY-CoV555 Fab light chain, ...
著者Hendle, J, Pustilnik, A, Sauder, J.M, Coleman, K.A, Boyles, J.S, Dickinson, C.D.
登録日2020-11-02
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献The neutralizing antibody, LY-CoV555, protects against SARS-CoV-2 infection in nonhuman primates.
Sci Transl Med, 13, 2021
7KMH
DownloadVisualize
BU of 7kmh by Molmil
LY-CoV488 neutralizing antibody against SARS-CoV-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, LY-CoV488 Fab heavy chain, ...
著者Hendle, J, Pustilnik, A, Sauder, J.M, Boyles, J.S, Dickinson, C.D, Coleman, K.A.
登録日2020-11-02
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The neutralizing antibody, LY-CoV555, protects against SARS-CoV-2 infection in nonhuman primates.
Sci Transl Med, 13, 2021
7L3N
DownloadVisualize
BU of 7l3n by Molmil
SARS-CoV 2 Spike Protein bound to LY-CoV555
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LY-CoV555 Fab heavy chain, ...
著者Goldsmith, J.A, McLellan, J.S.
登録日2020-12-18
公開日2021-02-03
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献LY-CoV555, a rapidly isolated potent neutralizing antibody, provides protection in a non-human primate model of SARS-CoV-2 infection.
Biorxiv, 2020
7L0N
DownloadVisualize
BU of 7l0n by Molmil
Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity
分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Snell, G, Czudnochowski, N, Dillen, J, Nix, J.C, Croll, T.I, Corti, D.
登録日2020-12-11
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity.
Cell, 184, 2021
7KMI
DownloadVisualize
BU of 7kmi by Molmil
LY-CoV481 neutralizing antibody against SARS-CoV-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, LY-CoV481 Fab heavy chain, ...
著者Hendle, J, Pustilnik, A, Sauder, J.M, Coleman, K.A, Boyles, J.S, Dickinson, C.D.
登録日2020-11-02
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献The neutralizing antibody, LY-CoV555, protects against SARS-CoV-2 infection in nonhuman primates.
Sci Transl Med, 13, 2021
7JY1
DownloadVisualize
BU of 7jy1 by Molmil
Structure of HbA with compound 19
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, CARBON MONOXIDE, Hemoglobin subunit alpha, ...
著者Jasti, J.
登録日2020-08-28
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献PF-07059013: A Noncovalent Modulator of Hemoglobin for Treatment of Sickle Cell Disease.
J.Med.Chem., 64, 2021
7JXZ
DownloadVisualize
BU of 7jxz by Molmil
Structure of HbA with compound (S)-4
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 3-{(1S)-1-[5-fluoro-2-(1H-pyrazol-1-yl)phenyl]ethoxy}-5-(3-methyl-1H-pyrazol-4-yl)pyridin-2-amine, CARBON MONOXIDE, ...
著者Jasti, J.
登録日2020-08-28
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献PF-07059013: A Noncovalent Modulator of Hemoglobin for Treatment of Sickle Cell Disease.
J.Med.Chem., 64, 2021
7JY3
DownloadVisualize
BU of 7jy3 by Molmil
Structure of HbA with compound 23 (PF-07059013)
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 6-{(1S)-1-[(2-amino-6-fluoroquinolin-3-yl)oxy]ethyl}-5-(1H-pyrazol-1-yl)pyridin-2(1H)-one, Hemoglobin subunit alpha, ...
著者Jasti, J.
登録日2020-08-28
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献PF-07059013: A Noncovalent Modulator of Hemoglobin for Treatment of Sickle Cell Disease.
J.Med.Chem., 64, 2021

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon