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4DXI
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BU of 4dxi by Molmil
Crystal Structure of an Ancestor of All Faviina Proteins
分子名称: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
著者Kim, H, Wachter, R.M.
登録日2012-02-27
公開日2013-02-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins.
Structure, 23, 2015
7VWX
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BU of 7vwx by Molmil
CryoEM structure of football-shaped GroEL:ES2 with RuBisCO
分子名称: Chaperonin GroEL, Co-chaperonin GroES, Ribulose bisphosphate carboxylase
著者Kim, H, Roh, S.H.
登録日2021-11-12
公開日2022-01-12
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Cryo-EM structures of GroEL:ES 2 with RuBisCO visualize molecular contacts of encapsulated substrates in a double-cage chaperonin.
Iscience, 25, 2022
1BPN
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BU of 1bpn by Molmil
DIFFERENTIATION AND IDENTIFICATION OF THE TWO CATALYTIC METAL BINDING SITES IN BOVINE LENS LEUCINE AMINOPEPTIDASE BY X-RAY CRYSTALLOGRAPHY
分子名称: LEUCINE AMINOPEPTIDASE, ZINC ION
著者Kim, H, Lipscomb, W.N.
登録日1993-03-02
公開日1993-07-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Differentiation and identification of the two catalytic metal binding sites in bovine lens leucine aminopeptidase by x-ray crystallography.
Proc.Natl.Acad.Sci.USA, 90, 1993
1BLL
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BU of 1bll by Molmil
X-RAY CRYSTALLOGRAPHIC DETERMINATION OF THE STRUCTURE OF BOVINE LENS LEUCINE AMINOPEPTIDASE COMPLEXED WITH AMASTATIN: FORMULATION OF A CATALYTIC MECHANISM FEATURING A GEM-DIOLATE TRANSITION STATE
分子名称: AMASTATIN, LEUCINE AMINOPEPTIDASE, ZINC ION
著者Kim, H, Lipscomb, W.N.
登録日1993-03-02
公開日1994-01-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray crystallographic determination of the structure of bovine lens leucine aminopeptidase complexed with amastatin: formulation of a catalytic mechanism featuring a gem-diolate transition state.
Biochemistry, 32, 1993
1BPM
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BU of 1bpm by Molmil
DIFFERENTIATION AND IDENTIFICATION OF THE TWO CATALYTIC METAL BINDING SITES IN BOVINE LENS LEUCINE AMINOPEPTIDASE BY X-RAY CRYSTALLOGRAPHY
分子名称: LEUCINE AMINOPEPTIDASE, MAGNESIUM ION, ZINC ION
著者Kim, H, Lipscomb, W.N.
登録日1993-03-02
公開日1993-07-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Differentiation and identification of the two catalytic metal binding sites in bovine lens leucine aminopeptidase by x-ray crystallography.
Proc.Natl.Acad.Sci.USA, 90, 1993
1GYP
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BU of 1gyp by Molmil
CRYSTAL STRUCTURE OF GLYCOSOMAL GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM LEISHMANIA MEXICANA: IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN AND A NEW POSITION FOR THE INORGANIC PHOSPHATE BINDING SITE
分子名称: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION
著者Kim, H, Feil, I.K, Verlinde, C.L.M.J, Petra, P.H, Hol, W.G.J.
登録日1995-08-01
公開日1995-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of glycosomal glyceraldehyde-3-phosphate dehydrogenase from Leishmania mexicana: implications for structure-based drug design and a new position for the inorganic phosphate binding site.
Biochemistry, 34, 1995
1J32
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BU of 1j32 by Molmil
Aspartate Aminotransferase from Phormidium lapideum
分子名称: PYRIDOXAL-5'-PHOSPHATE, aspartate aminotransferase
著者Kim, H, Sawa, Y, Hamada, K.
登録日2003-01-17
公開日2003-02-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural studies of aspartate aminotransferase from Phormidium lapideum
To be Published
7X15
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BU of 7x15 by Molmil
Crystal structure of MIGA2 LD targeting domain
分子名称: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, FORMIC ACID, Mitoguardin 2
著者Kim, H, Lee, C.
登録日2022-02-23
公開日2022-09-14
実験手法X-RAY DIFFRACTION (2.852 Å)
主引用文献Structural basis for mitoguardin-2 mediated lipid transport at ER-mitochondrial membrane contact sites.
Nat Commun, 13, 2022
7X14
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BU of 7x14 by Molmil
Crystal structure of phospho-FFAT motif of MIGA2 bound to VAPB
分子名称: MIGA2 phospho FFAT motif, SULFATE ION, Vesicle-associated membrane protein-associated protein B
著者Kim, H, Lee, C.
登録日2022-02-23
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.675 Å)
主引用文献Structural basis for mitoguardin-2 mediated lipid transport at ER-mitochondrial membrane contact sites.
Nat Commun, 13, 2022
6NBA
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BU of 6nba by Molmil
Crystal structure of Human Cystathionine gamma lyase with S-3-Carboxpropyl-L-Cysteine
分子名称: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine gamma-lyase
著者Kim, H, Yadav, P.K, Banerjee, R, Cho, U.-S.
登録日2018-12-06
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献S-3-Carboxypropyl-l-cysteine specifically inhibits cystathionine gamma-lyase-dependent hydrogen sulfide synthesis.
J.Biol.Chem., 294, 2019
8GTG
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BU of 8gtg by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-I-152 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N},~{N}-bis(2-methoxyethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTI
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BU of 8gti by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C205 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N}-butyl-~{N}-(cyclopropylmethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1, ...
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTM
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BU of 8gtm by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C203 by XFEL
分子名称: 7-(4-bromanyl-2,6-dimethoxy-phenyl)-4,8-dimethyl-~{N},~{N}-bis[4,4,4-tris(fluoranyl)butyl]-1$l^{4},3,5,9-tetrazabicyclo[4.3.0]nona-1(6),2,4,8-tetraen-2-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
5X90
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BU of 5x90 by Molmil
Structure of DotL(656-783)-IcmS-IcmW-LvgA derived from Legionella pneumophila
分子名称: Hypothetical virulence protein, IcmO (DotL), IcmS, ...
著者Kim, H, Kwak, M.J, Kim, J.D, Kim, Y.G, Oh, B.H.
登録日2017-03-04
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
4ZG0
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BU of 4zg0 by Molmil
Crystal structure of Mouse Syndesmos protein
分子名称: Protein syndesmos
著者Lee, I, Kim, H, Yoo, J, Cho, H, Lee, W.
登録日2015-04-22
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Crystal structure of syndesmos and its interaction with Syndecan-4 proteoglycan
Biochem.Biophys.Res.Commun., 463, 2015
5XHW
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BU of 5xhw by Molmil
Crystal structure of HddC from Yersinia pseudotuberculosis
分子名称: Putative 6-deoxy-D-mannoheptose pathway protein, SULFATE ION
著者Park, J, Kim, H, Kim, S, Shin, D.H.
登録日2017-04-24
公開日2018-04-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of d-glycero-alpha-d-manno-heptose-1-phosphate guanylyltransferase from Yersinia pseudotuberculosis.
Biochim. Biophys. Acta, 1866, 2018
4GCV
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BU of 4gcv by Molmil
Structure of a Putative transcription factor (PA1374)from Pseudomonas aeruginosa
分子名称: GLYCEROL, PHOSPHATE ION, Putative transcription protein, ...
著者Choe, J, Kim, H.
登録日2012-07-31
公開日2013-07-24
最終更新日2013-07-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The X-ray crystal structure of PA1374 from Pseudomonas aeruginosa, a putative oxidative-stress sensing transcriptional regulator.
Biochem.Biophys.Res.Commun., 431, 2013
8YBE
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BU of 8ybe by Molmil
Cryo-EM structure of Maltose Binding Protein
分子名称: Maltose/maltodextrin-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yoo, Y, Park, K, Kim, H.
登録日2024-02-13
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Atomic resolution structure of MBP using Cryo-EM
To Be Published
1Y0Q
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BU of 1y0q by Molmil
Crystal structure of an active group I ribozyme-product complex
分子名称: 5'-R(*GP*CP*UP*U)-3', Group I ribozyme, MAGNESIUM ION, ...
著者Golden, B.L, Kim, H, Chase, E.
登録日2004-11-16
公開日2004-12-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structure of a phage Twort group I ribozyme-product complex
Nat.Struct.Mol.Biol., 12, 2005
8KHO
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BU of 8kho by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two Cobalt ions and Methionine
分子名称: COBALT (II) ION, METHIONINE, Methionine aminopeptidase 1D, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHN
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BU of 8khn by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two cobalt ions
分子名称: COBALT (II) ION, Methionine aminopeptidase 1D, mitochondrial, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHM
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BU of 8khm by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form
分子名称: GLYCEROL, Methionine aminopeptidase 1D, mitochondrial, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
7N99
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BU of 7n99 by Molmil
SDE2 SAP domain apo structure
分子名称: Isoform 2 of Replication stress response regulator SDE2
著者Paung, Y, Weinheimer, A.S, Rageul, J, Khan, A, Ho, B, Tong, M, Alphonse, S, Seeliger, M.A, Kim, H.
登録日2021-06-17
公開日2022-10-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Extended DNA-binding interfaces beyond the canonical SAP domain contribute to the function of replication stress regulator SDE2 at DNA replication forks.
J.Biol.Chem., 298, 2022
7V8V
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BU of 7v8v by Molmil
Crystal structure of PsEst3 S128A mutant
分子名称: esterase
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8U
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Crystal structure of PsEst3 wild-type
分子名称: Esterase, NITROBENZENE, SULFATE ION
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023

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