Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1BC4
DownloadVisualize
BU of 1bc4 by Molmil
THE SOLUTION STRUCTURE OF A CYTOTOXIC RIBONUCLEASE FROM THE OOCYTES OF RANA CATESBEIANA (BULLFROG), NMR, 15 STRUCTURES
分子名称: RIBONUCLEASE
著者Chang, C.-F, Chen, C, Chen, Y.-C, Hom, K, Huang, R.-F, Huang, T.
登録日1998-05-05
公開日1998-10-14
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献The solution structure of a cytotoxic ribonuclease from the oocytes of Rana catesbeiana (bullfrog).
J.Mol.Biol., 283, 1998
1M07
DownloadVisualize
BU of 1m07 by Molmil
RESIDUES INVOLVED IN THE CATALYSIS AND BASE SPECIFICITY OF CYTOTOXIC RIBONUCLEASE FROM BULLFROG (RANA CATESBEIANA)
分子名称: 5'-D(*AP*CP*GP*A)-3', Ribonuclease
著者Leu, Y.-J, Chern, S.-S, Wang, S.-C, Hsiao, Y.-Y, Amiraslanov, I, Liaw, Y.-C, Liao, Y.-D.
登録日2002-06-12
公開日2003-01-21
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Residues involved in the catalysis, base specificity, and cytotoxicity of ribonuclease from Rana catesbeiana based upon mutagenesis and X-ray crystallography
J.Biol.Chem., 278, 2003
6IDW
DownloadVisualize
BU of 6idw by Molmil
GH6 Orpinomyces sp. Y102 enzyme
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, GLYCEROL, ...
著者Tsai, L.C, Huang, H.C.
登録日2018-09-11
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal structures of the GH6 Orpinomyces sp. Y102 CelC7 enzyme with exo and endo activity and its complex with cellobiose.
Acta Crystallogr D Struct Biol, 75, 2019
1KM9
DownloadVisualize
BU of 1km9 by Molmil
The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
分子名称: PHOSPHATE ION, RIBONUCLEASE, OOCYTES
著者Chern, S.-S, Musayev, F.N, Amiraslanov, I.R, Liao, Y.-D, Liaw, Y.-C.
登録日2001-12-14
公開日2003-09-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
To be Published
1KM8
DownloadVisualize
BU of 1km8 by Molmil
The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
分子名称: PHOSPHATE ION, RIBONUCLEASE, OOCYTES
著者Chern, S.-S, Musayev, F.N, Amiraslanov, I.R, Liao, Y.-D, Liaw, Y.-C.
登録日2001-12-14
公開日2003-09-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
To be Published
5JX5
DownloadVisualize
BU of 5jx5 by Molmil
GH6 Orpinomyces sp. Y102 enzyme
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Tsai, L.C, Huang, H.C.
登録日2016-05-12
公開日2017-05-17
最終更新日2019-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of GH6 Orpinomyces sp. Y102 CelC7 enzyme with exo- and endo- activity in a complex with cellobiose
Acta Crystallogr.,Sect.D, 2019
7LVN
DownloadVisualize
BU of 7lvn by Molmil
Solution structure of tarantula toxin omega-Avsp1a
分子名称: Omega-Avsp1a
著者Chin, Y.K.Y, Herzig, V, King, G.F.
登録日2021-02-26
公開日2022-03-02
最終更新日2023-10-11
実験手法SOLUTION NMR
主引用文献The Tarantula Toxin omega-Avsp1a Specifically Inhibits Human Ca V 3.1 and Ca V 3.3 via the Extracellular S3-S4 Loop of the Domain 1 Voltage-Sensor.
Biomedicines, 10, 2022
7EQV
DownloadVisualize
BU of 7eqv by Molmil
Crystal structure of JMJD2A complexed with 3,4-dihydroxybenzoic acid
分子名称: 3,4-DIHYDROXYBENZOIC ACID, CHLORIDE ION, Lysine-specific demethylase 4A, ...
著者Fang, W.-K, Yang, S.-M, Wang, W.-C.
登録日2021-05-04
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Natural product myricetin is a pan-KDM4 inhibitor which with poly lactic-co-glycolic acid formulation effectively targets castration-resistant prostate cancer.
J.Biomed.Sci., 29, 2022
7LTN
DownloadVisualize
BU of 7ltn by Molmil
Crystal structure of Mpro in complex with inhibitor CDD-1713
分子名称: 2-[4-(1~{H}-indazol-4-yl)-2-methanoyl-6-methoxy-phenoxy]-~{N},~{N}-dimethyl-ethanamide, 3C-like proteinase
著者Lu, S, Palzkill, T, Matzuk, M, Young, D, Melek, N, Chamakuri, S.
登録日2021-02-19
公開日2021-11-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献DNA-encoded chemistry technology yields expedient access to SARS-CoV-2 M pro inhibitors.
Proc.Natl.Acad.Sci.USA, 118, 2021
2M0K
DownloadVisualize
BU of 2m0k by Molmil
3D Structure of Calmodulin and Calmodulin Binding Domain of Rat Olfactory Cyclic Nucleotide-Gated Ion Channel
分子名称: CALCIUM ION, Calmodulin, Peptide from Cyclic nucleotide-gated olfactory channel
著者Deli, I, Chyan, C.
登録日2012-10-29
公開日2013-10-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Binding orientation and specificity of calmodulin to rat olfactory cyclic nucleotide-gated ion channel.
J.Biomol.Struct.Dyn., 31, 2013
2M0J
DownloadVisualize
BU of 2m0j by Molmil
3D Structure of Calmodulin and Calmodulin binding domain of Olfactory cyclic nucleotide-gated ion channel complex
分子名称: CALCIUM ION, Calmodulin, Peptide from Cyclic nucleotide-gated olfactory channel
著者Deli, I, Chyan, C.
登録日2012-10-29
公開日2013-10-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Binding orientation and specificity of calmodulin to rat olfactory cyclic nucleotide-gated ion channel
J.Biomol.Struct.Dyn., 31, 2013
7VUE
DownloadVisualize
BU of 7vue by Molmil
Structural insight of the molecular mechanism of cilofexor bound to FXR
分子名称: 2-[3-[4-[[3-[2,6-bis(chloranyl)phenyl]-5-cyclopropyl-1,2-oxazol-4-yl]methoxy]-2-chloranyl-phenyl]-3-oxidanyl-azetidin-1-yl]pyridine-4-carboxylic acid, Bile acid receptor, Peptide from Nuclear receptor coactivator 2
著者Jiang, L, Chen, Y.C.
登録日2021-11-02
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Structural insight into the molecular mechanism of cilofexor binding to the farnesoid X receptor.
Biochem.Biophys.Res.Commun., 595, 2022
6OQI
DownloadVisualize
BU of 6oqi by Molmil
CDK2 in complex with Cpd14 (5-fluoro-4-(4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl)-N-(5-(4-methylpiperazin-1-yl)pyridin-2-yl)pyrimidin-2-amine)
分子名称: 5-fluoro-N-[5-(4-methylpiperazin-1-yl)pyridin-2-yl]-4-[(4S)-4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl]pyrimidin-2-amine, Cyclin-dependent kinase 2
著者Murray, J.M.
登録日2019-04-26
公開日2020-07-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design of a brain-penetrant CDK4/6 inhibitor for glioblastoma.
Bioorg.Med.Chem.Lett., 29, 2019
6OQO
DownloadVisualize
BU of 6oqo by Molmil
CDK6 in complex with Cpd24 N-(5-(6-ethyl-2,6-diazaspiro[3.3]heptan-2-yl)pyridin-2-yl)-5-fluoro-4-(4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl)pyrimidin-2-amine
分子名称: Cyclin-dependent kinase 6, N-[5-(6-ethyl-2,6-diazaspiro[3.3]heptan-2-yl)pyridin-2-yl]-5-fluoro-4-[(4R)-4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl]pyrimidin-2-amine
著者Murray, J.M, Boenig, G.D.L.
登録日2019-04-26
公開日2020-07-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.977 Å)
主引用文献Design of a brain-penetrant CDK4/6 inhibitor for glioblastoma.
Bioorg.Med.Chem.Lett., 29, 2019
6OQL
DownloadVisualize
BU of 6oql by Molmil
CDK6 in complex with Cpd13 (R)-5-fluoro-4-(4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl)-N-(5-(4-methylpiperazin-1-yl)pyridin-2-yl)pyrimidin-2-amine
分子名称: 5-fluoro-N-[5-(4-methylpiperazin-1-yl)pyridin-2-yl]-4-[(4R)-4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl]pyrimidin-2-amine, Cyclin-dependent kinase 6
著者Murray, J.M.
登録日2019-04-26
公開日2020-07-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.707 Å)
主引用文献Design of a brain-penetrant CDK4/6 inhibitor for glioblastoma.
Bioorg.Med.Chem.Lett., 29, 2019
7URB
DownloadVisualize
BU of 7urb by Molmil
Sars-Cov2 Main Protease in complex with CDD-1733
分子名称: (2P)-2-(isoquinolin-4-yl)-1-[(1s,3R)-3-(methylcarbamoyl)cyclobutyl]-N-{(1S)-1-[4-(trifluoromethyl)phenyl]butyl}-1H-benzimidazole-7-carboxamide, 3C-like proteinase
著者Lu, S, Palzkill, T, Matzuk, M.M, Judge, A.
登録日2022-04-21
公開日2023-07-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors.
Commun Chem, 6, 2023
7UR9
DownloadVisualize
BU of 7ur9 by Molmil
SARS-Cov2 Main protease in complex with inhibitor CDD-1845
分子名称: (2P)-2-(isoquinolin-4-yl)-1-[4-(methylamino)-4-oxobutyl]-N-[(1S)-1-(naphthalen-2-yl)ethyl]-1H-benzimidazole-7-carboxamide, 3C-like proteinase nsp5
著者Lu, S, Palzkill, T.
登録日2022-04-21
公開日2023-07-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors.
Commun Chem, 6, 2023
7US4
DownloadVisualize
BU of 7us4 by Molmil
Sars-Cov2 Main Protease in complex with CDD-1819
分子名称: (2P)-2-(isoquinolin-4-yl)-1-[(1s,3R)-3-(methylcarbamoyl)cyclobutyl]-N-[(1S)-1-(naphthalen-2-yl)ethyl]-1H-benzimidazole-7-carboxamide, 3C-like proteinase
著者Lu, S, Palzkill, T, Matzuk, M.M, Judge, A.
登録日2022-04-22
公開日2023-07-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors.
Commun Chem, 6, 2023
8U89
DownloadVisualize
BU of 8u89 by Molmil
The structure of the PP2A-B56Delta holoenzyme mutant - E197K
分子名称: MANGANESE (II) ION, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Wu, C.G, Xing, Y.
登録日2023-09-16
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献B56 delta long-disordered arms form a dynamic PP2A regulation interface coupled with global allostery and Jordan's syndrome mutations.
Proc.Natl.Acad.Sci.USA, 121, 2024
8U1X
DownloadVisualize
BU of 8u1x by Molmil
The structure of the PP2A-B56Delta holoenzyme mutant - E197K
分子名称: MANGANESE (II) ION, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
著者Wu, C.G, Xing, Y.
登録日2023-09-04
公開日2024-01-17
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献B56 delta long-disordered arms form a dynamic PP2A regulation interface coupled with global allostery and Jordan's syndrome mutations.
Proc.Natl.Acad.Sci.USA, 121, 2024
6CAD
DownloadVisualize
BU of 6cad by Molmil
Crystal structure of RAF kinase domain bound to the inhibitor 2a
分子名称: 1-(propan-2-yl)-3-({3-[3-(trifluoromethyl)phenyl]isoquinolin-8-yl}ethynyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Serine/threonine-protein kinase B-raf
著者Maisonneuve, P, Kurinov, I, Assadieskandar, A, Yu, C, Liu, X, Chen, Y.-C, Prakash, G.K.S, Zhang, C, SIcheri, F.
登録日2018-01-30
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Effects of rigidity on the selectivity of protein kinase inhibitors.
Eur J Med Chem, 146, 2018
5W0T
DownloadVisualize
BU of 5w0t by Molmil
Crystal structure of monomeric Msp1 from S. cerevisiae
分子名称: 1,2-ETHANEDIOL, Protein MSP1
著者Keenan, R.J, Wohlever, M.L, Mateja, A.M.
登録日2017-05-31
公開日2017-08-02
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Msp1 Is a Membrane Protein Dislocase for Tail-Anchored Proteins.
Mol. Cell, 67, 2017
3K53
DownloadVisualize
BU of 3k53 by Molmil
Crystal Structure of NFeoB from P. furiosus
分子名称: Ferrous iron transport protein b
著者Eng, E.T, Dong, G, Unger, V.M.
登録日2009-10-06
公開日2010-05-26
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural fold, conservation and Fe(II) binding of the intracellular domain of prokaryote FeoB.
J.Struct.Biol., 170, 2010
7TYQ
DownloadVisualize
BU of 7tyq by Molmil
TEAD2 bound to Compound 1
分子名称: Transcriptional enhancer factor TEF-4, ethyl (8S)-7-oxo-5-[4-(trifluoromethyl)phenyl]-4,7-dihydropyrazolo[1,5-a]pyrimidine-3-carboxylate
著者Noland, C.L, Fong, R.
登録日2022-02-14
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Novel mechanism of YAP-TEAD inhibition results in targeted chromatin remodeling and reveals an expanded Hippo dependent landscape in cancers
To Be Published
7TYU
DownloadVisualize
BU of 7tyu by Molmil
TEAD2 bound to Compound 2
分子名称: (3R)-1-[(8S)-5-(4-cyclohexylphenyl)-7-oxo-4,7-dihydropyrazolo[1,5-a]pyrimidine-3-carbonyl]pyrrolidine-3-carbonitrile, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Transcriptional enhancer factor TEF-4
著者Noland, C.L, Fong, R.
登録日2022-02-14
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Novel mechanism of YAP-TEAD inhibition results in targeted chromatin remodeling and reveals an expanded Hippo dependent landscape in cancers
To Be Published

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon