Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8SUR
DownloadVisualize
BU of 8sur by Molmil
TMEM16F bound with Niclosamide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-chloro-N-(2-chloro-4-nitrophenyl)-2-hydroxybenzamide, ...
著者Feng, S, Cheng, Y.
登録日2023-05-13
公開日2023-09-06
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Identification of a drug binding pocket in TMEM16F calcium-activated ion channel and lipid scramblase.
Nat Commun, 14, 2023
8TAG
DownloadVisualize
BU of 8tag by Molmil
TMEM16F, with Calcium and PIP2, no inhibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anoctamin-6, CALCIUM ION
著者Feng, S, Cheng, Y.
登録日2023-06-27
公開日2023-09-06
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Identification of a drug binding pocket in TMEM16F calcium-activated ion channel and lipid scramblase.
Nat Commun, 14, 2023
4OI3
DownloadVisualize
BU of 4oi3 by Molmil
Crystal structure analysis of SCO4226 from Streptomyces coelicolor A3(2)
分子名称: Nickel responsive protein
著者Lu, M, Jiang, Y.L, Wang, S, Cheng, W, Zhang, R.G, Virolle, M.J, Chen, Y, Zhou, C.Z.
登録日2014-01-18
公開日2014-09-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Streptomyces coelicolor SCO4226 Is a Nickel Binding Protein.
Plos One, 9, 2014
8SUN
DownloadVisualize
BU of 8sun by Molmil
TMEM16F 1PBC
分子名称: 1-Hydroxy-3-(trifluoromethyl)pyrido[1,2-a]benzimidazole-4-carbonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, Anoctamin-6, ...
著者Wu, H, Feng, S, Cheng, Y.
登録日2023-05-12
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Identification of a drug binding pocket in TMEM16F calcium-activated ion channel and lipid scramblase.
Nat Commun, 14, 2023
8TAI
DownloadVisualize
BU of 8tai by Molmil
TMEM16F, with Calcium and PIP2, no inhibitor, Cl2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anoctamin-6, CALCIUM ION
著者Wu, H, Feng, S, Cheng, Y.
登録日2023-06-27
公開日2023-09-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Identification of a drug binding pocket in TMEM16F calcium-activated ion channel and lipid scramblase.
Nat Commun, 14, 2023
8TAL
DownloadVisualize
BU of 8tal by Molmil
TMEM16F, with Calcium and PIP2, no inhibitor, Cl1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anoctamin-6, CALCIUM ION
著者Wu, H, Feng, S, Cheng, Y.
登録日2023-06-27
公開日2023-09-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Identification of a drug binding pocket in TMEM16F calcium-activated ion channel and lipid scramblase.
Nat Commun, 14, 2023
4ERG
DownloadVisualize
BU of 4erg by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, FE (III) ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-20
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.789 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
4ERI
DownloadVisualize
BU of 4eri by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, MAGNESIUM ION, ZINC ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-20
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.0006 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
4EPK
DownloadVisualize
BU of 4epk by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, MAGNESIUM ION, ZINC ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-17
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6009 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
3Q2C
DownloadVisualize
BU of 3q2c by Molmil
Binding properties to HLA class I molecules and the structure of the leukocyte Ig-like receptor A3 (LILRA3/ILT6/LIR4/CD85e)
分子名称: Leukocyte immunoglobulin-like receptor subfamily A member 3
著者Ryu, M, Chen, Y, Qi, J.X, Liu, J, Shi, Y, Cheng, H, Gao, G.F.
登録日2010-12-20
公開日2011-07-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献LILRA3 binds both classical and non-classical HLA class I molecules but with reduced affinities compared to LILRB1/LILRB2: structural evidence
Plos One, 6, 2011
4ERA
DownloadVisualize
BU of 4era by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, COBALT (II) ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-19
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
1RW2
DownloadVisualize
BU of 1rw2 by Molmil
Three-dimensional structure of Ku80 CTD
分子名称: ATP-dependent DNA helicase II, 80 kDa subunit
著者Zhang, Z, Hu, W, Cano, L, Lee, T.D, Chen, D.J, Chen, Y.
登録日2003-12-15
公開日2003-12-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the C-terminal domain of Ku80 suggests important sites for protein-protein interactions.
STRUCTURE, 12, 2004
8HBM
DownloadVisualize
BU of 8hbm by Molmil
Structural basis of the farnesoid X receptor/retinoid X receptor heterodimer on inverted repeat DNA
分子名称: Bile acid receptor, DNA (5'-D(P*CP*CP*GP*AP*GP*GP*TP*CP*AP*AP*TP*GP*AP*CP*CP*TP*CP*G)-3'), DNA (5'-D(P*CP*CP*GP*AP*GP*GP*TP*CP*AP*TP*TP*GP*AP*CP*CP*TP*CP*G)-3'), ...
著者Jiang, L, Chen, Y.
登録日2022-10-29
公開日2023-06-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis of the farnesoid X receptor/retinoid X receptor heterodimer on inverted repeat DNA.
Comput Struct Biotechnol J, 21, 2023
4FKZ
DownloadVisualize
BU of 4fkz by Molmil
Crystal structure of Bacillus subtilis UDP-GlcNAc 2-epimerase in complex with UDP-GlcNAc and UDP
分子名称: UDP-N-acetylglucosamine 2-epimerase, URIDINE-5'-DIPHOSPHATE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Yang, C.S, Chen, S.C, Kuan, S.M, Chen, Y.R, Liu, Y.H, Chen, Y.
登録日2012-06-14
公開日2013-05-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal structure of Bacillus subtilis UDP-GlcNAc 2-epimerase in complex with UDP-GlcNAc and UDP
To be Published
1IG6
DownloadVisualize
BU of 1ig6 by Molmil
HUMAN MRF-2 DOMAIN, NMR, 11 STRUCTURES
分子名称: MODULATOR RECOGNITION FACTOR 2
著者Lin, D, Tsui, V, Case, D, Yuan, Y.C, Chen, Y.
登録日2001-04-17
公開日2001-04-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献HUMAN MRF-2 DOMAIN, NMR, 11 STRUCTURES
To be Published
5BND
DownloadVisualize
BU of 5bnd by Molmil
Crystal structure of the C-terminal domain of TagH
分子名称: ABC transporter, ATP-binding protein
著者Chen, S.C, Chen, Y.
登録日2015-05-26
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献SH3-Like Motif-Containing C-terminal Domain of Staphylococcal Teichoic Acid Transporter Suggests Possible Function.
Proteins, 2016
8DDI
DownloadVisualize
BU of 8ddi by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166N Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Jacobs, L.M.C, Chen, Y.
登録日2022-06-18
公開日2022-08-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A yeast-based system to study SARS-CoV-2 Mpro structure and to identify nirmatrelvir resistant mutations.
Plos Pathog., 19, 2023
8DDM
DownloadVisualize
BU of 8ddm by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166R Mutant in Complex with Inhibitor GC376
分子名称: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
著者Lewandowski, E.M, Chen, Y.
登録日2022-06-18
公開日2022-08-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献A yeast-based system to study SARS-CoV-2 Mpro structure and to identify nirmatrelvir resistant mutations.
Plos Pathog., 19, 2023
8DGB
DownloadVisualize
BU of 8dgb by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Q192T Mutant in Complex with Inhibitor GC376
分子名称: (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
著者Lewandowski, E.M, Jacobs, L.M.C, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-23
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
8DCZ
DownloadVisualize
BU of 8dcz by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) M165Y Mutant in Complex with Nirmatrelvir
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-17
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
6K5E
DownloadVisualize
BU of 6k5e by Molmil
Crystal structure of BioH from Klebsiella pneumonia
分子名称: Pimeloyl-[acyl-carrier protein] methyl ester esterase
著者Wang, L, Chen, Y.
登録日2019-05-28
公開日2019-07-17
最終更新日2020-05-06
実験手法X-RAY DIFFRACTION (2.257 Å)
主引用文献Structural insight into the carboxylesterase BioH from Klebsiella pneumoniae.
Biochem.Biophys.Res.Commun., 520, 2019
7RN0
DownloadVisualize
BU of 7rn0 by Molmil
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun9-57-3R
分子名称: (2R)-2-{acetyl[4-(1H-pyrrol-1-yl)phenyl]amino}-N-[(1S)-1-phenylethyl]-2-(pyridin-3-yl)acetamide, 3C-like proteinase, GLYCEROL
著者Sacco, M, Chen, Y.
登録日2021-07-28
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Discovery of Di- and Trihaloacetamides as Covalent SARS-CoV-2 Main Protease Inhibitors with High Target Specificity.
J.Am.Chem.Soc., 143, 2021
7RN1
DownloadVisualize
BU of 7rn1 by Molmil
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun9-62-2R
分子名称: 3C-like proteinase, GLYCEROL, N-([1,1'-biphenyl]-4-yl)-2-chloro-N-[(1R)-2-oxo-2-{[(1S)-1-phenylethyl]amino}-1-(pyridin-3-yl)ethyl]acetamide, ...
著者Sacco, M, Chen, Y.
登録日2021-07-28
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of Di- and Trihaloacetamides as Covalent SARS-CoV-2 Main Protease Inhibitors with High Target Specificity.
J.Am.Chem.Soc., 143, 2021
8DD1
DownloadVisualize
BU of 8dd1 by Molmil
SARS-CoV-2 Main Protease (Mpro) H164N Mutant in Complex with Inhibitor GC376
分子名称: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
著者Lewandowski, E.M, Butler, S.G, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-17
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
8DFN
DownloadVisualize
BU of 8dfn by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H164N Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Butler, S.G, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-22
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon