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5NPZ
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BU of 5npz by Molmil
Porcine (Sus scrofa) Major Histocompatibility Complex, class I, presenting EFEDLTFLA
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
著者Rizkallah, P.J, Tungatt, K, Sewell, A.K.
登録日2017-04-19
公開日2018-05-02
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig.
Plos Pathog., 14, 2018
5O40
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BU of 5o40 by Molmil
SOD1 bound to Ebselen
分子名称: N-phenyl-2-selanylbenzamide, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
著者Capper, M.J, Wright, G.S.A, Antonyuk, S.V, Hasnain, S.S.
登録日2017-05-25
公開日2018-06-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The cysteine-reactive small molecule ebselen facilitates effective SOD1 maturation.
Nat Commun, 9, 2018
3ORN
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BU of 3orn by Molmil
Mitogen-activated protein kinase kinase 1 (MEK1) in complex with CH4987655 and MgAMP-PNP
分子名称: 3,4-difluoro-2-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)-5-[(3-oxo-1,2-oxazinan-2-yl)methyl]benzamide, Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, ...
著者Lukacs, C.M, Janson, C, Schuck, V, Belunis, C.
登録日2010-09-07
公開日2011-03-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Design and synthesis of novel allosteric MEK inhibitor CH4987655 as an orally available anticancer agent.
Bioorg.Med.Chem.Lett., 21, 2011
3OS3
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BU of 3os3 by Molmil
Mitogen-activated protein kinase kinase 1 (MEK1) in complex with CH4858061 and MgATP
分子名称: 2-[(4-ethynyl-2-fluorophenyl)amino]-3,4-difluoro-N-(2-hydroxyethoxy)-5-{[(2-hydroxyethoxy)imino]methyl}benzamide, ADENOSINE-5'-TRIPHOSPHATE, Dual specificity mitogen-activated protein kinase kinase 1, ...
著者Lukacs, C.M, Janson, C, Schuck, V, Belunis, C.
登録日2010-09-08
公開日2011-07-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Design and synthesis of novel allosteric MEK inhibitor CH4987655 as an orally available anticancer agent.
Bioorg.Med.Chem.Lett., 21, 2011
2PNL
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BU of 2pnl by Molmil
Crystal structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P1
分子名称: GUANIDINE, Protease VP4
著者Paetzel, M, Lee, J, Feldman, A.R, Delmas, B.
登録日2007-04-24
公開日2007-06-05
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction.
J.Biol.Chem., 282, 2007
2PNM
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BU of 2pnm by Molmil
Crystal Structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P6122
分子名称: Protease VP4
著者Paetzel, M, Lee, J, Feldman, A.R, Delmas, B.
登録日2007-04-24
公開日2007-06-05
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction.
J.Biol.Chem., 282, 2007
8D3Y
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BU of 8d3y by Molmil
Human alpha3 Na+/K+-ATPase in its exoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3X
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BU of 8d3x by Molmil
Human alpha3 Na+/K+-ATPase in its K+-occluded state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3U
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BU of 8d3u by Molmil
Human alpha3 Na+/K+-ATPase in its Na+-occluded state
分子名称: ADENOSINE-5'-DIPHOSPHATE, FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3W
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BU of 8d3w by Molmil
Human alpha3 Na+/K+-ATPase in its AMPPCP-bound cytoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Sodium/potassium-transporting ATPase subunit alpha-3, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3V
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BU of 8d3v by Molmil
Human alpha3 Na+/K+-ATPase in its cytoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
6SL6
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BU of 6sl6 by Molmil
p53 charged core
分子名称: Cellular tumor antigen p53, GLYCEROL, ZINC ION
著者Gallardo, R, Langenberg, T, Schymkowitz, J, Rousseau, F, Ulens, C.
登録日2019-08-18
公開日2020-03-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Thermodynamic and Evolutionary Coupling between the Native and Amyloid State of Globular Proteins.
Cell Rep, 31, 2020
6T7Z
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BU of 6t7z by Molmil
KEAP1 IN COMPLEX WITH COMPOUND 44
分子名称: ACE-CYS-ASA-4FB-GLU-THR-GLY-GLU-CYS-NH2, ACETATE ION, Kelch-like ECH-associated protein 1
著者Colarusso, S.
登録日2019-10-23
公開日2020-09-09
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Optimization of linear and cyclic peptide inhibitors of KEAP1-NRF2 protein-protein interaction.
Bioorg.Med.Chem., 28, 2020
2VXX
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BU of 2vxx by Molmil
X-ray structure of DpsA from Thermosynechococcus elongatus
分子名称: DI(HYDROXYETHYL)ETHER, FE (III) ION, STARVATION INDUCED DNA BINDING PROTEIN, ...
著者Franceschini, S, Ilari, A.
登録日2008-07-14
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Thermosynechococcus Elongatus Dpsa Binds Zn(II) at a Unique Three Histidine-Containing Ferroxidase Center and Utilizes O2 as Iron Oxidant with Very High Efficiency, Unlike the Typical Dps Proteins.
FEBS J., 277, 2010
6T7V
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BU of 6t7v by Molmil
KEAP1 IN COMPLEX WITH PEPTIDE 8
分子名称: ACETATE ION, Kelch-like ECH-associated protein 1, LEU-ASP-PRO-GLU-THR-GLY-GLU-PHE-LEU
著者Colarusso, S.
登録日2019-10-23
公開日2020-09-09
最終更新日2020-10-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Optimization of linear and cyclic peptide inhibitors of KEAP1-NRF2 protein-protein interaction.
Bioorg.Med.Chem., 28, 2020
7UMM
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BU of 7umm by Molmil
H1 Solomon Islands 2006 hemagglutinin in complex with Ab109
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Windsor, I.W, Caradonna, T.M, Schmidt, A.G.
登録日2022-04-07
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献An epitope-enriched immunogen expands responses to a conserved viral site.
Cell Rep, 41, 2022
7UVF
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BU of 7uvf by Molmil
Crystal structure of ZED8 Fab complex with CD8 alpha
分子名称: CHLORIDE ION, GLYCEROL, Immunoglobulin heavy chain, ...
著者Yu, C, Davies, C, Koerber, J.T, Williams, S.
登録日2022-05-01
公開日2022-10-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Preclinical development of ZED8, an 89 Zr immuno-PET reagent for monitoring tumor CD8 status in patients undergoing cancer immunotherapy.
Eur J Nucl Med Mol Imaging, 50, 2023
7XAD
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BU of 7xad by Molmil
Crystal strucutre of PD-L1 and DBL2_02 designed protein binder
分子名称: DBL2_02 binder, Programmed cell death 1 ligand 1
著者Liu, K.F, Xu, Z.P, Han, P, Pacesa, M, Gao, G.F, Chai, Y, Tan, S.G.
登録日2022-03-17
公開日2023-04-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献De novo design of protein interactions with learned surface fingerprints.
Nature, 617, 2023
1ZAK
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BU of 1zak by Molmil
ADENYLATE KINASE FROM MAIZE IN COMPLEX WITH THE INHIBITOR P1,P5-BIS(ADENOSINE-5'-)PENTAPHOSPHATE (AP5A)
分子名称: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
著者Wild, K, Schulz, G.E.
登録日1997-05-31
公開日1998-04-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure, catalysis and supramolecular assembly of adenylate kinase from maize.
Eur.J.Biochem., 250, 1997
7XVY
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BU of 7xvy by Molmil
Human Estrogen Receptor beta Ligand-binding Domain in Complex with S-DPN
分子名称: (2~{S})-2,3-bis(4-hydroxyphenyl)propanenitrile, Estrogen receptor beta, Nuclear receptor coactivator 1
著者Furuya, N, Handa, C.
登録日2022-05-25
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.544 Å)
主引用文献Evaluating the correlation of binding affinities between isothermal titration calorimetry and fragment molecular orbital method of estrogen receptor beta with diarylpropionitrile (DPN) or DPN derivatives.
J.Steroid Biochem.Mol.Biol., 222, 2022
7XWR
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BU of 7xwr by Molmil
Human Estrogen Receptor beta Ligand-binding Domain in Complex with (S)-2-(2-chloro-4-hydroxyphenyl)-3-(4-hydroxyphenyl)propanenitrile
分子名称: (2~{S})-2-(2-chloranyl-4-oxidanyl-phenyl)-3-(4-hydroxyphenyl)propanenitrile, Estrogen receptor beta, SRC peptide
著者Furuya, N, Handa, C.
登録日2022-05-27
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.164 Å)
主引用文献Evaluating the correlation of binding affinities between isothermal titration calorimetry and fragment molecular orbital method of estrogen receptor beta with diarylpropionitrile (DPN) or DPN derivatives.
J.Steroid Biochem.Mol.Biol., 222, 2022
7XWQ
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BU of 7xwq by Molmil
Human Estrogen Receptor beta Ligand-binding Domain in Complex with (R)-2-(2-chloro-4-hydroxyphenyl)-3-(4-hydroxyphenyl)propanenitrile
分子名称: (2~{R})-2-(2-chloranyl-4-oxidanyl-phenyl)-3-(4-hydroxyphenyl)propanenitrile, Estrogen receptor beta, SRC peptide
著者Furuya, N, Handa, C.
登録日2022-05-27
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Evaluating the correlation of binding affinities between isothermal titration calorimetry and fragment molecular orbital method of estrogen receptor beta with diarylpropionitrile (DPN) or DPN derivatives.
J.Steroid Biochem.Mol.Biol., 222, 2022
7XWP
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BU of 7xwp by Molmil
Human Estrogen Receptor beta Ligand-binding Domain in Complex with (S)-3-(2-chloro-4-hydroxyphenyl)-2-(4-hydroxyphenyl)propanenitrile
分子名称: (2~{S})-3-(2-chloranyl-4-oxidanyl-phenyl)-2-(4-hydroxyphenyl)propanenitrile, Estrogen receptor beta, SRC peptide
著者Furuya, N, Handa, C.
登録日2022-05-27
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.919 Å)
主引用文献Evaluating the correlation of binding affinities between isothermal titration calorimetry and fragment molecular orbital method of estrogen receptor beta with diarylpropionitrile (DPN) or DPN derivatives.
J.Steroid Biochem.Mol.Biol., 222, 2022
7XVZ
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BU of 7xvz by Molmil
Human Estrogen Receptor beta Ligand-binding Domain in Complex with (R)-3-(2-chloro-4-hydroxyphenyl)-2-(4-hydroxyphenyl)propanenitrile
分子名称: (2~{R})-3-(2-chloranyl-4-oxidanyl-phenyl)-2-(4-hydroxyphenyl)propanenitrile, Estrogen receptor beta, SRC peptide
著者Furuya, N, Handa, C.
登録日2022-05-25
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Evaluating the correlation of binding affinities between isothermal titration calorimetry and fragment molecular orbital method of estrogen receptor beta with diarylpropionitrile (DPN) or DPN derivatives.
J.Steroid Biochem.Mol.Biol., 222, 2022
7XYQ
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BU of 7xyq by Molmil
Crystal strucutre of PD-L1 and the computationally designed DBL1_03 protein binder
分子名称: ARGININE, CD274 molecule, DBL1_03
著者Liu, K, Xu, Z, Han, P, Pacesa, M, Gao, G.F, Chai, Y, Tan, S.
登録日2022-06-02
公開日2023-04-12
最終更新日2023-05-17
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献De novo design of protein interactions with learned surface fingerprints.
Nature, 617, 2023

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