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2RUG
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BU of 2rug by Molmil
Refined solution structure of the first RNA recognition motif domain in CPEB3
分子名称: Cytoplasmic polyadenylation element-binding protein 3
著者Tsuda, K, Kuwasako, K, Nagata, T, Takahashi, M, Kigawa, T, Kobayashi, N, Guntert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2014-04-15
公開日2014-09-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Novel RNA recognition motif domain in the cytoplasmic polyadenylation element binding protein 3.
Proteins, 82, 2014
1WNF
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BU of 1wnf by Molmil
Crystal Structure of PH0066 from Pyrococcus horikoshii
分子名称: 1,2-ETHANEDIOL, L-asparaginase
著者Ihsanawati, Sekine, S, Murayama, K, Sugawara, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-08-02
公開日2005-02-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of PH0066 from Pyrococcus horikoshii
To be Published
2RNL
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BU of 2rnl by Molmil
Solution structure of the EGF-like domain from human Amphiregulin
分子名称: Amphiregulin
著者Qin, X, Hayashi, F, Terada, T, Shirouzu, M, Watanabe, S, Kigawa, T, Yabuta, N, Nojima, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-01-11
公開日2009-01-20
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Solution structure of the EGF-like domain from human Amphiregulin
To be Published
2ROK
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BU of 2rok by Molmil
Solution structure of the cap-binding domain of PARN complexed with the cap analog
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, poly(A)-specific ribonuclease
著者Nagata, T, Suzuki, S, Endo, R, Shirouzu, M, Terada, T, Inoue, M, Kigawa, T, Guntert, P, Hayashizaki, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-03-28
公開日2009-02-10
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition.
Nucleic Acids Res., 36, 2008
2RQ4
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Refinement of RNA binding domain 3 in CUG triplet repeat RNA-binding protein 1
分子名称: CUG-BP- and ETR-3-like factor 1
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Terada, T, Kobayashi, N, Shirouzu, M, Kigawa, T, Guntert, P, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-01-19
公開日2009-08-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3
Nucleic Acids Res., 2009
1X0A
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BU of 1x0a by Molmil
Crystal Structure of type II malate/lactate dehydrogenase from thermus thermophilus HB8
分子名称: FORMIC ACID, SODIUM ION, malate/L-lactate dehydrogenase family protein
著者Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-03-16
公開日2006-03-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of type II malate/lactate dehydrogenase from thermus thermophilus HB8
To be Published
1WO8
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Crystal structure of methylglyoxal synthase from Thermus thermophilus HB8
分子名称: SULFATE ION, methylglyoxal synthase
著者Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-08-12
公開日2005-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of methylglyoxal synthase from Thermus thermophilus HB8
To be Published
1WMM
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Crystal structure of PH1033 from Pyrococcus horikoshii Ot3
分子名称: Hypothetical UPF0310 protein PH1033
著者Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-12
公開日2005-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Nucleant-mediated protein crystallization with the application of microporous synthetic zeolites.
Acta Crystallogr.,Sect.D, 64, 2008
1WX1
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Crystal structure of nictinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase from Thermus thermophilus HB8
分子名称: SODIUM ION, nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
著者Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-19
公開日2005-02-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of nictinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase from Thermus thermophilus HB8
To be Published
1WD7
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Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-2 crystal)
分子名称: Uroporphyrinogen III Synthase
著者Mizohata, E, Matsuura, T, Sakai, H, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-12
公開日2004-11-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-2 crystal)
to be published
1WZ2
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The crystal structure of Leucyl-tRNA synthetase and tRNA(leucine) complex
分子名称: Leucyl-tRNA synthetase, tRNA
著者Fukunaga, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-21
公開日2005-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献The crystal structure of Leucyl-tRNA synthetase and tRNA(leucine) complex
to be published
1WX0
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Crystal structure of transaldolase from Thermus thermophilus HB8
分子名称: transaldolase
著者Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-19
公開日2005-02-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of transaldolase from Thermus thermophilus HB8
To be Published
2ROR
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BU of 2ror by Molmil
Solution structure of the VAV1 SH2 domain complexed with a tyrosine-phosphorylated peptide from SLP76
分子名称: 15-meric peptide from Lymphocyte cytosolic protein 2, Proto-oncogene vav
著者Tanaka, M, Kasai, T, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-08
公開日2009-04-21
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Solution structure of the VAV1 SH2 domain complexed with a tyrosine-phosphorylated peptide from SLP76
To be Published
2RRB
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BU of 2rrb by Molmil
Refinement of RNA binding domain in human Tra2 beta protein
分子名称: cDNA FLJ40872 fis, clone TUTER2000283, highly similar to Homo sapiens transformer-2-beta (SFRS10) gene
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Sugano, S, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-17
公開日2011-04-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
2U2F
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BU of 2u2f by Molmil
SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN OF HU2AF65
分子名称: PROTEIN (SPLICING FACTOR U2AF 65 KD SUBUNIT)
著者Ito, T, Muto, Y, Green, M.R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-05-26
公開日1999-08-20
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structures of the first and second RNA-binding domains of human U2 small nuclear ribonucleoprotein particle auxiliary factor (U2AF(65)).
EMBO J., 18, 1999
1WMW
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Crystal structure of geranulgeranyl diphosphate synthase from Thermus thermophilus
分子名称: geranylgeranyl diphosphate synthetase
著者Suto, K, Nishio, K, Nodake, Y, Hamada, K, Kawamoto, M, Nakagawa, N, Kuramitu, S, Miura, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-21
公開日2005-07-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of geranulgeranyl diphosphate synthase from Thermus thermophilus
To be Published
1WY2
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Crystal Structure of the Prolidase from Pyrococcus horikoshii OT3
分子名称: CACODYLATE ION, GLYCEROL, MAGNESIUM ION, ...
著者Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-04
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Prolidase from Pyrococcus horikoshii OT3
To be Published
1WZO
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Crystal Structure of the HpcE from Thermus Thermophilus HB8
分子名称: GLYCEROL, HpcE, SODIUM ION, ...
著者Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-03-08
公開日2006-02-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the HpcE from Thermus Thermophilus HB8
To be Published
1PMS
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BU of 1pms by Molmil
PLECKSTRIN HOMOLOGY DOMAIN OF SON OF SEVENLESS 1 (SOS1) WITH GLYCINE-SERINE ADDED TO THE N-TERMINUS, NMR, 20 STRUCTURES
分子名称: SOS 1
著者Koshiba, S, Kigawa, T, Kim, J, Shirouzu, M, Bowtell, D, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1997-02-18
公開日1997-05-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure of the pleckstrin homology domain of mouse Son-of-sevenless 1 (mSos1).
J.Mol.Biol., 269, 1997
1N78
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Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(Glu) and glutamol-AMP.
分子名称: GLUTAMOL-AMP, Glutamyl-tRNA synthetase, MAGNESIUM ION, ...
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-13
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
1N7K
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Unique tetrameric structure of deoxyribose phosphate aldolase from Aeropyrum pernix
分子名称: deoxyribose-phosphate aldolase
著者Tsuge, H, Sakuraba, H, Shimoya, I, Katunuma, N, Ago, H, Miyano, M, Ohshima, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-15
公開日2003-03-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The First Crystal Structure of Archaeal Aldolase. UNIQUE TETRAMERIC STRUCTURE of 2-DEOXY-D-RIBOSE-5-PHOSPHATE ALDOLASE FROM THE HYPERTHERMOPHILIC ARCHAEA Aeropyrum pernix.
J.Biol.Chem., 278, 2003
1N75
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Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Glutamyl-tRNA synthetase, MAGNESIUM ION
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-12
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
1N77
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Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(Glu) and ATP.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Glutamyl-tRNA synthetase, MAGNESIUM ION, ...
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-13
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
1NZ8
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Solution Structure of the N-utilization substance G (NusG) N-terminal (NGN) domain from Thermus thermophilus
分子名称: TRANSCRIPTION ANTITERMINATION PROTEIN NUSG
著者Reay, P, Yamasaki, K, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-02-17
公開日2004-04-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural and sequence comparisons arising from the solution structure of the transcription elongation factor NusG from Thermus thermophilus
Proteins, 56, 2004
1NZ9
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Solution Structure of the N-utilization substance G (NusG) C-terminal (NGC) domain from Thermus thermophilus
分子名称: TRANSCRIPTION ANTITERMINATION PROTEIN NUSG
著者Reay, P, Yamasaki, K, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-02-17
公開日2004-04-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural and sequence comparisons arising from the solution structure of the transcription elongation factor NusG from Thermus thermophilus
Proteins, 56, 2004

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