6JN8
 
 | | Structure of H216A mutant open form peptidoglycan peptidase | | 分子名称: | Peptidase M23, SULFATE ION, ZINC ION | | 著者 | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | 登録日 | 2019-03-13 | | 公開日 | 2020-01-15 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.106 Å) | | 主引用文献 | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JMZ
 | | Structure of H247A mutant open form peptidoglycan peptidase | | 分子名称: | Peptidase M23, ZINC ION | | 著者 | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | 登録日 | 2019-03-13 | | 公開日 | 2020-01-15 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (1.92 Å) | | 主引用文献 | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JMX
 | | Structure of open form of peptidoglycan peptidase | | 分子名称: | D(-)-TARTARIC ACID, GLYCEROL, Peptidase M23, ... | | 著者 | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | 登録日 | 2019-03-13 | | 公開日 | 2020-01-15 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (1.859 Å) | | 主引用文献 | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JN1
 | | Structure of H247A mutant peptidoglycan peptidase complex with penta peptide | | 分子名称: | C0O-DAL-DAL, Peptidase M23, ZINC ION | | 著者 | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | 登録日 | 2019-03-13 | | 公開日 | 2020-01-15 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.382 Å) | | 主引用文献 | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JN0
 | | Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide | | 分子名称: | C0O-DAL-API, Peptidase M23, ZINC ION | | 著者 | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | 登録日 | 2019-03-13 | | 公開日 | 2020-01-15 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.164 Å) | | 主引用文献 | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JN7
 | | Structure of H216A mutant closed form peptidoglycan peptidase | | 分子名称: | D(-)-TARTARIC ACID, Peptidase M23, ZINC ION | | 著者 | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | 登録日 | 2019-03-13 | | 公開日 | 2020-01-15 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.04 Å) | | 主引用文献 | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JMY
 | | Structure of wild type closed form of peptidoglycan peptidase | | 分子名称: | CITRIC ACID, Peptidase M23, ZINC ION | | 著者 | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | 登録日 | 2019-03-13 | | 公開日 | 2020-01-15 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (1.661 Å) | | 主引用文献 | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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8S5B
 | | Crystal structure of the sulfoquinovosyl binding protein (SmoF) from A. tumefaciens sulfo-SMO pathway in complex with SQOctyl ligand | | 分子名称: | Sulfoquinovosyl glycerol-binding protein SmoF, [(2~{S},3~{S},4~{S},5~{R},6~{S})-6-octoxy-3,4,5-tris(oxidanyl)oxan-2-yl]methanesulfonic acid | | 著者 | Snow, A.J.D, Sharma, M, Davies, G.J. | | 登録日 | 2024-02-23 | | 公開日 | 2024-04-17 | | 最終更新日 | 2024-05-08 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Capture-and-release of a sulfoquinovose-binding protein on sulfoquinovose-modified agarose.
Org.Biomol.Chem., 22, 2024
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6KBM
 | | Crystal structure of Vac8 bound to Atg13 | | 分子名称: | Autophagy-related protein 13, Vacuolar protein 8 | | 著者 | Park, J, Lee, C. | | 登録日 | 2019-06-25 | | 公開日 | 2019-11-27 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.902 Å) | | 主引用文献 | Quaternary structures of Vac8 differentially regulate the Cvt and PMN pathways.
Autophagy, 16, 2020
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6KBN
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8DUA
 | | SIV E660.CR54 SOS-2P Env Trimer with ITS92.02 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, Envelope glycoprotein gp41, ... | | 著者 | Gorman, J, Kwong, P.D. | | 登録日 | 2022-07-27 | | 公開日 | 2022-10-26 | | 最終更新日 | 2022-11-30 | | 実験手法 | ELECTRON MICROSCOPY (4.32 Å) | | 主引用文献 | Cryo-EM structures of prefusion SIV envelope trimer.
Nat.Struct.Mol.Biol., 29, 2022
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8DVD
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8ELI
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8EUW
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8EUV
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8EUU
 | | Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01 FAB | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... | | 著者 | Pletnev, S, Kwong, P. | | 登録日 | 2022-10-19 | | 公開日 | 2023-09-27 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | | 主引用文献 | Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site.
Nat Commun, 14, 2023
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8F7Z
 | | VRC34.01_mm28 bound to fusion peptide | | 分子名称: | HIV-1 Env Fusion Peptide, VRC34_m228 Light Chain, VRC34_mm28 Heavy Chain | | 著者 | Olia, A.S, Kwong, P.D. | | 登録日 | 2022-11-21 | | 公開日 | 2023-11-01 | | 最終更新日 | 2024-02-14 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site.
Nat Commun, 14, 2023
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7O49
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7O4A
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7O4C
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7O4B
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6Z1W
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6Z1X
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7T7G
 | | Imipenem-OXA-23 2 minute complex | | 分子名称: | (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Beta-lactamase OXA-23 | | 著者 | Smith, C.A, Stewart, N.K, Vakulenko, S.B. | | 登録日 | 2021-12-15 | | 公開日 | 2022-05-04 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | C6 Hydroxymethyl-Substituted Carbapenem MA-1-206 Inhibits the Major Acinetobacter baumannii Carbapenemase OXA-23 by Impeding Deacylation.
Mbio, 13, 2022
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7T7F
 | | MA-1-206-OXA-23 25 minute complex | | 分子名称: | (2R,4S)-2-(1,3-dihydroxypropan-2-yl)-4-{[(3R,5R)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Beta-lactamase OXA-23 | | 著者 | Smith, C.A, Stewart, N.K, Vakulenko, S.B. | | 登録日 | 2021-12-15 | | 公開日 | 2022-05-18 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | C6 Hydroxymethyl-Substituted Carbapenem MA-1-206 Inhibits the Major Acinetobacter baumannii Carbapenemase OXA-23 by Impeding Deacylation.
Mbio, 13, 2022
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