Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7N32
DownloadVisualize
BU of 7n32 by Molmil
protofilaments of microtubule doublets bound to outer-arm dynein
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Rao, Q, Zhang, K.
Deposit date:2021-05-31
Release date:2021-09-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.
Nat.Struct.Mol.Biol., 28, 2021
7MWG
DownloadVisualize
BU of 7mwg by Molmil
16-nm repeat microtubule doublet
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Rao, Q, Zhang, K.
Deposit date:2021-05-17
Release date:2021-09-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.
Nat.Struct.Mol.Biol., 28, 2021
7E5R
DownloadVisualize
BU of 7e5r by Molmil
SARS-CoV-2 S trimer with three-antibody cocktail complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FC05 heavy chain, FC05 light chain, ...
Authors:Sun, Y, Wang, L, Wang, N, Feng, R, Wang, X.
Deposit date:2021-02-20
Release date:2021-10-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure-based development of three- and four-antibody cocktails against SARS-CoV-2 via multiple mechanisms.
Cell Res., 31, 2021
7E5S
DownloadVisualize
BU of 7e5s by Molmil
SARS-CoV-2 S trimer with four-antibody cocktail complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FC05 heavy chain, FC05 light chain, ...
Authors:Sun, Y, Wang, L, Wang, N, Feng, R, Wang, X.
Deposit date:2021-02-20
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure-based development of three- and four-antibody cocktails against SARS-CoV-2 via multiple mechanisms.
Cell Res., 31, 2021
5J9K
DownloadVisualize
BU of 5j9k by Molmil
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) in complex with rice D53 repressor EAR peptide motif
Descriptor: Protein TPR1, ZINC ION, rice D53 peptide 794-808
Authors:Ke, J, Ma, H, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K.
Deposit date:2016-04-10
Release date:2017-07-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A D53 repression motif induces oligomerization of TOPLESS corepressors and promotes assembly of a corepressor-nucleosome complex.
Sci Adv, 3, 2017
9BIG
DownloadVisualize
BU of 9big by Molmil
Stat6 bound to degrader AK-1690
Descriptor: Signal transducer and activator of transcription 6, [(2-{[(2S)-1-{(2S,4S)-4-[(7-{2-[(3R)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-4-yl}hept-6-yn-1-yl)oxy]-2-[(2R)-2-phenylmorpholine-4-carbonyl]pyrrolidin-1-yl}-3,3-dimethyl-1-oxobutan-2-yl]carbamoyl}-1-benzothiophen-5-yl)di(fluoro)methyl]phosphonic acid
Authors:Mallik, L, Stuckey, J.A.
Deposit date:2024-04-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (3.304 Å)
Cite:Discovery of AK-1690: A Potent and Highly Selective STAT6 PROTAC Degrader.
J.Med.Chem., 2024
5GZE
DownloadVisualize
BU of 5gze by Molmil
Galectin-8 N-terminal domain carbohydrate recognition domain
Descriptor: Galectin-8, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Su, J.Y, Si, Y.L.
Deposit date:2016-09-28
Release date:2016-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker.
Int J Mol Sci, 17, 2016
7N61
DownloadVisualize
BU of 7n61 by Molmil
structure of C2 projections and MIPs
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FAP147, FAP178, ...
Authors:Han, L, Zhang, K.
Deposit date:2021-06-07
Release date:2022-05-18
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of an active central apparatus.
Nat.Struct.Mol.Biol., 29, 2022
7N6G
DownloadVisualize
BU of 7n6g by Molmil
C1 of central pair
Descriptor: CPC1, Calmodulin, DPY30, ...
Authors:Han, L, Zhang, K.
Deposit date:2021-06-08
Release date:2022-05-18
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of an active central apparatus.
Nat.Struct.Mol.Biol., 29, 2022
6M3B
DownloadVisualize
BU of 6m3b by Molmil
hAPC-c25k23 Fab complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Vitamin K-dependent protein C heavy chain, Vitamin K-dependent protein C light chain, ...
Authors:Wang, X, Li, L, Zhao, X, Egner, U.
Deposit date:2020-03-03
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Targeted inhibition of activated protein C by a non-active-site inhibitory antibody to treat hemophilia.
Nat Commun, 11, 2020
7WRO
DownloadVisualize
BU of 7wro by Molmil
Local structure of BD55-3372 and delta spike
Descriptor: 3372H, 3372L, Spike protein S1
Authors:Liu, P.L.
Deposit date:2022-01-27
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection.
Nature, 608, 2022
7WR8
DownloadVisualize
BU of 7wr8 by Molmil
Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-3152 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BD55-3152H, BD55-3152L, ...
Authors:Du, S, Xiao, J.Y.
Deposit date:2022-01-26
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection.
Nature, 608, 2022
7WRL
DownloadVisualize
BU of 7wrl by Molmil
Local structure of BD55-1239 Fab and SARS-COV2 Omicron RBD complex
Descriptor: BD55-1239H, BD55-1239L, Spike protein S1
Authors:Zhang, Z.Z, Xiao, J.J.
Deposit date:2022-01-27
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection.
Nature, 608, 2022
7WRZ
DownloadVisualize
BU of 7wrz by Molmil
Local resolution of BD55-5840 Fab and SARS-COV2 Omicron RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BD55-5840H, BD55-5840L, ...
Authors:Zhang, Z.Z, Xiao, J.J.
Deposit date:2022-01-28
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection.
Nature, 608, 2022
5JGC
DownloadVisualize
BU of 5jgc by Molmil
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) L111A, L130A, L179A and I195A mutant
Descriptor: Protein TPR1, ZINC ION
Authors:Ke, J, Ma, H, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K.
Deposit date:2016-04-20
Release date:2017-07-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:A D53 repression motif induces oligomerization of TOPLESS corepressors and promotes assembly of a corepressor-nucleosome complex.
Sci Adv, 3, 2017
4GG5
DownloadVisualize
BU of 4gg5 by Molmil
Crystal structure of CMET in complex with novel inhibitor
Descriptor: 3-(4-methylpiperazin-1-yl)-N-(3-nitrobenzyl)-7-(trifluoromethyl)quinolin-5-amine, Hepatocyte growth factor receptor
Authors:Liu, Q.F, Chen, T.T, Xu, Y.C.
Deposit date:2012-08-05
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.423 Å)
Cite:Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: Synthesis and SAR study as tyrosine kinase c-Met inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
4GG7
DownloadVisualize
BU of 4gg7 by Molmil
Crystal structure of cMET in complex with novel inhibitor
Descriptor: Hepatocyte growth factor receptor, N-(3-nitrobenzyl)-6-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]-2-(trifluoromethyl)pyrido[2,3-d]pyrimidin-4-amine
Authors:Liu, Q.F, Chen, T.T, Xu, Y.C.
Deposit date:2012-08-06
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: Synthesis and SAR study as tyrosine kinase c-Met inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
4IN0
DownloadVisualize
BU of 4in0 by Molmil
Crystal Structure of human splicing factor dim2/TXNL4B
Descriptor: Thioredoxin-like protein 4B, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Jin, T.C, Guo, F, Zhang, Y.Z.
Deposit date:2013-01-03
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.327 Å)
Cite:High-resolution crystal structure of human Dim2/TXNL4B.
Acta Crystallogr.,Sect.F, 69, 2013
6J0N
DownloadVisualize
BU of 6j0n by Molmil
Cryo-EM Structure of an Extracellular Contractile Injection System, baseplate in extended state, refined in C6 symmetry
Descriptor: Pvc1, Pvc11, Pvc12, ...
Authors:Jiang, F, Li, N, Wang, X, Cheng, J, Huang, Y, Yang, Y, Yang, J, Cai, B, Wang, Y, Jin, Q, Gao, N.
Deposit date:2018-12-25
Release date:2019-04-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM Structure and Assembly of an Extracellular Contractile Injection System.
Cell, 177, 2019
6J0M
DownloadVisualize
BU of 6j0m by Molmil
Cryo-EM Structure of an Extracellular Contractile Injection System, PVC baseplate in extended state (reconstructed with C3 symmetry)
Descriptor: Pvc8
Authors:Jiang, F, Li, N, Wang, X, Cheng, J, Huang, Y, Yang, Y, Yang, J, Cai, B, Wang, Y, Jin, Q, Gao, N.
Deposit date:2018-12-24
Release date:2019-04-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM Structure and Assembly of an Extracellular Contractile Injection System.
Cell, 177, 2019
7CWS
DownloadVisualize
BU of 7cws by Molmil
SARS-CoV-2 Spike Proteins Trimer in Complex with FC05 and H014 Fabs Cocktail
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of FC05 Fab, ...
Authors:Wang, L, Wang, X.
Deposit date:2020-08-31
Release date:2020-12-16
Last modified:2021-01-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure-based development of human antibody cocktails against SARS-CoV-2.
Cell Res., 31, 2021
2IGL
DownloadVisualize
BU of 2igl by Molmil
Crystal Structure of E. coli YEDX, a transthyretin related protein
Descriptor: Transthyretin-like protein
Authors:Zuo, Y, Malhotra, A.
Deposit date:2006-09-22
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Expression, Purification and Structure Determination of Yedx, a Transthyretin-Related Protein from Escherichia coli
To be Published
8XRU
DownloadVisualize
BU of 8xru by Molmil
The crystal structure of a GH3 enzyme CcBgl3B with glycerol
Descriptor: CALCIUM ION, GH3 enzyme CcBgl3B, GLYCEROL
Authors:Su, J.Y.
Deposit date:2024-01-08
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:A trapped covalent intermediate as a key catalytic element in the hydrolysis of a GH3 beta-glucosidase: An X-ray crystallographic and biochemical study.
Int.J.Biol.Macromol., 265, 2024
8XRX
DownloadVisualize
BU of 8xrx by Molmil
The crystal structure of a GH3 enzyme CcBgl3B with glucose and gentiobiose
Descriptor: CALCIUM ION, GH3 enzyme CcBgl3B, alpha-D-glucopyranose, ...
Authors:Su, J.Y.
Deposit date:2024-01-08
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A trapped covalent intermediate as a key catalytic element in the hydrolysis of a GH3 beta-glucosidase: An X-ray crystallographic and biochemical study.
Int.J.Biol.Macromol., 265, 2024
8XRT
DownloadVisualize
BU of 8xrt by Molmil
The crystal structure of a GH3 enzyme CcBgl3B
Descriptor: CALCIUM ION, GH3 enzyme CcBgl3B
Authors:Su, J.Y.
Deposit date:2024-01-08
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A trapped covalent intermediate as a key catalytic element in the hydrolysis of a GH3 beta-glucosidase: An X-ray crystallographic and biochemical study.
Int.J.Biol.Macromol., 265, 2024

226414

PDB entries from 2024-10-23

PDB statisticsPDBj update infoContact PDBjnumon