Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4E69
DownloadVisualize
BU of 4e69 by Molmil
Crystal structure of a sugar kinase (target EFI-502132) from Oceanicola granulosus, unliganded structure
Descriptor: 1,2-ETHANEDIOL, 2-dehydro-3-deoxygluconokinase, CHLORIDE ION, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-03-15
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a sugar kinase (target EFI-502132) from Oceanicola granulosus, unliganded structure
To be Published
4E5T
DownloadVisualize
BU of 4e5t by Molmil
Crystal structure of a putative Mandelate racemase/Muconate lactonizing enzyme (Target PSI-200750) from Labrenzia alexandrii DFL-11
Descriptor: MAGNESIUM ION, Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein
Authors:Kumar, P.R, Bonanno, J, Chowdhury, S, Foti, R, Gizzi, A, Glen, S, Hammonds, J, Hillerich, B, Matikainen, B, Seidel, R, Toro, R, Zencheck, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-03-14
Release date:2012-03-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a putative MR/ML enzyme from Labrenzia alexandrii DFL-11
to be published
4EB8
DownloadVisualize
BU of 4eb8 by Molmil
Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with DADMe-ImmG and phosphate
Descriptor: 1,2-ETHANEDIOL, 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, ...
Authors:Ho, M.C, Haapalainen, A.M, Suarez, J.J, Almo, S.C, Schramm, V.L.
Deposit date:2012-03-23
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic Site Conformations in Human PNP by (19)F-NMR and Crystallography.
Chem.Biol., 20, 2013
4GP1
DownloadVisualize
BU of 4gp1 by Molmil
Crystal structure of ISOPRENOID SYNTHASE A3MSH1 (TARGET EFI-501992) from pyrobaculum calidifontis complexed with DMAPP
Descriptor: CHLORIDE ION, DIMETHYLALLYL DIPHOSPHATE, Polyprenyl synthetase, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-20
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal Structure of Isoprenoid Synthase from Pyrobaculum Calidifontis
To be Published
4H1Z
DownloadVisualize
BU of 4h1z by Molmil
Crystal structure of putative isomerase from Sinorhizobium meliloti, open loop conformation (target EFI-502104)
Descriptor: CHLORIDE ION, Enolase Q92Zs5, FORMIC ACID, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-09-11
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.012 Å)
Cite:Crystal Structure of Enolase Q92Zs5 (Target EFI-502104) from Sinorhizobium meliloti
To be Published
4H15
DownloadVisualize
BU of 4h15 by Molmil
Crystal Structure of a short chain alcohol dehydrogenase-related dehydrogenase (target ID NYSGRC-011812) from Sinorhizobium meliloti 1021 in space group P21
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-09-10
Release date:2012-09-19
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of a short chain alcohol dehydrogenase-related dehydrogenase (target ID NYSGRC-011812) from Sinorhizobium meliloti 1021 in space group P21
To be Published
4GQA
DownloadVisualize
BU of 4gqa by Molmil
Crystal structure of NAD binding oxidoreductase from Klebsiella pneumoniae
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, NAD binding Oxidoreductase, ...
Authors:Osinski, S, Majorek, K.A, Niedzialkowska, E, Osinski, T, Porebski, P.J, Nawar, A, Hammonds, J, Hillerich, B, Seidel, R, Bonanno, J.B, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-08-22
Release date:2012-09-12
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of NAD binding oxidoreductase from Klebsiella pneumoniae (CASP Target)
To be Published
4F3C
DownloadVisualize
BU of 4f3c by Molmil
Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Salmonella enterica with butyl-thio-DADMe-Immucillin-A
Descriptor: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-[(butylsulfanyl)methyl]pyrrolidin-3-ol, 1,2-ETHANEDIOL, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Authors:Haapalainen, A.M, Thomas, K, Bonanno, J.B, Almo, S.C, Schramm, V.L.
Deposit date:2012-05-09
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Salmonella enterica with butyl-thio-DADMe-Immucillin-A
Structure, 21, 2013
4GXW
DownloadVisualize
BU of 4gxw by Molmil
Crystal structure of a cog1816 amidohydrolase (target EFI-505188) from Burkhoderia ambifaria, with bound Zn
Descriptor: Adenosine deaminase, CHLORIDE ION, ZINC ION
Authors:Vetting, M.W, Goble, A.M, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Raushel, F.M, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-09-04
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of a cog1816 amidohydrolase (target EFI-505188) from Burkhoderia ambifaria, with bound Zn
To be Published
4HCH
DownloadVisualize
BU of 4hch by Molmil
CRYSTAL STRUCTURE OF D-GLUCARATE DEHYDRATASE FROM AGROBACTERIUM TUMEFACIENS complexed with magnesium and L-tartrate
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Isomerase/lactonizing enzyme, ...
Authors:Fedorov, A.A, Fedorov, E.V, Sakai, A, Gerlt, J.A, Almo, S.C.
Deposit date:2012-09-29
Release date:2012-10-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:CRYSTAL STRUCTURE OF D-GLUCARATE DEHYDRATASE FROM AGROBACTERIUM TUMEFACIENS complexed with magnesium and L-tartrate
To be Published
4GRF
DownloadVisualize
BU of 4grf by Molmil
Crystal structure of thioredoxin domain of thiol-disulfide oxidoreductase BVU-2223 (Target EFI-501010) from Bacteroides vulgatus
Descriptor: CHLORIDE ION, GLUTATHIONE, Putative thiol-disulfide oxidoreductase, ...
Authors:Patskovsky, Y, Sampathkumar, P, Toro, R, Bhosle, R, Zencheck, W.D, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Imker, H.J, Hammonds, J, Al-Obaidi, N.F, Stead, M, Love, J, Armstrong, R.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-24
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of thioredoxin domain of thiol-disulfide oxidoreductase BVU-2223 from Bacteroides vulgatus
To be Published
4GWB
DownloadVisualize
BU of 4gwb by Molmil
Crystal structure of putative Peptide methionine sulfoxide reductase from Sinorhizobium meliloti 1021
Descriptor: CALCIUM ION, CHLORIDE ION, Peptide methionine sulfoxide reductase MsrA 3
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Zenchek, W, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-09-01
Release date:2012-09-19
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of putative Peptide methionine sulfoxide reductase from Sinorhizobium meliloti 1021
To be Published
4GXH
DownloadVisualize
BU of 4gxh by Molmil
Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004
Descriptor: CHLORIDE ION, PHOSPHATE ION, Pyrrolidone-carboxylate peptidase
Authors:Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-09-04
Release date:2012-09-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004 (CASP Target)
To be Published
4GYF
DownloadVisualize
BU of 4gyf by Molmil
Crystal structure of histidinol phosphate phosphatase (HISK) from Lactococcus lactis subsp. lactis Il1403 complexed with ZN, L-histidinol and phosphate
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Histidinol-phosphatase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Ghodge, S, Raushel, F.M, Almo, S.C.
Deposit date:2012-09-05
Release date:2013-02-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.647 Å)
Cite:Crystal structure of histidinol phosphate phosphatase (HISK) from Lactococcus lactis subsp. lactis Il1403 complexed with ZN, L-histidinol and phosphate
To be Published
4H16
DownloadVisualize
BU of 4h16 by Molmil
Crystal Structure of a short chain alcohol dehydrogenase-related dehydrogenase (target ID NYSGRC-011812) from Sinorhizobium meliloti 1021 in space group P6422
Descriptor: CHLORIDE ION, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
Authors:Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-09-10
Release date:2012-09-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a short chain alcohol dehydrogenase-related dehydrogenase (target ID NYSGRC-011812) from Sinorhizobium meliloti 1021 in space group P6422
To be Published
3BRS
DownloadVisualize
BU of 3brs by Molmil
Crystal structure of sugar transporter from Clostridium phytofermentans
Descriptor: Periplasmic binding protein/LacI transcriptional regulator
Authors:Malashkevich, V.N, Patskovsky, Y, Toro, R, Meyers, A.J, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-21
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of sugar transporter from Clostridium phytofermentans.
To be Published
3BS4
DownloadVisualize
BU of 3bs4 by Molmil
Crystal structure of uncharacterized protein PH0321 from Pyrococcus horikoshii in complex with an unknown peptide
Descriptor: Uncharacterized protein PH0321, Unknown peptide
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Hu, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-21
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of uncharacterized protein PH0321 from Pyrococcus horikoshii in complex with an unknown peptide.
To be Published
3C6F
DownloadVisualize
BU of 3c6f by Molmil
Crystal structure of protein Bsu07140 from Bacillus subtilis
Descriptor: GLYCEROL, YetF protein
Authors:Patskovsky, Y, Min, T, Zhang, A, Adams, J, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-04
Release date:2008-02-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein Bsu07140 from Bacillus subtilis.
To be Published
3C19
DownloadVisualize
BU of 3c19 by Molmil
Crystal structure of protein MK0293 from Methanopyrus kandleri AV19
Descriptor: GLYCEROL, PHOSPHATE ION, Uncharacterized protein MK0293
Authors:Patskovsky, Y, Romero, R, Bonanno, J.B, Malashkevich, V, Dickey, M, Chang, S, Koss, J, Bain, K, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-22
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein MK0293 from Methanopyrus kandleri AV19.
To be Published
3C97
DownloadVisualize
BU of 3c97 by Molmil
Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae
Descriptor: Signal transduction histidine kinase
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-15
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae.
To be Published
3BOV
DownloadVisualize
BU of 3bov by Molmil
Crystal structure of the receptor binding domain of mouse PD-L2
Descriptor: FORMIC ACID, Programmed cell death 1 ligand 2, SODIUM ION
Authors:Lazar-Molnar, E, Ramagopal, U, Cao, E, Toro, R, Nathenson, S.G, Almo, S.C.
Deposit date:2007-12-17
Release date:2008-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of the complex between programmed death-1 (PD-1) and its ligand PD-L2.
Proc.Natl.Acad.Sci.USA, 105, 2008
3BY5
DownloadVisualize
BU of 3by5 by Molmil
Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58
Descriptor: Cobalamin biosynthesis protein, SULFATE ION
Authors:Patskovsky, Y, Bonanno, J.B, Sojitra, S, Rutter, M, Iizuka, M, Maletic, M, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-15
Release date:2008-01-22
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of cobalamin biosynthesis protein from Agrobacterium tumefaciens str. C58.
To be Published
3C3M
DownloadVisualize
BU of 3c3m by Molmil
Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1
Descriptor: GLYCEROL, Response regulator receiver protein
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Meyer, A.J, Dickey, M, Chang, S, Groshong, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-28
Release date:2008-02-05
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1.
To be Published
3BMA
DownloadVisualize
BU of 3bma by Molmil
Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6
Descriptor: D-alanyl-lipoteichoic acid synthetase, GLYCEROL, SULFATE ION
Authors:Patskovsky, Y, Sridhar, V, Bonanno, J.B, Smith, D, Rutter, M, Iizuka, M, Koss, J, Bain, K, Gheyi, T, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-12
Release date:2007-12-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of probable D-Alanyl-Lipoteichoic Acid Synthetase from Streptococcus pneumoniae.
To be Published
3BT5
DownloadVisualize
BU of 3bt5 by Molmil
Crystal structure of DUF305 fragment from Deinococcus radiodurans
Descriptor: CHLORIDE ION, Uncharacterized protein DUF305
Authors:Ramagopal, U.A, Patskovsky, Y, Rutter, M, Toro, R, Bain, K, Meyer, A.J, Powell, A, Gheyi, T, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-27
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of DUF305 fragment from Deinococcus radiodurans.
To be Published

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon