Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1SLW
DownloadVisualize
BU of 1slw by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; NICKEL-BOUND
Descriptor: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
Authors:Brinen, L.S, Fletterick, R.J.
Deposit date:1996-02-07
Release date:1996-07-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
5UQW
DownloadVisualize
BU of 5uqw by Molmil
Crystal structure of human KRAS G12V mutant in complex with GDP
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Huang, C.S, Kaplan, A, Stockwell, B.R, Tong, L.
Deposit date:2017-02-08
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Multivalent Small-Molecule Pan-RAS Inhibitors.
Cell, 168, 2017
4NJU
DownloadVisualize
BU of 4nju by Molmil
Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with tipranavir
Descriptor: N-(3-{(1R)-1-[(6R)-4-HYDROXY-2-OXO-6-PHENETHYL-6-PROPYL-5,6-DIHYDRO-2H-PYRAN-3-YL]PROPYL}PHENYL)-5-(TRIFLUOROMETHYL)-2-PYRIDINESULFONAMIDE, Protease
Authors:Yedidi, R.S, Garimella, H, Kaufman, J.D, Das, D, Wingfield, P.T, Mitsuya, H.
Deposit date:2013-11-11
Release date:2014-04-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Conserved Hydrogen-Bonding Network of P2 bis-Tetrahydrofuran-Containing HIV-1 Protease Inhibitors (PIs) with a Protease Active-Site Amino Acid Backbone Aids in Their Activity against PI-Resistant HIV.
Antimicrob.Agents Chemother., 58, 2014
4NJT
DownloadVisualize
BU of 4njt by Molmil
Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:Yedidi, R.S, Garimella, H, Chang, S.B, Kaufman, J.D, Das, D, Wingfield, P.T, Ghosh, A.K, Mitsuya, H.
Deposit date:2013-11-11
Release date:2014-04-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A Conserved Hydrogen-Bonding Network of P2 bis-Tetrahydrofuran-Containing HIV-1 Protease Inhibitors (PIs) with a Protease Active-Site Amino Acid Backbone Aids in Their Activity against PI-Resistant HIV.
Antimicrob.Agents Chemother., 58, 2014
1SLU
DownloadVisualize
BU of 1slu by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN
Descriptor: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
Authors:Brinen, L.S, Fletterick, R.J.
Deposit date:1996-02-07
Release date:1996-07-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
5US4
DownloadVisualize
BU of 5us4 by Molmil
Crystal structure of human KRAS G12D mutant in complex with GDP
Descriptor: GLYCEROL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Tran, T, Kaplan, A, Stockwell, B.R, Tong, L.
Deposit date:2017-02-13
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Multivalent Small-Molecule Pan-RAS Inhibitors.
Cell, 168, 2017
5USJ
DownloadVisualize
BU of 5usj by Molmil
Crystal Structure of human KRAS G12D mutant in complex with GDPNP
Descriptor: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Huang, C.S, Kaplan, A, Stockwell, B.R, Tong, L.
Deposit date:2017-02-13
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Multivalent Small-Molecule Pan-RAS Inhibitors.
Cell, 168, 2017
5UWZ
DownloadVisualize
BU of 5uwz by Molmil
Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus
Descriptor: 1,2-ETHANEDIOL, Aldehyde decarbonylase, STEARIC ACID
Authors:Wilson, D.K.
Deposit date:2017-02-21
Release date:2018-02-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus
To Be Published
5WAL
DownloadVisualize
BU of 5wal by Molmil
Identification of an imidazopyridine scaffold to generate potent and selective TYK2 inhibitors that demonstrate activity in an in vivo psoriasis model
Descriptor: N-[2-(2,6-dichlorophenyl)-1H-imidazo[4,5-c]pyridin-4-yl]cyclopropanecarboxamide, Non-receptor tyrosine-protein kinase TYK2
Authors:Ultsch, M.H, Magnuson, S.
Deposit date:2017-06-26
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Identification of an imidazopyridine scaffold to generate potent and selective TYK2 inhibitors that demonstrate activity in an in vivo psoriasis model.
Bioorg. Med. Chem. Lett., 27, 2017
4R0G
DownloadVisualize
BU of 4r0g by Molmil
Crystal structure of Lpg0393 from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Sohn, Y.S, Shin, H.C, Oh, B.H.
Deposit date:2014-07-31
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Lpg0393 of Legionella pneumophila Is a Guanine-Nucleotide Exchange Factor for Rab5, Rab21 and Rab22
Plos One, 10, 2015
5WEV
DownloadVisualize
BU of 5wev by Molmil
Identification of an imidazopyridine scaffold to generate potent and selective TYK2 inhibitors that demonstrate activity in an in vivo psoriasis model
Descriptor: N-[2-(2,6-dichlorophenyl)-1H-imidazo[4,5-c]pyridin-4-yl]cyclopropanecarboxamide, Tyrosine-protein kinase JAK2
Authors:Ultsch, M.H, Magnuson, S.
Deposit date:2017-07-10
Release date:2017-09-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:Identification of an imidazopyridine scaffold to generate potent and selective TYK2 inhibitors that demonstrate activity in an in vivo psoriasis model.
Bioorg. Med. Chem. Lett., 27, 2017
5UQ9
DownloadVisualize
BU of 5uq9 by Molmil
Crystal structure of 6-phosphogluconate dehydrogenase with ((4R,5R)-5-(hydroxycarbamoyl)-2,2-dimethyl-1,3-dioxolan-4-yl)methyl dihydrogen phosphate
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating, [(4R,5R)-5-(hydroxycarbamoyl)-2,2-dimethyl-1,3-dioxolan-4-yl]methyl dihydrogen phosphate
Authors:Leonard, P.G.
Deposit date:2017-02-07
Release date:2018-08-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Functional Genomics Reveals Synthetic Lethality between Phosphogluconate Dehydrogenase and Oxidative Phosphorylation.
Cell Rep, 26, 2019
1SLX
DownloadVisualize
BU of 1slx by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; ZINC-BOUND
Descriptor: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
Authors:Brinen, L.S, Fletterick, R.J.
Deposit date:1996-02-07
Release date:1996-07-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
4NJV
DownloadVisualize
BU of 4njv by Molmil
Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with ritonavir
Descriptor: Protease, RITONAVIR
Authors:Yedidi, R.S, Garimella, H, Chang, S.B, Kaufman, J.D, Das, D, Wingfield, P.T, Mitsuya, H.
Deposit date:2013-11-11
Release date:2014-04-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Conserved Hydrogen-Bonding Network of P2 bis-Tetrahydrofuran-Containing HIV-1 Protease Inhibitors (PIs) with a Protease Active-Site Amino Acid Backbone Aids in Their Activity against PI-Resistant HIV.
Antimicrob.Agents Chemother., 58, 2014
1TCE
DownloadVisualize
BU of 1tce by Molmil
SOLUTION NMR STRUCTURE OF THE SHC SH2 DOMAIN COMPLEXED WITH A TYROSINE-PHOSPHORYLATED PEPTIDE FROM THE T-CELL RECEPTOR, MINIMIZED AVERAGE STRUCTURE
Descriptor: PHOSPHOPEPTIDE OF THE ZETA CHAIN OF T CELL RECEPTOR, SHC
Authors:Zhou, M.-M, Meadows, R.P, Logan, T.M, Yoon, H.S, Wade, W.R, Ravichandran, K.S, Burakoff, S.J, Feisk, S.W.
Deposit date:1996-03-27
Release date:1997-05-15
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of the Shc SH2 domain complexed with a tyrosine-phosphorylated peptide from the T-cell receptor.
Proc.Natl.Acad.Sci.USA, 92, 1995
1SLV
DownloadVisualize
BU of 1slv by Molmil
RAT ANIONIC N143H, E151H TRYPSIN COMPLEXED TO A86H ECOTIN; COPPER-BOUND
Descriptor: ACETATE ION, ANIONIC TRYPSIN, CALCIUM ION, ...
Authors:Brinen, L.S, Fletterick, R.J.
Deposit date:1996-02-07
Release date:1996-07-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray structures of a designed binding site in trypsin show metal-dependent geometry.
Biochemistry, 35, 1996
4TT4
DownloadVisualize
BU of 4tt4 by Molmil
Crystal structure of ATAD2A bromodomain complexed with H3(1-21)K14Ac peptide
Descriptor: ATPase family AAA domain-containing protein 2, CHLORIDE ION, Histone H3(1-21)K4Ac, ...
Authors:Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
Deposit date:2014-06-19
Release date:2014-12-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
4TT2
DownloadVisualize
BU of 4tt2 by Molmil
Crystal structure of ATAD2A bromodomain complexed with H4(1-20)K5Ac peptide
Descriptor: ATPase family AAA domain-containing protein 2, Histone H4K5Ac
Authors:Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
Deposit date:2014-06-19
Release date:2014-12-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
1VKH
DownloadVisualize
BU of 1vkh by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE SERINE HYDROLASE (YDR428C) FROM SACCHAROMYCES CEREVISIAE AT 1.85 A RESOLUTION
Descriptor: CHLORIDE ION, GLYCEROL, putative serine hydrolase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-05-20
Release date:2004-06-08
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of an alpha/beta serine hydrolase (YDR428C) from Saccharomyces cerevisiae at 1.85 A resolution
Proteins, 58, 2005
7UTS
DownloadVisualize
BU of 7uts by Molmil
CPV Total-Fab Polyclonal A Site Fab
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTU
DownloadVisualize
BU of 7utu by Molmil
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
Descriptor: Capsid protein 2, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTR
DownloadVisualize
BU of 7utr by Molmil
CPV Affinity Purified Polyclonal Fab B Site Fab
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTV
DownloadVisualize
BU of 7utv by Molmil
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
7UTP
DownloadVisualize
BU of 7utp by Molmil
CPV Affinity Purified Polyclonal Fab A Site Fab
Descriptor: Capsid protein VP1, Heavy chain antibody fragment, Light chain antibody fragment
Authors:Hartmann, S.R, Hafenstein, S.L, Charnesky, A.J.
Deposit date:2022-04-27
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo EM structures map a post vaccination polyclonal antibody response to canine parvovirus.
Commun Biol, 6, 2023
6ILQ
DownloadVisualize
BU of 6ilq by Molmil
Crystal structure of PPARgamma with compound BR101549
Descriptor: Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma, ethyl [2-butyl-6-oxo-1-{[2'-(5-oxo-4,5-dihydro-1,2,4-oxadiazol-3-yl)[1,1'-biphenyl]-4-yl]methyl}-4-(propan-2-yl)-1,6-dihydropyrimidin-5-yl]acetate
Authors:Hong, E, Jang, T.H, Chin, J, Kim, K.H, Jung, W, Kim, S.H.
Deposit date:2018-10-19
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.408 Å)
Cite:Identification of BR101549 as a lead candidate of non-TZD PPAR gamma agonist for the treatment of type 2 diabetes: Proof-of-concept evaluation and SAR.
Bioorg.Med.Chem.Lett., 29, 2019

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon