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C3HR3_9r_shift4: Extendable repeat protein fiber
Descriptor:	C3HR3_9r_shift4
Authors:	Bethel, N.P, Borst, A.J.
Deposit date:	2023-02-17
Release date:	2023-08-30
Last modified:	2023-12-13
Method:	ELECTRON MICROSCOPY (3.92 Å)
Cite:	Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023

8GA9

C4HR1_4r: Extendable repeat protein tetramer
Descriptor:	C4HR1_4r
Authors:	Bethel, N.P, Borst, A.J.
Deposit date:	2023-02-22
Release date:	2023-08-30
Last modified:	2023-12-20
Method:	ELECTRON MICROSCOPY (3.71 Å)
Cite:	Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023

8GAQ

C5HR2_4r: Extendable repeat protein pentamer
Descriptor:	C5HR2_4r
Authors:	Bethel, N.P, Borst, A.J.
Deposit date:	2023-02-23
Release date:	2023-08-30
Last modified:	2023-12-20
Method:	ELECTRON MICROSCOPY (3.73 Å)
Cite:	Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023

5KUX

Designed influenza hemagglutinin binding protein HSB.2
Descriptor:	Designed influenza inhibitor protein HSB.2
Authors:	Lee, P.S, Bernard, S.M, Wilson, I.A.
Deposit date:	2016-07-13
Release date:	2017-06-14
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site. Nat. Biotechnol., 35, 2017

5KUY

Influenza hemagglutinin H3 A/Hong Kong/1/1968 in complex with designed inhibitor protein HSB.2A
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Designed influenza inhibitor HSB.2A, ...
Authors:	Bernard, S.M, Wilson, I.A.
Deposit date:	2016-07-13
Release date:	2017-06-14
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (2.598 Å)
Cite:	Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site. Nat. Biotechnol., 35, 2017

7UZL

Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching (B-TC conformation)
Descriptor:	Cyclic peptide D9.16 DPR-MAA-ALA-DVA-MLE-LEU-LEU-PRO-DLE
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-05-09
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UBC

Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in d6-DMSO with cis/trans switching
Descriptor:	Cyclic peptide D9.16 DPR-MAA-ALA-DVA-MLE-LEU-LEU-PRO-DLE
Authors:	Ramelot, T.A, Tejero, R, Monteltione, G.T.
Deposit date:	2022-03-14
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UBF

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in 50% d6-DMSO and 50% water with cis/trans switching (CC conformation, 50%)
Descriptor:	Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-03-14
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UBD

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching (A-CC conformation)
Descriptor:	Cyclic peptide D8.31 DAL-DPR-MLU-DVA-DAL-DPR-MLU-DVA
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-03-14
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UBE

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in d6-DMSO with cis/trans switching
Descriptor:	Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-03-14
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UBI

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in CDCl3 with cis/trans switching (TT conformation, 47%)
Descriptor:	Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-03-14
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UBH

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in CDCl3 with cis/trans switching
Descriptor:	Cyclic peptide D8.31 DAL-DPR-MLU-DVA-DAL-DPR-MLU-DVA
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-03-14
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UBG

Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching (A-TT conformation)
Descriptor:	Cyclic peptide D9.16 DPR-MAA-ALA-DVA-MLE-LEU-LEU-PRO-DLE
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-03-14
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

7UDJ

Crystal structure of designed helical repeat protein RPB_PEW3_R4 bound to PAWx4 peptide
Descriptor:	4xPAW peptide, De novo designed helical repeat protein RPB_PEW3_R4
Authors:	Redler, R.L, Chang, Y, Bhabha, G, Ekiert, D.
Deposit date:	2022-03-20
Release date:	2023-03-22
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	De novo design of modular peptide-binding proteins by superhelical matching. Nature, 616, 2023

2A0M

Arginase superfamily protein from Trypanosoma cruzi
Descriptor:	ARGINASE SUPERFAMILY PROTEIN, CHLORIDE ION
Authors:	Arakaki, T.L, Merritt, E.A, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:	2005-06-16
Release date:	2005-07-05
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.603 Å)
Cite:	Structural genomics of pathogenic protozoa: an overview. Methods Mol.Biol., 426, 2008

8CUN

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in 50% d6-DMSO and 50% water with cis/trans switching (CC conformation, 50%)
Descriptor:	Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-05-17
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

8CWA

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in CDCl3 with cis/trans switching (TC conformation, 53%)
Descriptor:	Cyclic peptide D8.21 DVA-MLE-DPR-LEU-DVA-MLE-DPR-LEU
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-05-18
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

8CTO

Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching (B-CT conformation)
Descriptor:	Cyclic peptide D8.31 DAL-DPR-MLU-DVA-DAL-DPR-MLU-DVA
Authors:	Ramelot, T.A, Tejero, R, Montelione, G.T.
Deposit date:	2022-05-16
Release date:	2022-09-14
Last modified:	2022-09-28
Method:	SOLUTION NMR
Cite:	Accurate de novo design of membrane-traversing macrocycles. Cell, 185, 2022

6P6F

BG505 SOSIP-I53-50NP
Descriptor:	I53-50A.1NT1, I53-50B.4PT1
Authors:	Berndsen, Z.T, Ward, A.B.
Deposit date:	2019-06-03
Release date:	2019-06-19
Last modified:	2019-12-18
Method:	ELECTRON MICROSCOPY (4.5 Å)
Cite:	Enhancing and shaping the immunogenicity of native-like HIV-1 envelope trimers with a two-component protein nanoparticle. Nat Commun, 10, 2019

7N1J

Crystal structure of FGFR4 domain 3 in complex with a de novo-designed mini-binder
Descriptor:	Binder, Fibroblast growth factor receptor 4
Authors:	Park, J.S, Lee, S.
Deposit date:	2021-05-27
Release date:	2022-04-06
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.99 Å)
Cite:	Design of protein-binding proteins from the target structure alone. Nature, 605, 2022

7N1K

Crystal structure of a de novo-designed mini-protein targeting FGFR
Descriptor:	Binder
Authors:	Park, J.S, Lee, S.
Deposit date:	2021-05-27
Release date:	2022-04-06
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (3.01 Å)
Cite:	Design of protein-binding proteins from the target structure alone. Nature, 605, 2022

7N3T

TrkA ECD complex with designed miniprotein ligand
Descriptor:	1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Jude, K.M, Cao, L, Garcia, K.C.
Deposit date:	2021-06-01
Release date:	2022-04-20
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.84 Å)
Cite:	Design of protein-binding proteins from the target structure alone. Nature, 605, 2022

5AN7

Structure of the engineered retro-aldolase RA95.5-8F with a bound 1,3-diketone inhibitor
Descriptor:	(2E)-1-(6-methoxynaphthalen-2-yl)but-2-en-1-one, PHOSPHATE ION, RA95.5-8F
Authors:	Obexer, R, Mittl, P.R.E, Hilvert, D.
Deposit date:	2015-09-04
Release date:	2016-08-17
Last modified:	2024-01-10
Method:	X-RAY DIFFRACTION (1.1 Å)
Cite:	Emergence of a catalytic tetrad during evolution of a highly active artificial aldolase. Nat Chem, 9, 2017

7KNA

Localized reconstruction of the H1 A/Michigan/45/2015 ectodomain displayed at the surface of I53_dn5 nanoparticle
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin,I53_dn5
Authors:	Acton, O.J, Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:	2020-11-04
Release date:	2021-03-31
Last modified:	2024-05-01
Method:	ELECTRON MICROSCOPY (3.3 Å)
Cite:	Quadrivalent influenza nanoparticle vaccines induce broad protection. Nature, 592, 2021

3B5L

Crystal Structure of a Novel Engineered Retroaldolase: RA-61
Descriptor:	AMMONIUM ION, Endoxylanase, SULFATE ION
Authors:	Stoddard, B.L, Doyle, L.A.
Deposit date:	2007-10-26
Release date:	2008-01-22
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	De novo computational design of retro-aldol enzymes. Science, 319, 2008

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Displayed results:	25
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