Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1SZC
DownloadVisualize
BU of 1szc by Molmil
Structural basis for nicotinamide cleavage and ADP-ribose transfer by NAD+-dependent Sir2 histone/protein deacetylases
Descriptor: CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, CHLORIDE ION, GLYCEROL, ...
Authors:Zhao, K, Harshaw, R, Chai, X, Marmorstein, R.
Deposit date:2004-04-05
Release date:2004-06-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for nicotinamide cleavage and ADP-ribose transfer by NAD(+)-dependent Sir2 histone/protein deacetylases.
Proc.Natl.Acad.Sci.Usa, 101, 2004
4U9V
DownloadVisualize
BU of 4u9v by Molmil
Crystal structure of NatD (Naa40p) bound to acetyl CoA
Descriptor: ACETYL COENZYME *A, N-alpha-acetyltransferase 40
Authors:Magin, R.S, Liszczak, G.P, Marmorstein, R.
Deposit date:2014-08-06
Release date:2015-01-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The Molecular Basis for Histone H4- and H2A-Specific Amino-Terminal Acetylation by NatD.
Structure, 23, 2015
4UA3
DownloadVisualize
BU of 4ua3 by Molmil
Crystal structure of selenomethionine labeled SpNatD
Descriptor: CHLORIDE ION, COENZYME A, Uncharacterized N-acetyltransferase C825.04c
Authors:Magin, R.S, Liszczak, G.P, Marmorstein, R.
Deposit date:2014-08-07
Release date:2015-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Molecular Basis for Histone H4- and H2A-Specific Amino-Terminal Acetylation by NatD.
Structure, 23, 2015
4U9W
DownloadVisualize
BU of 4u9w by Molmil
Crystal Structure of NatD bound to H4/H2A peptide and CoA
Descriptor: COENZYME A, GLYCEROL, Histone H4/H2A N-terminus, ...
Authors:Magin, R.S, Liszczak, G.P, Marmorstein, R.
Deposit date:2014-08-06
Release date:2015-01-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The Molecular Basis for Histone H4- and H2A-Specific Amino-Terminal Acetylation by NatD.
Structure, 23, 2015
6POE
DownloadVisualize
BU of 6poe by Molmil
Structure of ACLY in complex with CoA
Descriptor: ATP-citrate synthase, COENZYME A
Authors:Wei, X, Marmorstein, R.
Deposit date:2019-07-03
Release date:2019-12-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
4GS4
DownloadVisualize
BU of 4gs4 by Molmil
Structure of the alpha-tubulin acetyltransferase, alpha-TAT1
Descriptor: ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase
Authors:Friedmann, D.R, Fan, J, Marmorstein, R.
Deposit date:2012-08-27
Release date:2012-10-17
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:Structure of the alpha-tubulin acetyltransferase, alpha TAT1, and implications for tubulin-specific acetylation.
Proc.Natl.Acad.Sci.USA, 109, 2012
7LJ9
DownloadVisualize
BU of 7lj9 by Molmil
Structure of human ATP citrate lyase in complex with acetyl-CoA and oxaloacetate
Descriptor: ACETYL COENZYME *A, ATP-citrate synthase, OXALOACETATE ION
Authors:Wei, X, Marmorstein, R.
Deposit date:2021-01-28
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Reply to: Acetyl-CoA is produced by the citrate synthase homology module of ATP-citrate lyase.
Nat.Struct.Mol.Biol., 28, 2021
1QP9
DownloadVisualize
BU of 1qp9 by Molmil
STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7
Descriptor: CYP1(HAP1-PC7) ACTIVATORY PROTEIN, DNA (5'-D(*AP*CP*GP*CP*TP*AP*TP*TP*AP*TP*CP*GP*CP*TP*AP*TP*TP*AP*GP*T)-3'), DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*CP*GP*AP*TP*AP*AP*TP*AP*GP*CP*GP*T)-3'), ...
Authors:Lukens, A, King, D, Marmorstein, R.
Deposit date:1999-06-01
Release date:2000-10-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of HAP1-PC7 bound to DNA: implications for DNA recognition and allosteric effects of DNA-binding on transcriptional activation.
Nucleic Acids Res., 28, 2000
2QIY
DownloadVisualize
BU of 2qiy by Molmil
yeast Deubiquitinase Ubp3 and Bre5 cofactor complex
Descriptor: UBP3-associated protein BRE5, Ubiquitin carboxyl-terminal hydrolase 3
Authors:Li, K, Liu, X, Marmorstein, R.
Deposit date:2007-07-05
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Molecular basis for bre5 cofactor recognition by the ubp3 deubiquitylating enzyme.
J.Mol.Biol., 372, 2007
2YAK
DownloadVisualize
BU of 2yak by Molmil
Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine ligand (OSV)
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, RUTHENIUM OCTASPORINE 4
Authors:Feng, L, Geisselbrecht, Y, Blanck, S, Wilbuer, A, Atilla-Gokcumen, G.E, Filippakopoulos, P, Kraeling, K, Celik, M.A, Harms, K, Maksimoska, J, Marmorstein, R, Frenking, G, Knapp, S, Essen, L.-O, Meggers, E.
Deposit date:2011-02-23
Release date:2011-04-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structurally Sophisticated Octahedral Metal Complexes as Highly Selective Protein Kinase Inhibitors.
J.Am.Chem.Soc., 133, 2011
5JT2
DownloadVisualize
BU of 5jt2 by Molmil
BRAFV600E Kinase Domain In Complex with Chemically Linked Vemurafenib Inhibitor VEM-BISAMIDE
Descriptor: 2,2'-oxybis(N-{[4-(3-{2,6-difluoro-3-[(propane-1-sulfonyl)amino]benzoyl}-1H-pyrrolo[2,3-b]pyridin-5-yl)phenyl]methyl}acetamide), BENZAMIDINE, Serine/threonine-protein kinase B-raf
Authors:Grasso, M.J, Marmorstein, R.
Deposit date:2016-05-09
Release date:2016-09-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Chemically Linked Vemurafenib Inhibitors Promote an Inactive BRAF(V600E) Conformation.
Acs Chem.Biol., 11, 2016
5DFP
DownloadVisualize
BU of 5dfp by Molmil
Crystal structure of PAK1 in complex with an inhibitor compound FRAX1036
Descriptor: 6-[2-chloro-4-(6-methylpyrazin-2-yl)phenyl]-8-ethyl-2-{[2-(1-methylpiperidin-4-yl)ethyl]amino}pyrido[2,3-d]pyrimidin-7(8H)-one, DIMETHYL SULFOXIDE, Serine/threonine-protein kinase PAK 1
Authors:Maksimoska, J, Marmorstein, R, Wang, W.
Deposit date:2015-08-27
Release date:2016-01-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design of Selective PAK1 Inhibitor G-5555: Improving Properties by Employing an Unorthodox Low-pK a Polar Moiety.
Acs Med.Chem.Lett., 6, 2015
6UIA
DownloadVisualize
BU of 6uia by Molmil
Structure of ATP citrate lyase with CoA in a partially open conformation
Descriptor: ATP-citrate synthase, COENZYME A
Authors:Wei, X, Marmorstein, R.
Deposit date:2019-09-30
Release date:2019-12-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
1TRO
DownloadVisualize
BU of 1tro by Molmil
CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
Descriptor: DNA (5'-D(*TP*GP*TP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*TP*AP*GP*T P*AP*C)-3'), PROTEIN (TRP REPRESSOR), TRYPTOPHAN
Authors:Otwinowski, Z, Schevitz, R.W, Zhang, R.-G, Lawson, C.L, Joachimiak, A, Marmorstein, R, Luisi, B.F, Sigler, P.B.
Deposit date:1992-08-30
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of trp repressor/operator complex at atomic resolution.
Nature, 335, 1988
5WJD
DownloadVisualize
BU of 5wjd by Molmil
Crystal structure of Naa80 bound to acetyl-CoA
Descriptor: ACETYL COENZYME *A, CG8481, isoform B, ...
Authors:Goris, M, Magin, R.S, Marmorstein, R, Arnesen, T.
Deposit date:2017-07-21
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural determinants and cellular environment define processed actin as the sole substrate of the N-terminal acetyltransferase NAA80.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1YGH
DownloadVisualize
BU of 1ygh by Molmil
HAT DOMAIN OF GCN5 FROM SACCHAROMYCES CEREVISIAE
Descriptor: GLYCEROL, PROTEIN (TRANSCRIPTIONAL ACTIVATOR GCN5)
Authors:Trievel, R.C, Rojas, J.R, Sterner, D.E, Venkataramani, R, Wang, L, Zhou, J, Allis, C.D, Berger, S.L, Marmorstein, R.
Deposit date:1999-05-27
Release date:1999-08-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and mechanism of histone acetylation of the yeast GCN5 transcriptional coactivator.
Proc.Natl.Acad.Sci.USA, 96, 1999
5WJE
DownloadVisualize
BU of 5wje by Molmil
Crystal structure of Naa80 bound to a bisubstrate analogue
Descriptor: Actin N-terminus peptide, CARBOXYMETHYL COENZYME *A, CG8481, ...
Authors:Goris, M, Magin, R.S, Marmorstein, R, Arnesen, T.
Deposit date:2017-07-21
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:Structural determinants and cellular environment define processed actin as the sole substrate of the N-terminal acetyltransferase NAA80.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1ZX2
DownloadVisualize
BU of 1zx2 by Molmil
Crystal Structure of Yeast UBP3-associated Protein BRE5
Descriptor: UBP3-associated protein BRE5
Authors:Li, K, Zhao, K, Ossareh-Nazari, B, Da, G, Dargemont, C, Marmorstein, R.
Deposit date:2005-06-06
Release date:2005-06-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for interaction between the Ubp3 deubiquitinating enzyme and its Bre5 cofactor
J.Biol.Chem., 280, 2005
3LBX
DownloadVisualize
BU of 3lbx by Molmil
Crystal Structure of the Erythrocyte Spectrin Tetramerization Domain Complex
Descriptor: Spectrin alpha chain, erythrocyte, Spectrin beta chain
Authors:Ipsaro, J.J, Harper, S.L, Messick, T.E, Marmorstein, R, Mondragon, A, Speicher, D.W.
Deposit date:2010-01-08
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure and functional interpretation of the erythrocyte spectrin tetramerization domain complex.
Blood, 115, 2010
1BC7
DownloadVisualize
BU of 1bc7 by Molmil
SERUM RESPONSE FACTOR ACCESSORY PROTEIN 1A (SAP-1)/DNA COMPLEX
Descriptor: DNA (5'-D(*CP*AP*CP*AP*TP*CP*CP*TP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*AP*GP*GP*AP*TP*GP*TP*G)-3'), PROTEIN (ETS-DOMAIN PROTEIN)
Authors:Mo, Y, Vaessen, B, Johnston, K, Marmorstein, R.
Deposit date:1998-05-05
Release date:1999-01-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structures of SAP-1 bound to DNA targets from the E74 and c-fos promoters: insights into DNA sequence discrimination by Ets proteins.
Mol.Cell, 2, 1998
1BC8
DownloadVisualize
BU of 1bc8 by Molmil
STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETS
Descriptor: DNA (5'-D(*AP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*CP*GP*GP*AP*AP*GP*T)-3'), PROTEIN (SAP-1 ETS DOMAIN), ...
Authors:Mo, Y, Vaessen, B, Johnston, K, Marmorstein, R.
Deposit date:1998-05-05
Release date:1998-12-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structures of SAP-1 bound to DNA targets from the E74 and c-fos promoters: insights into DNA sequence discrimination by Ets proteins.
Mol.Cell, 2, 1998
7LIW
DownloadVisualize
BU of 7liw by Molmil
Local refinement of human ATP citrate lyase E599Q mutant ASH domain
Descriptor: (2S)-2-hydroxy-2-[2-oxo-2-(phosphonooxy)ethyl]butanedioic acid, ADENOSINE-5'-DIPHOSPHATE, ATP-citrate synthase, ...
Authors:Wei, X, Marmorstein, R.
Deposit date:2021-01-28
Release date:2021-05-19
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Reply to: Acetyl-CoA is produced by the citrate synthase homology module of ATP-citrate lyase.
Nat.Struct.Mol.Biol., 28, 2021
7LLA
DownloadVisualize
BU of 7lla by Molmil
Structure of human ATP citrate lyase in complex with acetyl-CoA and oxaloacetate (EM map was generated in Cryosparc with non-uniform refinement)
Descriptor: ACETYL COENZYME *A, ATP-citrate synthase, OXALOACETATE ION
Authors:Wei, X, Marmorstein, R.
Deposit date:2021-02-03
Release date:2021-03-03
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Reply to: Acetyl-CoA is produced by the citrate synthase homology module of ATP-citrate lyase.
Nat.Struct.Mol.Biol., 28, 2021
6C95
DownloadVisualize
BU of 6c95 by Molmil
The Human NatA (Naa10/Naa15) amino-terminal acetyltransferase complex bound to HYPK
Descriptor: Huntingtin-interacting protein K, INOSITOL HEXAKISPHOSPHATE, N-alpha-acetyltransferase 10, ...
Authors:Gottlieb, L, Marmorstein, R.
Deposit date:2018-01-25
Release date:2018-06-06
Last modified:2021-07-21
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structure of Human NatA and Its Regulation by the Huntingtin Interacting Protein HYPK.
Structure, 26, 2018
6C9M
DownloadVisualize
BU of 6c9m by Molmil
The Human NatA (Naa10/Naa15) amino-terminal acetyltransferase complex
Descriptor: INOSITOL HEXAKISPHOSPHATE, N-alpha-acetyltransferase 10, N-alpha-acetyltransferase 15, ...
Authors:Gottlieb, L, Marmorstein, R.
Deposit date:2018-01-26
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Human NatA and Its Regulation by the Huntingtin Interacting Protein HYPK.
Structure, 26, 2018

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon