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2O52
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BU of 2o52 by Molmil
Crystal structure of human RAB4B in complex with GDP
Descriptor: BETA-MERCAPTOETHANOL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zhu, H, Tempel, W, Wang, J, Shen, Y, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-12-05
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human RAB4B in complex with GDP
To be Published
2PMY
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BU of 2pmy by Molmil
EF-hand domain of human RASEF
Descriptor: CALCIUM ION, RAS and EF-hand domain-containing protein, SULFATE ION, ...
Authors:Zhu, H, Shen, Y, Wang, J, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-04-23
Release date:2007-05-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:EF-hand domain of human RASEF
To be Published
2P5S
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BU of 2p5s by Molmil
RAB domain of human RASEF in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, RAS and EF-hand domain containing, UNKNOWN ATOM OR ION
Authors:Zhu, H, Wang, J, Shen, Y, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-03-16
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:RAB domain of human RASEF in complex with GDP
To be Published
2IA5
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BU of 2ia5 by Molmil
T4 polynucleotide kinase/phosphatase with bound sulfate and magnesium.
Descriptor: ARSENIC, MAGNESIUM ION, Polynucleotide kinase, ...
Authors:Zhu, H, Smith, P.C, Wang, L.K, Lima, C.D, Shuman, S.
Deposit date:2006-09-07
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-function analysis of the 3' phosphatase component of T4 polynucleotide kinase/phosphatase.
Virology, 366, 2007
5FZQ
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BU of 5fzq by Molmil
Designed TPR Protein M4N
Descriptor: DESIGNED TPR PROTEIN, SULFATE ION
Authors:Albrecht, R, Zhu, H, Hartmann, M.D.
Deposit date:2016-03-15
Release date:2016-10-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Origin of a folded repeat protein from an intrinsically disordered ancestor.
Elife, 5, 2016
4XH7
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BU of 4xh7 by Molmil
Crystal structure of MUPP1 PDZ4
Descriptor: IMIDAZOLE, Multiple PDZ domain protein
Authors:Liu, Z, Zhu, H, Liu, W.
Deposit date:2015-01-05
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Biochemical and structural characterization of MUPP1-PDZ4 domain from Mus musculus.
Acta Biochim.Biophys.Sin., 47, 2015
8SMC
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BU of 8smc by Molmil
Cryo-EM structure of LRRK2 bound with type-I inhibitor DNL201
Descriptor: 2-methyl-2-(3-methyl-4-{[4-(methylamino)-5-(trifluoromethyl)pyrimidin-2-yl]amino}-1H-pyrazol-1-yl)propanenitrile, GUANOSINE-5'-DIPHOSPHATE, non-specific serine/threonine protein kinase
Authors:Sun, J, Zhu, H.
Deposit date:2023-04-26
Release date:2024-01-03
Method:ELECTRON MICROSCOPY (4.02 Å)
Cite:Rab29-dependent asymmetrical activation of leucine-rich repeat kinase 2.
Science, 382, 2023
5WDH
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BU of 5wdh by Molmil
Motor domain of human kinesin family member C1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIFC1, MAGNESIUM ION, ...
Authors:Zhu, H, Tempel, W, He, H, Shen, Y, Wang, J, Brothers, G, Landry, R, Arrowsmith, C.H, Edwards, A.M, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2017-07-05
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Structural basis of small molecule ATPase inhibition of a human mitotic kinesin motor protein.
Sci Rep, 7, 2017
5FZS
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BU of 5fzs by Molmil
Designed TPR Protein M4N delta C (CF II)
Descriptor: DESIGNED TPR PROTEIN
Authors:Albrecht, R, Zhu, H, Hartmann, M.D.
Deposit date:2016-03-15
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Origin of a folded repeat protein from an intrinsically disordered ancestor.
Elife, 5, 2016
5FZR
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BU of 5fzr by Molmil
Designed TPR Protein M4N delta C (CF I)
Descriptor: DESIGNED TPR PROTEIN
Authors:Albrecht, R, Zhu, H, Hartmann, M.D.
Deposit date:2016-03-15
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.045 Å)
Cite:Origin of a folded repeat protein from an intrinsically disordered ancestor.
Elife, 5, 2016
5HSI
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BU of 5hsi by Molmil
Crystal structure of tyrosine decarboxylase at 1.73 Angstroms resolution
Descriptor: MAGNESIUM ION, Putative decarboxylase
Authors:Ni, Y, Zhou, J, Zhu, H, Zhang, K.
Deposit date:2016-01-25
Release date:2016-09-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.732 Å)
Cite:Crystal structure of tyrosine decarboxylase and identification of key residues involved in conformational swing and substrate binding
Sci Rep, 6, 2016
2R13
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BU of 2r13 by Molmil
Crystal structure of human mitoNEET reveals a novel [2Fe-2S] cluster coordination
Descriptor: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, Zinc finger CDGSH domain-containing protein 1
Authors:Hou, X, Liu, R, Ross, S, Smart, E.J, Zhu, H, Gong, W.
Deposit date:2007-08-22
Release date:2007-09-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic studies of human MitoNEET
J.Biol.Chem., 282, 2007
6DW0
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BU of 6dw0 by Molmil
Cryo-EM structure of the benzodiazepine-sensitive alpha1beta1gamma2S tri-heteromeric GABAA receptor in complex with GABA (Whole map)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1, ...
Authors:Phulera, S, Zhu, H, Yu, J, Yoshioka, C, Gouaux, E.
Deposit date:2018-06-26
Release date:2018-08-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of the benzodiazepine-sensitive alpha 1 beta 1 gamma 2S tri-heteromeric GABAAreceptor in complex with GABA.
Elife, 7, 2018
6DW1
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BU of 6dw1 by Molmil
Cryo-EM structure of the benzodiazepine-sensitive alpha1beta1gamma2S tri-heteromeric GABAA receptor in complex with GABA (ECD map)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1, ...
Authors:Phulera, S, Zhu, H, Yu, J, Yoshioka, C, Gouaux, E.
Deposit date:2018-06-26
Release date:2018-08-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of the benzodiazepine-sensitive alpha 1 beta 1 gamma 2S tri-heteromeric GABAAreceptor in complex with GABA.
Elife, 7, 2018
8YKW
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BU of 8ykw by Molmil
Cryo-EM structure of succinate receptor SUCR1 bound to succinic acid
Descriptor: Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, C, Liu, H, Li, J, Zhu, H, Fu, W, Xu, H.E.
Deposit date:2024-03-05
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Cryo-EM structure of succinate receptor SUCR1 bound to succinic acid
To Be Published
8YKV
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BU of 8ykv by Molmil
Cryo-EM structure of succinate receptor SUCR1 bound to compound 31
Descriptor: (2~{S})-2-[[6-[4-(trifluoromethyloxy)phenyl]pyridin-2-yl]carbonylamino]butanedioic acid, Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Li, C, Liu, H, Li, J, Zhu, H, Fu, W, Xu, H.E.
Deposit date:2024-03-05
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Cryo-EM structure of succinate receptor SUCR1 bound to compound 31
To Be Published
8YKX
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BU of 8ykx by Molmil
Cryo-EM structure of succinate receptor SUCR1 bound to maleic acid
Descriptor: Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, C, Liu, H, Li, J, Zhu, H, Fu, W, Xu, H.E.
Deposit date:2024-03-05
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Cryo-EM structure of succinate receptor SUCR1 bound to maleic acid
To Be Published
6L62
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BU of 6l62 by Molmil
Neutralization mechanism of a monoclonal antibody targeting a porcine circovirus type 2 Cap protein conformational epitope
Descriptor: Capsid protein, Heavy chain of Fab fragment, Light chain of Fab fragment
Authors:Sun, Z, Huang, L, Xia, D, Wei, Y, Sun, E, Zhu, H, Bian, H, Wu, H, Feng, L, Wang, J, Liu, C.
Deposit date:2019-10-25
Release date:2020-02-12
Last modified:2020-04-29
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Neutralization Mechanism of a Monoclonal Antibody Targeting a Porcine Circovirus Type 2 Cap Protein Conformational Epitope.
J.Virol., 94, 2020
6DCG
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BU of 6dcg by Molmil
Discovery of MK-8353: An Orally Bioavailable Dual Mechanism ERK Inhibitor for Oncology
Descriptor: (3S)-3-(methylsulfanyl)-1-(2-{4-[4-(1-methyl-1H-1,2,4-triazol-3-yl)phenyl]-3,6-dihydropyridin-1(2H)-yl}-2-oxoethyl)-N-(3-{6-[(propan-2-yl)oxy]pyridin-3-yl}-1H-indazol-5-yl)pyrrolidine-3-carboxamide, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Boga, S.B, Deng, Y, Zhu, L, Nan, Y, Cooper, A, Shipps Jr, G.W, Doll, R, Shih, N, Zhu, H, Sun, R, Wang, T, Paliwal, S, Tsui, H, Gao, X, Yao, X, Desai, J, Wang, J, Alhassan, A.B, Kelly, J, Patel, M, Muppalla, K, Gudipati, S, Zhang, L, Buevich, A, Hesk, D, Carr, D, Dayananth, P, Mei, H, Cox, K, Sherborne, B, Hruza, A.W, Xiao, L, Jin, W, Long, B, Liu, G, Taylor, S.A, Kirschmeier, P, Windsor, W.T, Bishop, R, Samatar, A.A.
Deposit date:2018-05-06
Release date:2018-08-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:MK-8353: Discovery of an Orally Bioavailable Dual Mechanism ERK Inhibitor for Oncology.
ACS Med Chem Lett, 9, 2018
1XC1
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BU of 1xc1 by Molmil
Oxo Zirconium(IV) Cluster in the Ferric Binding Protein (FBP)
Descriptor: OXO ZIRCONIUM(IV) CLUSTER, periplasmic iron-binding protein
Authors:Zhong, W, Alexeev, D, Harvey, I, Guo, M, Hunter, D.J.B, Zhu, H, Campopiano, D.J, Sadler, P.J.
Deposit date:2004-08-31
Release date:2004-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Assembly of an Oxo-Zirconium(IV) Cluster in a Protein Cleft
Angew.Chem.Int.Ed.Engl., 43, 2004
6LPX
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BU of 6lpx by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with 2-oxoglutarate (2-OG)
Descriptor: 2-OXOGLUTARIC ACID, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6LPP
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BU of 6lpp by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with D-2-hydroxyglutarate (D-2-HG)
Descriptor: (2R)-2-hydroxypentanedioic acid, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
3CEY
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BU of 3cey by Molmil
Crystal structure of L3MBTL2
Descriptor: Lethal(3)malignant brain tumor-like 2 protein
Authors:Nady, N, Guo, Y, Pan, P, Allali-Hassani, A, Qi, C, Zhu, H, Dong, A, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Edwards, A.M, Weigelt, J, Bountra, C, Arrowsmith, C.H, Bochkarev, A, Read, R, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2008-02-29
Release date:2008-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Methylation-state-specific recognition of histones by the MBT repeat protein L3MBTL2.
Nucleic Acids Res., 37, 2009
3F70
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BU of 3f70 by Molmil
Crystal structure of L3MBTL2-H4K20me1 complex
Descriptor: Lethal(3)malignant brain tumor-like 2 protein, N-METHYL-LYSINE
Authors:Guo, Y, Qi, C, Allali-Hassani, A, Pan, P, Zhu, H, Dong, A, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Edwards, A.M, Weigelt, J, Bountra, C, Arrowsmith, C.H, Botchkarev, A, Read, R, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2008-11-07
Release date:2009-01-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Methylation-state-specific recognition of histones by the MBT repeat protein L3MBTL2.
Nucleic Acids Res., 37, 2009
3ECQ
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BU of 3ecq by Molmil
Endo-alpha-N-acetylgalactosaminidase from Streptococcus pneumoniae: SeMet structure
Descriptor: CALCIUM ION, Endo-alpha-N-acetylgalactosaminidase, GLYCEROL, ...
Authors:Caines, M.E.C, Zhu, H, Vuckovic, M, Strynadka, N.C.J.
Deposit date:2008-09-01
Release date:2008-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structural basis for T-antigen hydrolysis by Streptococcus pneumoniae: a target for structure-based vaccine design.
J.Biol.Chem., 283, 2008

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