Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3BR8
DownloadVisualize
BU of 3br8 by Molmil
Crystal structure of acylphosphatase from Bacillus subtilis
Descriptor: GLYCEROL, PHOSPHATE ION, Probable acylphosphatase
Authors:Li, D, Hu, J.C, Xia, B, Su, X.D.
Deposit date:2007-12-21
Release date:2008-06-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Conformational Transitions Revealed by Structures of Acylphosphatase from Bacillus subtilis in Different States
to be published
2AYD
DownloadVisualize
BU of 2ayd by Molmil
Crystal Structure of the C-terminal WRKY domainof AtWRKY1, an SA-induced and partially NPR1-dependent transcription factor
Descriptor: SUCCINIC ACID, WRKY transcription factor 1, ZINC ION
Authors:Duan, M.R, Nan, J, Li, Y, Su, X.D.
Deposit date:2005-09-07
Release date:2006-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA binding mechanism revealed by high resolution crystal structure of Arabidopsis thaliana WRKY1 protein.
Nucleic Acids Res., 35, 2007
2BB0
DownloadVisualize
BU of 2bb0 by Molmil
Structure of Imidazolonepropionase from Bacillus subtilis
Descriptor: ACETATE ION, Imidazolonepropionase, ZINC ION
Authors:Liang, Y.H, Yu, Y, Su, X.D.
Deposit date:2005-10-16
Release date:2006-09-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A catalytic mechanism revealed by the crystal structures of the imidazolonepropionase from Bacillus subtilis
J.Biol.Chem., 281, 2006
2B78
DownloadVisualize
BU of 2b78 by Molmil
A putative sam-dependent methyltransferase from Streptococcus mutans
Descriptor: hypothetical protein SMU.776
Authors:Nan, J, Wang, K.T, Su, X.D.
Deposit date:2005-10-03
Release date:2006-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A putative sam-dependent methyltransferase from Streptococcus mutans
To be Published
3T0C
DownloadVisualize
BU of 3t0c by Molmil
Crystal structure of Streptococcus mutans MetE complexed with Zinc
Descriptor: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, SULFATE ION, ZINC ION
Authors:Fu, T.M, Liang, Y.H, Su, X.D.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:Crystal Structures of Cobalamin-Independent Methionine Synthase (MetE) from Streptococcus mutans: A Dynamic Zinc-Inversion Model
J.Mol.Biol., 412, 2011
4ETM
DownloadVisualize
BU of 4etm by Molmil
Crystal structure of YfkJ from Bacillus subtilis
Descriptor: Low molecular weight protein-tyrosine-phosphatase yfkJ, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Cao, X.F, Su, X.D.
Deposit date:2012-04-24
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of YfkJ from Bacillus subtilis
To be published
3SQZ
DownloadVisualize
BU of 3sqz by Molmil
Crystal structure of HMG_CoA synthase complexed with CoA
Descriptor: COENZYME A, GLYCEROL, Putative hydroxymethylglutaryl-CoA synthase
Authors:Liu, Y.H, Fu, T.M, Liu, X, Su, X.D.
Deposit date:2011-07-06
Release date:2012-07-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of HMG-CoA synthase from Streptococcus mutans
To be Published
3SR7
DownloadVisualize
BU of 3sr7 by Molmil
Crystal structure of S. mutans isopentenyl pyrophosphate isomerase
Descriptor: Isopentenyl-diphosphate delta-isomerase, PHOSPHATE ION
Authors:Liu, Y.H, Fu, T.M, Liu, X, Su, X.D.
Deposit date:2011-07-07
Release date:2012-07-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.036 Å)
Cite:Crystal structure of S. mutans isopentenyl pyrophosphate isomerase
To be Published
3URG
DownloadVisualize
BU of 3urg by Molmil
The crystal structure of Anabaena CcbP
Descriptor: 5-MERCAPTO-2-NITRO-BENZOIC ACID, Alr1010 protein, SODIUM ION
Authors:Fan, X.X, Liu, X, Su, X.D.
Deposit date:2011-11-22
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Ellman's reagent in promoting crystallization and structure determination of Anabaena CcbP.
Acta Crystallogr.,Sect.F, 68, 2012
4EGS
DownloadVisualize
BU of 4egs by Molmil
Crystal Structure Analysis of Low Molecular Weight Protein Tyrosine Phosphatase from T. tengcongensis
Descriptor: BICARBONATE ION, Ribose 5-phosphate isomerase RpiB, SODIUM ION
Authors:Cao, X.F, Liu, X.Y, Li, L.F, Su, X.D.
Deposit date:2012-04-01
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure Analysis of Low Molecular Weight Protein Tyrosine Phosphatase from T. tengcongensis
To be Published
4ETN
DownloadVisualize
BU of 4etn by Molmil
Crystal structure of YwlE mutant from Bacillus subtilis
Descriptor: Low molecular weight protein-tyrosine-phosphatase ywlE, PHOSPHATE ION
Authors:Cao, X.F, Su, X.D.
Deposit date:2012-04-24
Release date:2012-06-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of YwlE mutant from Bacillus subtilis
To be published
3V6M
DownloadVisualize
BU of 3v6m by Molmil
Inhibition of caspase-6 activity by single mutation outside the active site
Descriptor: Caspase-6
Authors:Cao, Q, Wang, X.J, Liu, D.F, Li, L.F, Su, X.D.
Deposit date:2011-12-20
Release date:2012-03-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.692 Å)
Cite:Inhibitory mechanism of caspase-6 phosphorylation revealed by crystal structures, molecular dynamics simulations, and biochemical assays
J.Biol.Chem., 287, 2012
4F5D
DownloadVisualize
BU of 4f5d by Molmil
ERIS/STING in complex with ligand
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, Transmembrane protein 173
Authors:Huang, Y.H, Liu, X.Y, Su, X.D.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structural basis for the sensing and binding of cyclic di-GMP by STING
Nat.Struct.Mol.Biol., 19, 2012
4F5E
DownloadVisualize
BU of 4f5e by Molmil
Crystal structure of ERIS/STING
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Transmembrane protein 173
Authors:Huang, Y.H, Liu, X.Y, Su, X.D.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:The structural basis for the sensing and binding of cyclic di-GMP by STING
Nat.Struct.Mol.Biol., 19, 2012
3V6L
DownloadVisualize
BU of 3v6l by Molmil
Crystal Structure of caspase-6 inactivation mutation
Descriptor: Caspase-6
Authors:Cao, Q, Wang, X.J, Liu, D.F, Li, L.F, Su, X.D.
Deposit date:2011-12-20
Release date:2012-03-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Inhibitory mechanism of caspase-6 phosphorylation revealed by crystal structures, molecular dynamics simulations, and biochemical assays
J.Biol.Chem., 287, 2012
3E4O
DownloadVisualize
BU of 3e4o by Molmil
Crystal structure of succinate bound state DctB
Descriptor: C4-dicarboxylate transport sensor protein dctB, MAGNESIUM ION, SUCCINIC ACID
Authors:Zhou, Y.F, Nan, J, Nan, B.Y, Liang, Y.H, Panjikar, S, Su, X.D.
Deposit date:2008-08-12
Release date:2008-10-21
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:C4-dicarboxylates sensing mechanism revealed by the crystal structures of DctB sensor domain.
J.Mol.Biol., 383, 2008
3EXR
DownloadVisualize
BU of 3exr by Molmil
Crystal structure of KGPDC from Streptococcus mutans
Descriptor: RmpD (Hexulose-6-phosphate synthase)
Authors:Li, G.L, Liu, X, Li, L.F, Su, X.D.
Deposit date:2008-10-16
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009
3EXS
DownloadVisualize
BU of 3exs by Molmil
Crystal structure of KGPDC from Streptococcus mutans in complex with D-R5P
Descriptor: RIBULOSE-5-PHOSPHATE, RmpD (Hexulose-6-phosphate synthase)
Authors:Li, G.L, Liu, X, Wang, K.T, Li, L.F, Su, X.D.
Deposit date:2008-10-17
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009
3E4P
DownloadVisualize
BU of 3e4p by Molmil
Crystal structure of malonate occupied DctB
Descriptor: C4-dicarboxylate transport sensor protein dctB, MALONIC ACID, STRONTIUM ION
Authors:Zhou, Y.F, Nan, J, Nan, B.Y, Liang, Y.H, Panjikar, S, Su, X.D.
Deposit date:2008-08-12
Release date:2008-10-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:C4-dicarboxylates sensing mechanism revealed by the crystal structures of DctB sensor domain.
J.Mol.Biol., 383, 2008
3H6X
DownloadVisualize
BU of 3h6x by Molmil
Crystal structure of dUTPase from Streptococcus mutans
Descriptor: dUTPase
Authors:Li, G.L, Wang, K.T, Liu, X, Li, L.F, Su, X.D.
Deposit date:2009-04-24
Release date:2010-05-05
Last modified:2018-05-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and activity analysis of dUTP nucleotidohydrolase from Streptococcus mutans
To be Published
3EXT
DownloadVisualize
BU of 3ext by Molmil
Crystal structure of KGPDC from Streptococcus mutans
Descriptor: MAGNESIUM ION, RmpD (Hexulose-6-phosphate synthase)
Authors:Liu, X, Li, G.L, Li, L.F, Su, X.D.
Deposit date:2008-10-17
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009
3E4Q
DownloadVisualize
BU of 3e4q by Molmil
Crystal structure of apo DctB
Descriptor: C4-dicarboxylate transport sensor protein dctB, CALCIUM ION
Authors:Zhou, Y.F, Nan, J, Nan, B.Y, Liang, Y.H, Panjikar, S, Su, X.D.
Deposit date:2008-08-12
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:C4-dicarboxylates sensing mechanism revealed by the crystal structures of DctB sensor domain.
J.Mol.Biol., 383, 2008
6J4F
DownloadVisualize
BU of 6j4f by Molmil
Crystal structure of the AtWRKY2 domain
Descriptor: DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3'), Probable WRKY transcription factor 2, ...
Authors:Xu, Y.P, Xu, H, Wang, B, Su, X.D.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the AtWRKY2 domain
To Be Published
6J4G
DownloadVisualize
BU of 6j4g by Molmil
Crystal structure of the AtWRKY33 domain
Descriptor: DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3'), Probable WRKY transcription factor 33, ...
Authors:Xu, Y.P, Xu, H, Wang, B, Su, X.D.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the N-terminal DNA binding domain of AtWRKY33
To Be Published
6J4E
DownloadVisualize
BU of 6j4e by Molmil
Crystal structure of the AtWRKY1 domain
Descriptor: DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3'), WRKY transcription factor 1, ...
Authors:Xu, Y.P, Xu, H, Wang, B, Su, X.D.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.126 Å)
Cite:Crystal structure of the AtWRKY1 domain
To Be Published

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon