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3T0C

Crystal structure of Streptococcus mutans MetE complexed with Zinc

Replaces:  3L7S
Summary for 3T0C
Entry DOI10.2210/pdb3t0c/pdb
Related2NQ5 3L7R
Descriptor5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, SULFATE ION, ZINC ION, ... (4 entities in total)
Functional Keywordsmete, barrel, methyltransferase, transferase
Biological sourceStreptococcus mutans
Total number of polymer chains1
Total formula weight88153.42
Authors
Fu, T.M.,Liang, Y.H.,Su, X.D. (deposition date: 2011-07-19, release date: 2011-08-03, Last modification date: 2023-11-01)
Primary citationFu, T.M.,Almqvist, J.,Liang, Y.H.,Li, L.,Huang, Y.,Su, X.D.
Crystal Structures of Cobalamin-Independent Methionine Synthase (MetE) from Streptococcus mutans: A Dynamic Zinc-Inversion Model
J.Mol.Biol., 412:688-697, 2011
Cited by
PubMed Abstract: Cobalamin-independent methionine synthase (MetE) catalyzes the direct transfer of a methyl group from methyltetrahydrofolate to l-homocysteine to form methionine. Previous studies have shown that the MetE active site coordinates a zinc atom, which is thought to act as a Lewis acid and plays a role in the activation of thiol. Extended X-ray absorption fine structure studies and mutagenesis experiments identified the zinc-binding site in MetE from Escherichia coli. Further structural investigations of MetE from Thermotoga maritima lead to the proposition of two models: "induced fit" and "dynamic equilibrium", to account for the catalytic mechanisms of MetE. Here, we present crystal structures of oxidized and zinc-replete MetE from Streptococcus mutans at the physiological pH. The structures reveal that zinc is mobile in the active center and has the possibility to invert even in the absence of homocysteine. These structures provide evidence for the dynamic equilibrium model.
PubMed: 21840320
DOI: 10.1016/j.jmb.2011.08.005
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.187 Å)
Structure validation

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