Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4OT9
DownloadVisualize
BU of 4ot9 by Molmil
crystal structure of the C-terminal domain of p100/NF-kB2
Descriptor: Nuclear factor NF-kappa-B p100 subunit, SULFATE ION
Authors:Tao, Z.H, Huang, D.B, Fusco, A, Gupta, K, Ware, C.F, Duynne, G.V.
Deposit date:2014-02-13
Release date:2015-01-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:p100/I kappa B delta sequesters and inhibits NF-kappa B through kappaBsome formation.
Proc.Natl.Acad.Sci.USA, 111, 2014
2LEH
DownloadVisualize
BU of 2leh by Molmil
Solution structure of the core SMN-Gemin2 complex
Descriptor: Survival motor neuron protein, Survival of motor neuron protein-interacting protein 1
Authors:Sarachan, K.L, Valentine, K, Gupta, K, Moorman, V, Gledhill, J, Bernens, M, Tommos, C, Wand, A.J, Van Duyne, G.
Deposit date:2011-06-15
Release date:2012-06-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the core SMN-Gemin2 complex.
Biochem.J., 445, 2012
2M61
DownloadVisualize
BU of 2m61 by Molmil
NMR and Mass Spectrometric Studies of M-2 Branch Mini-M Conotoxins from Indian Cone Snails
Descriptor: Conotoxin Ar1446
Authors:Sarma, S.P, Rajesh, R.P, Kumar, G.S, Sudarslal, S, Sabareesh, V, Gowd, K.H, Gupta, K, Krishnan, K.S, Balaram, P.
Deposit date:2013-03-18
Release date:2014-04-16
Method:SOLUTION NMR
Cite:NMR and Mass Spectrometric Studies of M-2 Branch Mini-M Conotoxins from Indian Cone Snails
To be Published
1HT5
DownloadVisualize
BU of 1ht5 by Molmil
THE 2.75 ANGSTROM RESOLUTION MODEL OF OVINE COX-1 COMPLEXED WITH METHYL ESTER FLURBIPROFEN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLURBIPROFEN METHYL ESTER, PROSTAGLANDIN H2 SYNTHASE-1, ...
Authors:Selinsky, B.S, Gupta, K, Sharkey, C.T, Loll, P.J.
Deposit date:2000-12-28
Release date:2001-04-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural analysis of NSAID binding by prostaglandin H2 synthase: time-dependent and time-independent inhibitors elicit identical enzyme conformations.
Biochemistry, 40, 2001
1HT8
DownloadVisualize
BU of 1ht8 by Molmil
THE 2.7 ANGSTROM RESOLUTION MODEL OF OVINE COX-1 COMPLEXED WITH ALCLOFENAC
Descriptor: (3-CHLORO-4-PROPOXY-PHENYL)-ACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, PROSTAGLANDIN H2 SYNTHASE-1, ...
Authors:Selinsky, B.S, Gupta, K, Sharkey, C.T, Loll, P.J.
Deposit date:2000-12-29
Release date:2001-04-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural analysis of NSAID binding by prostaglandin H2 synthase: time-dependent and time-independent inhibitors elicit identical enzyme conformations.
Biochemistry, 40, 2001
1P4W
DownloadVisualize
BU of 1p4w by Molmil
Solution structure of the DNA-binding domain of the Erwinia amylovora RcsB protein
Descriptor: rcsB
Authors:Pristovsek, P, Sengupta, K, Loehr, F, Schaefer, B, Wehland von Trebra, M, Rueterjans, H, Bernhard, F.
Deposit date:2003-04-24
Release date:2003-06-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural analysis of the DNA-binding domain of the Erwinia amylovora RcsB protein and its interaction with the RcsAB box.
J.Biol.Chem., 278, 2003
5HRR
DownloadVisualize
BU of 5hrr by Molmil
HIV Integrase Catalytic Domain containing F185K + A124N + T125S mutations complexed with GSK0002
Descriptor: (2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid, 1,2-ETHANEDIOL, CACODYLATE ION, ...
Authors:Nolte, R.T.
Deposit date:2016-01-24
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase.
PLoS Biol., 14, 2016
5HRP
DownloadVisualize
BU of 5hrp by Molmil
HIV Integrase Catalytic Domain containing F185K + A124T mutations complexed with GSK0002
Descriptor: (2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid, 1,2-ETHANEDIOL, CACODYLATE ION, ...
Authors:Nolte, R.T.
Deposit date:2016-01-24
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase.
PLoS Biol., 14, 2016
5HRS
DownloadVisualize
BU of 5hrs by Molmil
HIV Integrase Catalytic Domain containing F185K + A124N + T125A mutations complexed with GSK0002
Descriptor: (2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid, 1,2-ETHANEDIOL, CACODYLATE ION, ...
Authors:Nolte, R.T.
Deposit date:2016-01-24
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase.
PLoS Biol., 14, 2016
5HRN
DownloadVisualize
BU of 5hrn by Molmil
HIV Integrase Catalytic Domain containing F185K mutation complexed with GSK0002
Descriptor: (2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid, 1,2-ETHANEDIOL, CACODYLATE ION, ...
Authors:Nolte, R.T.
Deposit date:2016-01-23
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase.
PLoS Biol., 14, 2016
3BVP
DownloadVisualize
BU of 3bvp by Molmil
Crystal Structure of the N-terminal Catalytic Domain of TP901-1 Integrase
Descriptor: TP901-1 Integrase
Authors:Yuan, P, Van Duyne, G.D.
Deposit date:2008-01-07
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Tetrameric structure of a serine integrase catalytic domain.
Structure, 16, 2008
6V0K
DownloadVisualize
BU of 6v0k by Molmil
Crystal structure of Penicillium verruculosum copalyl diphosphate synthase (PvCPS) alpha prenyltransferase domain
Descriptor: GLYCEROL, Terpene synthase
Authors:Christianson, D.W, Ronnebaum, T.A.
Deposit date:2019-11-18
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Higher-order oligomerization of a chimeric alpha beta gamma bifunctional diterpene synthase with prenyltransferase and class II cyclase activities is concentration-dependent.
J.Struct.Biol., 210, 2020
8EAX
DownloadVisualize
BU of 8eax by Molmil
Octameric prenyltransferase domain of fusicoccadiene Synthase with C2 symmetry sans transiently associating cyclase domains
Descriptor: Fusicoccadiene synthase
Authors:Faylo, J.L, van Eeuwen, T, Christianson, D.W.
Deposit date:2022-08-29
Release date:2022-11-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Transient Prenyltransferase-Cyclase Association in Fusicoccadiene Synthase, an Assembly-Line Terpene Synthase.
Biochemistry, 61, 2022
8C9N
DownloadVisualize
BU of 8c9n by Molmil
MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle
Descriptor: Penton protein
Authors:Bufton, J.C, Capin, J, Boruku, U, Garzoni, F, Schaffitzel, C, Berger, I.
Deposit date:2023-01-23
Release date:2023-12-06
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:In vitro generated antibodies guide thermostable ADDomer nanoparticle design for nasal vaccination and passive immunization against SARS-CoV-2.
Antib Ther, 6, 2023
7QUR
DownloadVisualize
BU of 7qur by Molmil
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry
Descriptor: 2,3,5-tris(iodanyl)benzamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Naismith, J.H, Yang, Y, Liu, J.W.
Deposit date:2022-01-18
Release date:2022-06-01
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (2.27 Å)
Cite:Pathogen-sugar interactions revealed by universal saturation transfer analysis.
Science, 377, 2022
7QUS
DownloadVisualize
BU of 7qus by Molmil
SARS-CoV-2 Spike, C3 symmetry
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, ...
Authors:Naismith, J.H, Yang, Y, Liu, J.W.
Deposit date:2022-01-18
Release date:2022-06-08
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Pathogen-sugar interactions revealed by universal saturation transfer analysis.
Science, 377, 2022
5JHQ
DownloadVisualize
BU of 5jhq by Molmil
ARCs 1-3 of human Tankyrase-1 bound to a peptide derived from IRAP
Descriptor: Peptide derived from insulin-responsive aminopeptidase (IRAP), Tankyrase-1
Authors:Eisemann, T, Pascal, J.M.
Deposit date:2016-04-21
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Tankyrase-1 Ankyrin Repeats Form an Adaptable Binding Platform for Targets of ADP-Ribose Modification.
Structure, 24, 2016
8RQN
DownloadVisualize
BU of 8rqn by Molmil
Human thyroid hormone receptor beta ligand binding domain in complex with beta-selective agonist ALG-055009
Descriptor: 6-azanyl-2-[3,5-bis(chloranyl)-4-[(6-oxidanylidene-5-propan-2-yl-1~{H}-pyridazin-3-yl)oxy]phenyl]-1,2,4-triazine-3,5-dione, Thyroid hormone receptor beta
Authors:Lammens, A, Maskos, K, Stoycheva, A.D, McGowan, D.C.
Deposit date:2024-01-18
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Discovery and Preclinical Profile of ALG-055009, a Potent and Selective Thyroid Hormone Receptor Beta (THR-beta ) Agonist for the Treatment of MASH.
J.Med.Chem., 67, 2024
8RQO
DownloadVisualize
BU of 8rqo by Molmil
Human thyroid hormone receptor alpha ligand binding domain in complex with beta-selective agonist ALG-055009
Descriptor: 6-azanyl-2-[3,5-bis(chloranyl)-4-[(6-oxidanylidene-5-propan-2-yl-1~{H}-pyridazin-3-yl)oxy]phenyl]-1,2,4-triazine-3,5-dione, Isoform Alpha-1 of Thyroid hormone receptor alpha, SULFATE ION
Authors:Lammens, A, Maskos, K, Stoycheva, A.D, McGowan, D.C.
Deposit date:2024-01-18
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Discovery and Preclinical Profile of ALG-055009, a Potent and Selective Thyroid Hormone Receptor Beta (THR-beta ) Agonist for the Treatment of MASH.
J.Med.Chem., 67, 2024
8EDV
DownloadVisualize
BU of 8edv by Molmil
Mitoguardin homolog (MIGA) delta TM residues 106-496 from Caenorhabditis elegans bound to modelled lipid phosphatidylethanolamine
Descriptor: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, MItoGuArdin homolog
Authors:Hong, Z, Adlakha, J, Reinisch, K.M.
Deposit date:2022-09-06
Release date:2022-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mitoguardin-2-mediated lipid transfer preserves mitochondrial morphology and lipid droplet formation.
J.Cell Biol., 221, 2022
4GLI
DownloadVisualize
BU of 4gli by Molmil
Crystal Structure of Human SMN YG-Dimer
Descriptor: Maltose-binding periplasmic protein, Survival motor neuron protein chimera
Authors:Martin, R.S, Perry, K, Van Duyne, G.D.
Deposit date:2012-08-14
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:The survival motor neuron protein forms soluble glycine zipper oligomers.
Structure, 20, 2012
6WXQ
DownloadVisualize
BU of 6wxq by Molmil
Crystal structure of CRISPR-associated transcription factor Csa3 complexed with cA4
Descriptor: CRISPR-associated transcription factor Csa3 (Type I-A), GLYCEROL, cyclic tetraadenylate
Authors:Xia, P, Dutta, A, Parashar, V.
Deposit date:2020-05-11
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of cyclic oligoadenylate binding to the transcription factor Csa3 outlines cross talk between type III and type I CRISPR systems.
J.Biol.Chem., 298, 2022
6N1K
DownloadVisualize
BU of 6n1k by Molmil
Full-length human phenylalanine hydroxylase (PAH) in the resting state
Descriptor: CHLORIDE ION, FE (III) ION, Phenylalanine-4-hydroxylase
Authors:Arturo, E.C, Jaffe, E.K.
Deposit date:2018-11-08
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.057 Å)
Cite:Biophysical characterization of full-length human phenylalanine hydroxylase provides a deeper understanding of its quaternary structure equilibrium.
J.Biol.Chem., 294, 2019
5G5J
DownloadVisualize
BU of 5g5j by Molmil
Crystal structure of human CYP3A4 bound to metformin
Descriptor: CYTOCHROME P450 3A4, Metformin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sevrioukova, I.
Deposit date:2016-05-25
Release date:2017-06-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Heme Binding Biguanides Target Cytochrome P450-Dependent Cancer Cell Mitochondria.
Cell Chem Biol, 24, 2017
6F3T
DownloadVisualize
BU of 6f3t by Molmil
Crystal structure of the human TAF5-TAF6-TAF9 complex
Descriptor: CHLORIDE ION, Transcription initiation factor TFIID subunit 5, Transcription initiation factor TFIID subunit 6, ...
Authors:Haffke, M, Berger, I.
Deposit date:2017-11-28
Release date:2018-12-05
Last modified:2018-12-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Chaperonin CCT checkpoint function in basal transcription factor TFIID assembly.
Nat. Struct. Mol. Biol., 25, 2018

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon