1YKD
  • Download 1ykd
  • View 1ykd
Molmil generated image of 1ykd
CRYSTAL STRUCTURE OF THE TANDEM GAF DOMAINS FROM A CYANOBACTERIAL ADENYLYL CYCLASE: NOVEL MODES OF LIGAND-BINDING AND DIMERIZATION
Descriptor:adenylate cyclase
Authors:Martinez, S.E., Bruder, S., Schultz, A., Zheng, N., Schultz, J.E., Beavo, J.A., Linder, J.U.
Deposit date:2005-01-17
Release date:2005-02-22
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the tandem GAF domains from a cyanobacterial adenylyl cyclase: Modes of ligand binding and dimerization
Proc.Natl.Acad.Sci.USA, 102, 2005
2K31
  • Download 2k31
  • View 2k31
Molmil generated image of 2k31
SOLUTION STRUCTURE OF CGMP-BINDING GAF DOMAIN OF PHOSPHODIESTERASE 5
Descriptor:Phosphodiesterase 5A, cGMP-specific (E.C.3.1.4.35)
Authors:Heikaus, C.C., Stout, J.R., Sekharan, M.R., Eakin, C.M., Rajagopal, P., Brzovic, P.S., Beavo, J.A., Klevit, R.E.
Deposit date:2008-04-16
Release date:2008-06-03
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Solution Structure of the cGMP Binding GAF Domain from Phosphodiesterase 5: Insights into Nucleotide Selectivity, Dimerization, and cGMP-Dependent Conformational Change.
J.Biol.Chem., 283, 2008
2LB5
  • Download 2lb5
  • View 2lb5
Molmil generated image of 2lb5
REFINED STRUCTURAL BASIS FOR THE PHOTOCONVERSION OF A PHYTOCHROME TO THE ACTIVATED FAR-RED LIGHT-ABSORBING FORM
Descriptor:Sensor histidine kinase
Authors:Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L.
Deposit date:2011-03-23
Release date:2011-06-29
Modification date:2014-01-01
Method:SOLUTION NMR
Cite:Structural basis for the photoconversion of a phytochrome to the activated Pfr form.
Nature, 463, 2010
2LB9
  • Download 2lb9
  • View 2lb9
Molmil generated image of 2lb9
REFINED SOLUTION STRUCTURE OF A CYANOBACTERIAL PHYTOCHROME GAF DOMAIN IN THE RED LIGHT-ABSORBING GROUND STATE (CORRECTED PYRROLE RING PLANARITY)
Descriptor:Sensor histidine kinase
Authors:Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L.
Deposit date:2011-03-23
Release date:2011-06-29
Modification date:2014-01-01
Method:SOLUTION NMR
Cite:Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state.
J.Mol.Biol., 383, 2008
2VJW
  • Download 2vjw
  • View 2vjw
Molmil generated image of 2vjw
CRYSTAL STRUCTURE OF THE SECOND GAF DOMAIN OF DEVS FROM MYCOBACTERIUM SMEGMATIS
Descriptor:GAF FAMILY PROTEIN
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2007-12-14
Release date:2008-08-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:O2- and No-Sensing Mechanism Through the Devsr Two- Component System in Mycobacterium Smegmatis.
J.Bacteriol., 190, 2008
2VKS
  • Download 2vks
  • View 2vks
Molmil generated image of 2vks
CRYSTAL STRUCTURE OF GAF-B DOMAIN OF DEVS FROM MYCOBACTERIUM SMEGMATIS
Descriptor:GAF FAMILY PROTEIN
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2007-12-25
Release date:2008-08-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:O2- and No-Sensing Mechanism Through the Devsr Two- Component System in Mycobacterium Smegmatis.
J.Bacteriol., 190, 2008
2VZW
  • Download 2vzw
  • View 2vzw
Molmil generated image of 2vzw
X-RAY STRUCTURE OF THE HEME-BOUND GAF DOMAIN OF SENSORY HISTIDINE KINASE DOST OF MYCOBACTERIUM TUBERCULOSIS
Descriptor:PROBABLE HISTIDINE KINASE RESPONSE REGULATOR
Authors:Podust, L.M., Ioanoviciu, A., Ortiz de Montellano, P.R.
Deposit date:2008-08-06
Release date:2009-03-17
Modification date:2013-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:2.3 A X-Ray Structure of the Heme-Bound Gaf Domain of Sensory Histidine Kinase Dost of Mycobacterium Tuberculosis.
Biochemistry, 47, 2008
2W3D
  • Download 2w3d
  • View 2w3d
Molmil generated image of 2w3d
STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3E
  • Download 2w3e
  • View 2w3e
Molmil generated image of 2w3e
OXIDIZED STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3F
  • Download 2w3f
  • View 2w3f
Molmil generated image of 2w3f
REDUCED STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2009-05-12
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3G
  • Download 2w3g
  • View 2w3g
Molmil generated image of 2w3g
AIR-OXIDIZED STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2009-05-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3H
  • Download 2w3h
  • View 2w3h
Molmil generated image of 2w3h
CYANIDE BOUND STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2009-05-12
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2XSS
  • Download 2xss
  • View 2xss
Molmil generated image of 2xss
CRYSTAL STRUCTURE OF GAFB FROM THE HUMAN PHOSPHODIESTERASE 5
Descriptor:CGMP-SPECIFIC 3', 5'-CYCLIC PHOSPHODIESTERASE (E.C.3.1.4.35)
Authors:Schlicker, C., Russwurm, M., Steegborn, C.
Deposit date:2010-09-30
Release date:2011-05-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Gaf-B Domain from Human Phosphodiesterase 5.
Proteins, 79, 2011
2Y79
  • Download 2y79
  • View 2y79
Molmil generated image of 2y79
STRUCTURE OF THE FIRST GAF DOMAIN E87A MUTANT OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:REDOX SENSOR HISTIDINE KINASE RESPONSE REGULATOR DEVS (E.C.2.7.13.3)
Authors:Cho, H.Y., Cho, H.J., Kang, B.S.
Deposit date:2011-01-30
Release date:2011-02-16
Modification date:2011-06-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Blockage of the Channel to Heme by the E87 Side Chain in the Gaf Domain of Mycobacterium Tuberculosis Doss Confers the Unique Sensitivity of Doss to Oxygen.
FEBS Lett., 585, 2011
2ZMF
  • Download 2zmf
  • View 2zmf
Molmil generated image of 2zmf
CRYSTAL STRUCTURE OF THE C-TERMINAL GAF DOMAIN OF HUMAN PHOSPHODIESTERASE 10A
Descriptor:cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A (E.C.3.1.4.17)
Authors:Handa, N., Kishishita, S., Mizohata, E., Omori, K., Kotera, J., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-17
Release date:2008-04-29
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the GAF-B Domain from Human Phosphodiesterase 10A Complexed with Its Ligand, cAMP
J.Biol.Chem., 283, 2008
3CI6
  • Download 3ci6
  • View 3ci6
Molmil generated image of 3ci6
CRYSTAL STRUCTURE OF THE GAF DOMAIN FROM ACINETOBACTER PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE
Descriptor:Phosphoenolpyruvate-protein phosphotransferase (E.C.2.7.3.9)
Authors:Cuff, M.E., Shackelford, G., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-10
Release date:2008-05-13
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase.
TO BE PUBLISHED
3DBA
  • Download 3dba
  • View 3dba
Molmil generated image of 3dba
CRYSTAL STRUCTURE OF THE CGMP-BOUND GAF A DOMAIN FROM THE PHOTORECEPTOR PHOSPHODIESTERASE 6C
Descriptor:Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' (E.C.3.1.4.35)
Authors:Martinez, S.E., Heikaus, C.C., Klevit, R.E., Beavo, J.A.
Deposit date:2008-05-30
Release date:2008-07-01
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The Structure of the GAF A Domain from Phosphodiesterase 6C Reveals Determinants of cGMP Binding, a Conserved Binding Surface, and a Large cGMP-dependent Conformational Change.
J.Biol.Chem., 283, 2008
3K2N
  • Download 3k2n
  • View 3k2n
Molmil generated image of 3k2n
THE CRYSTAL STRUCTURE OF SIGMA-54-DEPENDENT TRANSCRIPTIONAL REGULATOR DOMAIN FROM CHLOROBIUM TEPIDUM TLS
Descriptor:Sigma-54-dependent transcriptional regulator
Authors:Wu, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-09-30
Release date:2010-01-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium
To be Published
3LFV
  • Download 3lfv
  • View 3lfv
Molmil generated image of 3lfv
CRYSTAL STRUCTURE OF UNLIGANDED PDE5A GAF DOMAIN
Descriptor:cGMP-specific 3',5'-cyclic phosphodiesterase (E.C.3.1.4.35)
Authors:Wang, H., Robinson, H., Ke, H.
Deposit date:2010-01-18
Release date:2010-09-22
Modification date:2011-01-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformation changes, N-terminal involvement, and cGMP signal relay in the phosphodiesterase-5 GAF domain.
J.Biol.Chem., 285, 2010
3MF0
  • Download 3mf0
  • View 3mf0
Molmil generated image of 3mf0
CRYSTAL STRUCTURE OF PDE5A GAF DOMAIN (89-518)
Descriptor:cGMP-specific 3',5'-cyclic phosphodiesterase (E.C.3.1.4.35)
Authors:Wang, H., Robinson, H., Ke, H.
Deposit date:2010-04-01
Release date:2010-09-22
Modification date:2011-01-05
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Conformation changes, N-terminal involvement, and cGMP signal relay in the phosphodiesterase-5 GAF domain.
J.Biol.Chem., 285, 2010
3O5Y
  • Download 3o5y
  • View 3o5y
Molmil generated image of 3o5y
THE CRYSTAL STRUCTURE OF THE GAF DOMAIN OF A TWO-COMPONENT SENSOR HISTIDINE KINASE FROM BACILLUS HALODURANS TO 2.45A
Descriptor:Sensor protein (E.C.2.7.13.3)
Authors:Stein, A.J., Mack, J., Buck, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-07-28
Release date:2010-08-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Crystal Structure of the GAF domain of a two-component sensor histidine kinase from Bacillus halodurans to 2.45A
To be Published
3P01
  • Download 3p01
  • View 3p01
Molmil generated image of 3p01
CRYSTAL STRUCTURE OF TWO-COMPONENT RESPONSE REGULATOR FROM NOSTOC SP. PCC 7120
Descriptor:Two-component response regulator
Authors:Chang, C., Mack, J., Feldman, B., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-09-27
Release date:2010-10-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of two-component response regulator from Nostoc sp. PCC 7120
TO BE PUBLISHED
3TRC
  • Download 3trc
  • View 3trc
Molmil generated image of 3trc
STRUCTURE OF THE GAF DOMAIN FROM A PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE (PTSP) FROM COXIELLA BURNETII
Descriptor:Phosphoenolpyruvate-protein phosphotransferase (E.C.2.7.3.9)
Authors:Cheung, J., Franklin, M.C., Rudolph, M., Cassidy, M., Gary, E., Burshteyn, F., Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Modification date:2016-02-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3W2Z
  • Download 3w2z
  • View 3w2z
Molmil generated image of 3w2z
CRYSTAL STRUCTURE OF THE CYANOBACTERIAL PROTEIN
Descriptor:Methyl-accepting chemotaxis protein
Authors:Narikawa, R., Muraki, N., Shiba, T., Kurisu, G., Ikeuchi, M.
Deposit date:2012-12-06
Release date:2013-01-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism
Proc.Natl.Acad.Sci.USA, 110, 2013
4G3K
  • Download 4g3k
  • View 4g3k
Molmil generated image of 4g3k
CRYSTAL STRUCTURE OF A. AEOLICUS NLH1 GAF DOMAIN IN AN INACTIVE STATE
Descriptor:Transcriptional regulator NifA
Authors:Wemmer, D.E., Batchelor, J.D., Wang, A., Lee, P., Doucleff, M.
Deposit date:2012-07-14
Release date:2013-05-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
PDBj@FacebookPDBj@TwitterwwPDBwwPDB FoundationEM DataBank

Copyright © 2013-2017 Protein Data Bank Japan