6DGQ
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with CAY10506
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97741 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.200, 59.490, 116.730 |
Unit cell angles | 90.00, 103.55, 90.00 |
Refinement procedure
Resolution | 45.480 - 2.450 |
R-factor | 0.1961 |
Rwork | 0.191 |
R-free | 0.24670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1prg |
RMSD bond length | 0.008 |
RMSD bond angle | 1.046 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.480 | 2.538 |
High resolution limit [Å] | 2.450 | 2.450 |
Number of reflections | 22240 | 2193 |
<I/σ(I)> | 12.38 | 2.89 |
Completeness [%] | 97.3 | 96.95 |
Redundancy | 2 | 2 |
CC(1/2) | 0.998 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.8M SODIUM CITRATE, 100mM Tris, pH 7.6 |