3ONI
Crystal Structure of the second bromodomain of human BRD2 in complex with the inhibitor JQ1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2010-03-22 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.542 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 52.600, 71.710, 31.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.160 - 1.610 |
R-factor | 0.1502 |
Rwork | 0.148 |
R-free | 0.18370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Ensemble of 3HMH 2nxb 2oo1 2oss 2ouo 2rfj 3dai 3d7c 3dwy |
RMSD bond length | 0.016 |
RMSD bond angle | 1.724 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.160 | 27.320 | 1.700 |
High resolution limit [Å] | 1.610 | 5.090 | 1.610 |
Rmerge | 0.055 | 0.031 | 0.240 |
Total number of observations | 1872 | 7008 | |
Number of reflections | 16213 | ||
<I/σ(I)> | 16.1 | 16.5 | 2.6 |
Completeness [%] | 99.5 | 98.8 | 97 |
Redundancy | 3.4 | 3.2 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 30% Jeffamine600, 0.5M CsCl, 5% glycerol, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |