Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB形式変換不可の PDB エントリー
7T1X
DownloadVisualize
BU of 7t1x by Molmil
Crystal structure of human Fab A194-01 in complex with its synthetic heptasaccharide Ara6-Man epitope (BSI110888)
分子名称: 1,2-ETHANEDIOL, Fab A194-01 heavy chain, Fab A194-01 light chain, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2021-12-02
公開日2022-12-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of human Fab A194-01 in complex with its synthetic heptasaccharide Ara6-Man epitope (BSI110888)
to be published
7T3P
DownloadVisualize
BU of 7t3p by Molmil
IP3 and ATP bound type 3 IP3 receptor in the pre-active A state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 3, ...
著者Schmitz, E.A, Takahashi, H, Karakas, E.
登録日2021-12-08
公開日2022-03-23
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for activation and gating of IP 3 receptors.
Nat Commun, 13, 2022
7T3Q
DownloadVisualize
BU of 7t3q by Molmil
IP3 and ATP bound type 3 IP3 receptor in the pre-active B state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 3, ...
著者Schmitz, E.A, Takahashi, H, Karakas, E.
登録日2021-12-08
公開日2022-03-23
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for activation and gating of IP 3 receptors.
Nat Commun, 13, 2022
7T3R
DownloadVisualize
BU of 7t3r by Molmil
IP3 and ATP bound type 3 IP3 receptor in the pre-active C state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 3, ...
著者Schmitz, E.A, Takahashi, H, Karakas, E.
登録日2021-12-08
公開日2022-03-23
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for activation and gating of IP 3 receptors.
Nat Commun, 13, 2022
7T3T
DownloadVisualize
BU of 7t3t by Molmil
IP3, ATP, and Ca2+ bound type 3 IP3 receptor in the active state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
著者Schmitz, E.A, Takahashi, H, Karakas, E.
登録日2021-12-08
公開日2022-03-23
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis for activation and gating of IP 3 receptors.
Nat Commun, 13, 2022
7T64
DownloadVisualize
BU of 7t64 by Molmil
Rabbit RyR1 disease mutant Y523S in complex with FKBP12.6 embedded in lipidic nanodisc in the closed state
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ZINC ION
著者Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
登録日2021-12-13
公開日2022-07-20
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Molecular mechanism of the severe MH/CCD mutation Y522S in skeletal ryanodine receptor (RyR1) by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T65
DownloadVisualize
BU of 7t65 by Molmil
Rabbit RyR1 disease mutant Y523S in complex with FKBP12.6 embedded in lipidic nanodisc in the open state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ...
著者Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
登録日2021-12-13
公開日2022-07-20
最終更新日2022-08-03
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Molecular mechanism of the severe MH/CCD mutation Y522S in skeletal ryanodine receptor (RyR1) by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T66
DownloadVisualize
BU of 7t66 by Molmil
Co-crystal structure of Chaetomium glucosidase with compound UV-4
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chaetomium alpha glucosidase, ...
著者Karade, S.S, Mariuzza, R.A.
登録日2021-12-13
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Identification of Endoplasmic Reticulum alpha-Glucosidase I from a Thermophilic Fungus as a Platform for Structure-Guided Antiviral Drug Design.
Biochemistry, 61, 2022
7T68
DownloadVisualize
BU of 7t68 by Molmil
Co-crystal structure of Chaetomium glucosidase with compound UV-5
分子名称: (2R,3R,4R,5S)-1-[6-(4-azido-2-nitroanilino)hexyl]-2-(hydroxymethyl)piperidine-3,4,5-triol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Karade, S.S, Mariuzza, R.A.
登録日2021-12-13
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Identification of Endoplasmic Reticulum alpha-Glucosidase I from a Thermophilic Fungus as a Platform for Structure-Guided Antiviral Drug Design.
Biochemistry, 61, 2022
7T6W
DownloadVisualize
BU of 7t6w by Molmil
Crystal structure of Chaetomium Glucosidase I (apo)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chaetomium alpha glucosidase, GLYCEROL, ...
著者Karade, S.S, Mariuzza, R.A.
登録日2021-12-14
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Identification of Endoplasmic Reticulum alpha-Glucosidase I from a Thermophilic Fungus as a Platform for Structure-Guided Antiviral Drug Design.
Biochemistry, 61, 2022
7T73
DownloadVisualize
BU of 7t73 by Molmil
HIV-1 Envelope ApexGT2.2MUT in complex with PCT64.LMCA Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV Envelope ApexGT2.2MUT gp120, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-14
公開日2022-09-28
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Human immunoglobulin repertoire analysis guides design of vaccine priming immunogens targeting HIV V2-apex broadly neutralizing antibody precursors.
Immunity, 55, 2022
7T74
DownloadVisualize
BU of 7t74 by Molmil
HIV-1 Envelope ApexGT2 in complex with PCT64.35S Fab and RM20A3 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV Envelope ApexGT2 gp120, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-14
公開日2022-09-28
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Human immunoglobulin repertoire analysis guides design of vaccine priming immunogens targeting HIV V2-apex broadly neutralizing antibody precursors.
Immunity, 55, 2022
7T75
DownloadVisualize
BU of 7t75 by Molmil
HIV-1 Envelope ApexGT2 in complex with RM20A3 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV Envelope ApexGT2 gp120, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-14
公開日2022-09-28
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Human immunoglobulin repertoire analysis guides design of vaccine priming immunogens targeting HIV V2-apex broadly neutralizing antibody precursors.
Immunity, 55, 2022
7T76
DownloadVisualize
BU of 7t76 by Molmil
HIV-1 Envelope ApexGT3 in complex with PG9.iGL Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV Envelope ApexGT3 gp120, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-14
公開日2022-09-28
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (4.43 Å)
主引用文献Human immunoglobulin repertoire analysis guides design of vaccine priming immunogens targeting HIV V2-apex broadly neutralizing antibody precursors.
Immunity, 55, 2022
7T77
DownloadVisualize
BU of 7t77 by Molmil
HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV Envelope ApexGT3.N130 gp120, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-14
公開日2022-09-28
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (4.75 Å)
主引用文献Human immunoglobulin repertoire analysis guides design of vaccine priming immunogens targeting HIV V2-apex broadly neutralizing antibody precursors.
Immunity, 55, 2022
7T7C
DownloadVisualize
BU of 7t7c by Molmil
The hexagonal organization of Munc13-1 C1-C2B-MUN-C2C domains between lipid bilayers
分子名称: Protein unc-13 homolog A Chimera
著者Grushin, K, Sindelar, C.V.
登録日2021-12-15
公開日2022-02-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Munc13 structural transitions and oligomers that may choreograph successive stages in vesicle priming for neurotransmitter release.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T81
DownloadVisualize
BU of 7t81 by Molmil
Model of Munc13-1 C1-C2B-MUN-C2C 2D crystal between lipid bilayers.
分子名称: Protein unc-13 homolog A
著者Grushin, K, Sindelar, C.V.
登録日2021-12-15
公開日2022-02-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Munc13 structural transitions and oligomers that may choreograph successive stages in vesicle priming for neurotransmitter release.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T8N
DownloadVisualize
BU of 7t8n by Molmil
Crystal structure of the PNAG binding module PgaA-TPR 220-359
分子名称: CHLORIDE ION, MAGNESIUM ION, Poly-beta-1,6-N-acetyl-D-glucosamine export protein
著者Pfoh, R, Little, D.J, Howell, P.L.
登録日2021-12-16
公開日2022-08-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The TPR domain of PgaA is a multifunctional scaffold that binds PNAG and modulates PgaB-dependent polymer processing.
Plos Pathog., 18, 2022
7T8O
DownloadVisualize
BU of 7t8o by Molmil
Crystal Structure of the Crp/Fnr Family Transcriptional Regulator from Listeria monocytogenes
分子名称: Lmo0753 protein, SULFATE ION
著者Kim, Y, Makowska-Grzyska, M, Maltseva, N, Shatsman, S, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-16
公開日2021-12-29
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Crystal Structure of the Crp/Fnr Family Transcriptional Regulator from Listeria monocytogenes
To Be Published
7T8V
DownloadVisualize
BU of 7t8v by Molmil
Co-crystal structure of Chaetomium glucosidase I with EB-0159
分子名称: (1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-[(6-{[2-nitro-4-(1H-1,2,3-triazol-1-yl)phenyl]amino}hexyl)amino]cyclohexane-1,2,3,4-tetrol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Karade, S.S, Mariuzza, R.A.
登録日2021-12-17
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of Endoplasmic Reticulum alpha-Glucosidase I from a Thermophilic Fungus as a Platform for Structure-Guided Antiviral Drug Design.
Biochemistry, 61, 2022
7T9A
DownloadVisualize
BU of 7t9a by Molmil
ApexGT2 in complex with GT2-d42.16 and RM20A3 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GT2-d42.16 Fab Heavy Chain, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-18
公開日2022-09-28
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Priming HIV Envelope V2 Apex-directed broadly neutralizing antibody responses with protein or mRNA immunogens
Immunity, 2022
7T9B
DownloadVisualize
BU of 7t9b by Molmil
ApexGT5 in complex with GT5-d42.16 and RM20A3 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-18
公開日2022-09-28
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Priming HIV Envelope V2 Apex-directed broadly neutralizing antibody responses with protein or mRNA immunogens
Immunity, 2022
7T9E
DownloadVisualize
BU of 7t9e by Molmil
Crystal structure of dehaloperoxidase B in complex with +(-)-limonene oxide
分子名称: (1R,4R,6S)-1-methyl-4-(prop-1-en-2-yl)-7-oxabicyclo[4.1.0]heptane, Dehaloperoxidase B, GLYCEROL, ...
著者de Serrano, V.S, Ghiladi, R.A, Malewschik, T, Yun, D.
登録日2021-12-18
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
7T9T
DownloadVisualize
BU of 7t9t by Molmil
Cryo-EM structure of CH235.12 in complex with HIV-1 Env trimer CH505TF.N279K.SOSIP.664 with complex glycans
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Manne, K, Acharya, P.
登録日2021-12-20
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of CH235.12 in complex with HIV-1 Env trimer CH505TF.N279K.G458Y.SOSIP.664
To Be Published
7TAU
DownloadVisualize
BU of 7tau by Molmil
Refined capsid structure of human adenovirus D26 at 3.4 A resolution
分子名称: Fiber, Hexon protein, PIX, ...
著者Reddy, V.S, Yu, X, Barry, M.A.
登録日2021-12-21
公開日2022-03-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Refined Capsid Structure of Human Adenovirus D26 at 3.4 angstrom Resolution.
Viruses, 14, 2022

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon