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Legacy flatfile-incompatible PDB entries
8GZU
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BU of 8gzu by Molmil
Cryo-EM structure of Tetrahymena thermophila respiratory Megacomplex MC (IV2+I+III2+II)2
Descriptor: 2 iron, 2 sulfur cluster-binding protein, 2-oxoglutarate/malate carrier protein, ...
Authors:Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2022-09-27
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Nat Commun, 14, 2023
8H1C
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BU of 8h1c by Molmil
Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase in complex with two tRNAs (one in tRNA binding state and the other in tRNA locked state)
Descriptor: Glycine--tRNA ligase, tRNA(gly) (74-MER)
Authors:Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J.
Deposit date:2022-10-02
Release date:2023-04-26
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase.
Nucleic Acids Res., 51, 2023
8H1R
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BU of 8h1r by Molmil
Crystal structure of LptDE-YifL complex
Descriptor: (2R)-3-{[(2S)-3-HYDROXY-2-(PALMITOYLAMINO)PROPYL]THIO}PROPANE-1,2-DIYL DIHEXADECANOATE, LPS-assembly lipoprotein LptE, LPS-assembly protein LptD, ...
Authors:Luo, Q, Huang, Y.
Deposit date:2022-10-03
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Lipoprotein sorting to the cell surface via a crosstalk between the Lpt and Lol pathways during outer membrane biogenesis
To Be Published
8H1S
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BU of 8h1s by Molmil
Crystal structure of apo-LptDE complex
Descriptor: LPS-assembly lipoprotein LptE, LPS-assembly protein LptD
Authors:Luo, Q, Huang, Y.
Deposit date:2022-10-03
Release date:2023-10-11
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Lipoprotein sorting to the cell surface via a crosstalk between the Lpt and Lol pathways during outer membrane biogenesis
To Be Published
8H2I
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BU of 8h2i by Molmil
Near-atomic structure of five-fold averaged PBCV-1 capsid
Descriptor: MCPv1, MCPv2, MCPv3, ...
Authors:Shao, Q, Agarkova, I.V, Noel, E.A, Dunigan, D.D, Liu, Y, Wang, A, Guo, M, Xie, L, Zhao, X, Rossmann, M.G, Van Etten, J.L, Klose, T, Fang, Q.
Deposit date:2022-10-06
Release date:2022-11-16
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Near-atomic, non-icosahedrally averaged structure of giant virus Paramecium bursaria chlorella virus 1.
Nat Commun, 13, 2022
8H2R
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BU of 8h2r by Molmil
Escherichia Coli Heat Labile Enterotoxin Type IIB B-Pentamer Circular Permutant CP52-53
Descriptor: Heat-labile enterotoxin IIB, B chain
Authors:Hsu, S.H, Yuan, Y.T, Sue, S.C.
Deposit date:2022-10-06
Release date:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Escherichia Coli Heat Labile Enterotoxin Type IIB B-Pentamer Circular Permutant CP52-53
To Be Published
8H6E
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BU of 8h6e by Molmil
Cryo-EM structure of human exon-defined spliceosome in the late pre-B state.
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y.
Deposit date:2022-10-17
Release date:2024-05-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
8H6J
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BU of 8h6j by Molmil
Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Zhang, W, Zhan, X, Zhang, X, Lei, J, Yan, C, Shi, Y.
Deposit date:2022-10-18
Release date:2024-05-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
8H6K
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BU of 8h6k by Molmil
Cryo-EM structure of human exon-defined spliceosome in the mature B state.
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y.
Deposit date:2022-10-18
Release date:2024-05-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
8H6L
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BU of 8h6l by Molmil
Cryo-EM structure of human exon-defined spliceosome in the early B state.
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y.
Deposit date:2022-10-18
Release date:2024-05-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
8H9E
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BU of 8h9e by Molmil
Human ATP synthase F1 domain, state 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit O, ...
Authors:Lai, Y, Zhang, Y, Liu, F, Gao, Y, Gong, H, Rao, Z.
Deposit date:2022-10-25
Release date:2023-05-31
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structure of the human ATP synthase.
Mol.Cell, 83, 2023
8H9I
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BU of 8h9i by Molmil
Human ATP synthase F1 domain, state2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit O, ...
Authors:Lai, Y, Zhang, Y, Liu, F, Gao, Y, Gong, H, Rao, Z.
Deposit date:2022-10-25
Release date:2023-05-31
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Structure of the human ATP synthase.
Mol.Cell, 83, 2023
8H9L
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BU of 8h9l by Molmil
Human ATP synthase F1 domain, state 3a
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit O, ...
Authors:Lai, Y, Zhang, Y, Liu, F, Gao, Y, Gong, H, Rao, Z.
Deposit date:2022-10-25
Release date:2023-05-31
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Structure of the human ATP synthase.
Mol.Cell, 83, 2023
8H9P
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BU of 8h9p by Molmil
Human ATP synthase F1 domain, state 3b
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit O, ...
Authors:Lai, Y, Zhang, Y, Liu, F, Gao, Y, Gong, H, Rao, Z.
Deposit date:2022-10-25
Release date:2023-05-31
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structure of the human ATP synthase.
Mol.Cell, 83, 2023
8H9S
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BU of 8h9s by Molmil
Human ATP synthase state 1 (combined)
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Lai, Y, Zhang, Y, Liu, F, Gao, Y, Gong, H, Rao, Z.
Deposit date:2022-10-25
Release date:2023-05-31
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structure of the human ATP synthase.
Mol.Cell, 83, 2023
8H9T
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BU of 8h9t by Molmil
Human ATP synthase state 2 (combined)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F(0) complex subunit B1, ...
Authors:Lai, Y, Zhang, Y, Liu, F, Gao, Y, Gong, H, Rao, Z.
Deposit date:2022-10-25
Release date:2023-05-31
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Structure of the human ATP synthase.
Mol.Cell, 83, 2023
8H9U
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BU of 8h9u by Molmil
Human ATP synthase state 3a (combined)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F(0) complex subunit B1, ...
Authors:Lai, Y, Zhang, Y, Liu, F, Gao, Y, Gong, H, Rao, Z.
Deposit date:2022-10-25
Release date:2023-05-31
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Structure of the human ATP synthase.
Mol.Cell, 83, 2023
8HAS
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BU of 8has by Molmil
NARROW LEAF 1-close from Japonica
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein NARROW LEAF 1
Authors:Zhang, S.J, He, Y.J, Wang, N, Zhang, W.J, Liu, C.M.
Deposit date:2022-10-26
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:NARROW LEAF 1-close from Japonica
To Be Published
8HAU
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BU of 8hau by Molmil
NARROW LEAF 1 from Indica
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein NARROW LEAF 1
Authors:Zhang, S.J, He, Y.J, Wang, N, Zhang, W.J, Liu, C.M.
Deposit date:2022-10-26
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:NARROW LEAF 1 from Indica
To Be Published
8HB9
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BU of 8hb9 by Molmil
Crystal Structure of Human IDH1 R132H Mutant in Complex with NADPH and Compound IHMT-IDH1-053
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Isocitrate dehydrogenase [NADP] cytoplasmic, ...
Authors:Guo, G, Wang, B, Liu, J, Liu, Q.
Deposit date:2022-10-27
Release date:2023-05-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based discovery of IHMT-IDH1-053 as a potent irreversible IDH1 mutant selective inhibitor.
Eur.J.Med.Chem., 256, 2023
8HC1
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BU of 8hc1 by Molmil
CryoEM structure of Helicobacter pylori UreFD/urease complex
Descriptor: Urease accessory protein UreF, Urease accessory protein UreH, Urease subunit alpha, ...
Authors:Nim, Y.S, Fong, I.Y.H, Deme, J, Tsang, K.L, Caesar, J, Johnson, S, Wong, K.B, Lea, S.M.
Deposit date:2022-11-01
Release date:2023-05-03
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Delivering a toxic metal to the active site of urease.
Sci Adv, 9, 2023
8HC2
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BU of 8hc2 by Molmil
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 1 YB9-258 Fab (1 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB9-258 Fab, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (6.21 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
8HC9
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BU of 8hc9 by Molmil
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (3 RBD down)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB13-292 Fab, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (6.03 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
8HDR
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BU of 8hdr by Molmil
Cyanophage Pam3 neck
Descriptor: Pam3 adaptor protein, Pam3 connector protein, Pam3 sheath protein, ...
Authors:Yang, F, Jiang, Y.L, Zhou, C.Z.
Deposit date:2022-11-06
Release date:2023-02-01
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Fine structure and assembly pattern of a minimal myophage Pam3.
Proc.Natl.Acad.Sci.USA, 120, 2023
8HEX
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BU of 8hex by Molmil
C5 portal vertex in HCMV B-capsid
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Major capsid protein, ...
Authors:Li, Z, Yu, X.
Deposit date:2022-11-08
Release date:2023-11-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023

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PDB entries from 2024-09-11

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