- PDB-6qx2: 3.4A structure of benzoisoxazole 3 with S.aureus DNA gyrase and DNA -
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基本情報
登録情報
データベース: PDB / ID: 6qx2
タイトル
3.4A structure of benzoisoxazole 3 with S.aureus DNA gyrase and DNA
要素
(DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)- ...) x 3
(DNA gyrase subunit ...) x 9
キーワード
ISOMERASE / Inhibitor / DNA complex
機能・相同性
機能・相同性情報
DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex / DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity / DNA negative supercoiling activity / DNA topoisomerase (ATP-hydrolysing) / DNA topological change / DNA-templated DNA replication / chromosome / response to antibiotic / DNA binding / ATP binding ...DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex / DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity / DNA negative supercoiling activity / DNA topoisomerase (ATP-hydrolysing) / DNA topological change / DNA-templated DNA replication / chromosome / response to antibiotic / DNA binding / ATP binding / metal ion binding / cytoplasm 類似検索 - 分子機能
DNA gyrase, subunit A / DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat / DNA gyrase/topoisomerase IV, subunit A, C-terminal / : / DNA gyrase C-terminal domain, beta-propeller / DNA gyrase subunit B, TOPRIM domain / DNA gyrase, subunit B / DNA topoisomerase, type IIA, subunit B / Topoisomerase (Topo) IIA-type catalytic domain profile. / DNA gyrase B subunit, C-terminal ...DNA gyrase, subunit A / DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat / DNA gyrase/topoisomerase IV, subunit A, C-terminal / : / DNA gyrase C-terminal domain, beta-propeller / DNA gyrase subunit B, TOPRIM domain / DNA gyrase, subunit B / DNA topoisomerase, type IIA, subunit B / Topoisomerase (Topo) IIA-type catalytic domain profile. / DNA gyrase B subunit, C-terminal / DNA gyrase B subunit, carboxyl terminus / DNA topoisomerase, type IIA, alpha-helical domain superfamily / DNA topoisomerase, type IIA, domain A / DNA topoisomerase, type IIA, domain A, alpha-beta / DNA gyrase/topoisomerase IV, subunit A / DNA Topoisomerase IV / DNA topoisomerase, type IIA, subunit B, domain 2 / DNA gyrase B / DNA topoisomerase, type IIA / DNA topoisomerase, type IIA, conserved site / DNA topoisomerase II signature. / TopoisomeraseII / DNA topoisomerase, type IIA, subunit B, C-terminal / Toprim domain / DNA topoisomerase, type IIA-like domain superfamily / Toprim domain profile. / TOPRIM domain / Histidine kinase/HSP90-like ATPase / Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase / Histidine kinase-like ATPases / Histidine kinase/HSP90-like ATPase superfamily / Ribosomal protein S5 domain 2-type fold, subgroup / Ribosomal protein S5 domain 2-type fold 類似検索 - ドメイン・相同性
Chem-JK8 / DNA / DNA (> 10) / DNA gyrase subunit B / DNA gyrase subunit B / DNA gyrase subunit B / DNA gyrase subunit B / DNA gyrase subunit B / DNA gyrase subunit A 類似検索 - 構成要素
#241 - 2020年1月 20年の分子を振り返って (Twenty Years of Molecules) 類似性 (1)
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集合体
登録構造単位
B: DNA gyrase subunit B,DNA gyrase subunit B A: DNA gyrase subunit A D: DNA gyrase subunit B,DNA gyrase subunit B C: DNA gyrase subunit A E: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') F: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') K: DNA gyrase subunit B,DNA gyrase subunit B J: DNA gyrase subunit A M: DNA gyrase subunit B,DNA gyrase subunit B L: DNA gyrase subunit A N: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') O: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') S: DNA gyrase subunit B,DNA gyrase subunit B R: DNA gyrase subunit A U: DNA gyrase subunit B,DNA gyrase subunit B T: DNA gyrase subunit A V: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') W: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') b: DNA gyrase subunit B,DNA gyrase subunit B a: DNA gyrase subunit A d: DNA gyrase subunit B,DNA gyrase subunit B c: DNA gyrase subunit A e: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') f: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') k: DNA gyrase subunit B,DNA gyrase subunit B j: DNA gyrase subunit A m: DNA gyrase subunit B,DNA gyrase subunit B l: DNA gyrase subunit A n: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') o: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') s: DNA gyrase subunit B,DNA gyrase subunit B r: DNA gyrase subunit A u: DNA gyrase subunit B,DNA gyrase subunit B t: DNA gyrase subunit A v: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') w: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') ヘテロ分子
B: DNA gyrase subunit B,DNA gyrase subunit B A: DNA gyrase subunit A D: DNA gyrase subunit B,DNA gyrase subunit B C: DNA gyrase subunit A E: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') F: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') ヘテロ分子
K: DNA gyrase subunit B,DNA gyrase subunit B J: DNA gyrase subunit A M: DNA gyrase subunit B,DNA gyrase subunit B L: DNA gyrase subunit A N: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') O: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') ヘテロ分子
S: DNA gyrase subunit B,DNA gyrase subunit B R: DNA gyrase subunit A U: DNA gyrase subunit B,DNA gyrase subunit B T: DNA gyrase subunit A V: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') W: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') ヘテロ分子
b: DNA gyrase subunit B,DNA gyrase subunit B a: DNA gyrase subunit A d: DNA gyrase subunit B,DNA gyrase subunit B c: DNA gyrase subunit A e: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') f: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') ヘテロ分子
k: DNA gyrase subunit B,DNA gyrase subunit B j: DNA gyrase subunit A m: DNA gyrase subunit B,DNA gyrase subunit B l: DNA gyrase subunit A n: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') o: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') ヘテロ分子
s: DNA gyrase subunit B,DNA gyrase subunit B r: DNA gyrase subunit A u: DNA gyrase subunit B,DNA gyrase subunit B t: DNA gyrase subunit A v: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') w: DNA (5'-D(*GP*AP*GP*CP*GP*TP*AP*CP*GP*GP*CP*CP*GP*TP*AP*CP*GP*CP*TP*T)-3') ヘテロ分子