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Structure paper

TitleThe Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
Journal, issue, pagesJ. Struct. Funct. Genomics, Vol. 11, Page 167-, Year 2010
Publish dateJun 22, 2006 (structure data deposition date)
AuthorsOke, M. / Carter, L.G. / Johnson, K.A. / Liu, H. / Mcmahon, S.A. / Yan, X. / Kerou, M. / Weikart, N.D. / Kadi, N. / Sheikh, M.A. ...Oke, M. / Carter, L.G. / Johnson, K.A. / Liu, H. / Mcmahon, S.A. / Yan, X. / Kerou, M. / Weikart, N.D. / Kadi, N. / Sheikh, M.A. / Schmelz, S. / Dorward, M. / Zawadzki, M. / Cozens, C. / Falconer, H. / Powers, H. / Overton, I.M. / Van Niekerk, C.A.J. / Peng, X. / Patel, P. / Garrett, R.A. / Prangishvili, D. / Botting, C.H. / Coote, P.J. / Dryden, D.T.F. / Barton, G.J. / Schwarz-Linek, U. / Challis, G.L. / Taylor, G.L. / White, M.F. / Naismith, J.H.
External linksJ. Struct. Funct. Genomics / PubMed:20419351
MethodsX-ray diffraction
Resolution1.1 - 2.9 Å
Structure data

PDB-2ivy:
Crystal structure of hypothetical protein sso1404 from Sulfolobus solfataricus P2
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-2jg5:
CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHOFRUCTOKINASE FROM STAPHYLOCOCCUS AUREUS
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-2jg6:
CRYSTAL STRUCTURE OF A 3-METHYLADENINE DNA GLYCOSYLASE I FROM STAPHYLOCOCCUS AUREUS
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-2vw8:
Crystal Structure of Quinolone signal response protein pqsE from Pseudomonas aeruginosa
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-2vxz:
Crystal Structure of hypothetical protein PyrSV_gp04 from Pyrobaculum spherical virus
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-2wj9:
ArdB
Method: X-RAY DIFFRACTION / Resolution: 1.62 Å

PDB-2x0o:
Apo structure of the Alcaligin biosynthesis protein C (AlcC) from Bordetella bronchiseptica
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-2x3d:
Crystal Structure of SSo6206 from Sulfolobus solfataricus P2
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-2x3e:
Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase III, FabH from Pseudomonas aeruginosa PAO1
Method: X-RAY DIFFRACTION / Resolution: 1.81 Å

PDB-2x3f:
Crystal Structure of the Methicillin-Resistant Staphylococcus aureus Sar2676, a Pantothenate Synthetase.
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-2x3g:
Crystal Structure of the hypothetical protein ORF119 from Sulfolobus islandicus rod-shaped virus 1
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-2x3l:
Crystal Structure of the Orn_Lys_Arg decarboxylase family protein SAR0482 from Methicillin-resistant Staphylococcus aureus
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-2x3m:
Crystal Structure of Hypothetical Protein ORF239 from Pyrobaculum Spherical Virus
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-2x3n:
Crystal structure of pqsL, a probable FAD-dependent monooxygenase from Pseudomonas aeruginosa
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-2x3o:
Crystal Structure of the Hypothetical Protein PA0856 from Pseudomonas aeruginosa
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-2x48:
ORF 55 from Sulfolobus islandicus rudivirus 1
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-2x4g:
Crystal structure of PA4631, a nucleoside-diphosphate-sugar epimerase from Pseudomonas aeruginosa
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

PDB-2x4h:
Crystal Structure of the hypothetical protein SSo2273 from Sulfolobus solfataricus
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-2x4i:
ORF 114a from Sulfolobus islandicus rudivirus 1
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2x4j:
Crystal structure of ORF137 from Pyrobaculum spherical virus
Method: X-RAY DIFFRACTION / Resolution: 1.62 Å

PDB-2x4k:
Crystal structure of SAR1376, a putative 4-oxalocrotonate tautomerase from the methicillin-resistant Staphylococcus aureus (MRSA)
Method: X-RAY DIFFRACTION / Resolution: 1.1 Å

PDB-2x4l:
Crystal structure of DesE, a ferric-siderophore receptor protein from Streptomyces coelicolor
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-2x5c:
Crystal structure of hypothetical protein ORF131 from Pyrobaculum Spherical Virus
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-2x5d:
Crystal Structure of a probable aminotransferase from Pseudomonas aeruginosa
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-2x5f:
Crystal structure of the methicillin-resistant Staphylococcus aureus Sar2028, an aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate dependent aminotransferase
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-2x5g:
Crystal structure of the ORF131L51M mutant from Sulfolobus islandicus rudivirus 1
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-2x5h:
Crystal structure of the ORF131 L26M L51M double mutant from Sulfolobus islandicus rudivirus 1
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-2x5p:
Crystal structure of the Streptococcus pyogenes fibronectin binding protein Fbab-B
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-2x5q:
Crystal Structure of Hypothetical protein sso1986 from Sulfolobus solfataricus P2
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-2x5r:
Crystal Structure of the hypothetical protein ORF126 from Pyrobaculum spherical virus
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-2x5t:
Crystal structure of ORF131 from Sulfolobus islandicus rudivirus 1
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2x7b:
Crystal structure of the N-terminal acetylase Ard1 from Sulfolobus solfataricus P2
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-2x7i:
Crystal structure of mevalonate kinase from methicillin-resistant Staphylococcus aureus MRSA252
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2xu2:
Crystal Structure of the hypothetical protein PA4511 from Pseudomonas aeruginosa
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-ZN:
Unknown entry

ChemComp-FE2:
Unknown entry

ChemComp-CAC:
CACODYLATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-CL:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-BME:
BETA-MERCAPTOETHANOL

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-SO4:
SULFATE ION

ChemComp-APC:
DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER / AMP-CPP, energy-carrying molecule analogue*YM

ChemComp-PLP:
PYRIDOXAL-5'-PHOSPHATE

ChemComp-SM:
SAMARIUM (III) ION

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-PO4:
PHOSPHATE ION

ChemComp-ACT:
ACETATE ION

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-MG:
Unknown entry

ChemComp-MLI:
MALONATE ION

ChemComp-COA:
COENZYME A

ChemComp-CIT:
CITRIC ACID

Source
  • sulfolobus solfataricus (archaea)
  • staphylococcus aureus (bacteria)
  • pseudomonas aeruginosa pao1 (bacteria)
  • pyrobaculum spherical virus
  • escherichia coli cft073 (bacteria)
  • bordetella bronchiseptica (bacteria)
  • pseudomonas aeruginosa (bacteria)
  • staphylococcus aureus subsp. aureus (bacteria)
  • sulfolobus islandicus rudivirus 1 variant xx
  • sulfolobus islandicus rod-shaped virus 1
  • streptomyces coelicolor (bacteria)
  • sulfolobus islandicus rudivirus 1
  • streptococcus pyogenes (bacteria)
KeywordsUNKNOWN FUNCTION / STRUCTURAL GENOMICS / CAS / RNAI / CRISPR / TRANSFERASE / KINASE / 1-PHOSPHOFRUCTOKINASE / HYDROLASE / GLYCOSIDASE / 3-METHYLADENINE-DNA-GLYCOSYLASE-I / SIGNALING PROTEIN / QUINOLONE SIGNAL RESPONSE PROTEIN / SSPF / VIRAL PROTEIN / ORF165A / HYDROLASE INHIBITOR / ANTIRESTRICTION / BIOSYNTHETIC PROTEIN / ALCALIGIN BIOSYNTHESIS / ADENYLATION / SIDEROPHORES / IRON ACQUISITION / HED / ACYLTRANSFERASE / LIPID SYNTHESIS / MULTIFUNCTIONAL ENZYME / FATTY ACID BIOSYNTHESIS / LIGASE / ATP-BINDING / NUCLEOTIDE-BINDING / PANTOTHENATE BIOSYNTHESIS / HOST MEMBRANE / LYASE / OXIDOREDUCTASE / MONOOXYGENASE / ARCHEAL VIRUS / ISOMERASE / TRANSCRIPTION / DUF1874 / TRANSPORT / PROTEIN BINDING / DOMAIN-SWAP

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