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TitleExperimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Journal, issue, pagesBiochemistry, Vol. 54, Page 909-931, Year 2015
Publish dateJul 11, 2013 (structure data deposition date)
AuthorsVetting, M.W. / Al-Obaidi, N. / Zhao, S. / San Francisco, B. / Kim, J. / Wichelecki, D.J. / Bouvier, J.T. / Solbiati, J.O. / Vu, H. / Zhang, X. ...Vetting, M.W. / Al-Obaidi, N. / Zhao, S. / San Francisco, B. / Kim, J. / Wichelecki, D.J. / Bouvier, J.T. / Solbiati, J.O. / Vu, H. / Zhang, X. / Rodionov, D.A. / Love, J.D. / Hillerich, B.S. / Seidel, R.D. / Quinn, R.J. / Osterman, A.L. / Cronan, J.E. / Jacobson, M.P. / Gerlt, J.A. / Almo, S.C.
External linksBiochemistry / PubMed:25540822
MethodsX-ray diffraction
Resolution1.05 - 2.7 Å
Structure data

PDB-4ln5:
Crystal structure of a trap periplasmic solute binding protein from burkholderia ambifaria (Bamb_6123), TARGET EFI-510059, with bound glycerol and chloride ion
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4mco:
Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), target EFI-510211, with bound malonate
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4mev:
Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), Target EFI-510211, with bound malonate, space group I422
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4mhf:
Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_3107), target EFI-510173, with bound alpha/beta D-Glucuronate, space group P21
Method: X-RAY DIFFRACTION / Resolution: 1.46 Å

PDB-4mij:
Crystal structure of a Trap periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_3107), target EFI-510173, with bound alpha/beta D-Galacturonate, space group P21
Method: X-RAY DIFFRACTION / Resolution: 1.1 Å

PDB-4mnc:
Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_4736), Target EFI-510156, with bound benzoyl formate, space group P21
Method: X-RAY DIFFRACTION / Resolution: 1.05 Å

PDB-4mni:
Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_4736), Target EFI-510156, with bound benzoyl formate, space group P6522
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4mx6:
Crystal structure of a trap periplasmic solute binding protein from shewanella oneidensis (SO_3134), target EFI-510275, with bound succinate
Method: X-RAY DIFFRACTION / Resolution: 1.1 Å

PDB-4n15:
Crystal structure of a TRAP periplasmic solute binding protein from Burkholderia ambifaria (BAM_6123), Target EFI-510059, with bound beta-D-glucuronate
Method: X-RAY DIFFRACTION / Resolution: 1.651 Å

PDB-4n17:
Crystal structure of a TRAP periplasmic solute binding protein from Burkholderia ambifaria (BAM_6123), Target EFI-510059, With bound beta-D-galacturonate
Method: X-RAY DIFFRACTION / Resolution: 1.501 Å

PDB-4n4u:
Crystal structure of ABC transporter solute binding protein BB0719 from Bordetella bronchiseptica RB50, TARGET EFI-510049
Method: X-RAY DIFFRACTION / Resolution: 1.57 Å

PDB-4n6d:
Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638 (Desal_3247), Target EFI-510112, phased with I3C, open complex, C-terminus of symmetry mate bound in ligand binding site
Method: X-RAY DIFFRACTION / Resolution: 1.701 Å

PDB-4n6k:
Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638, Target EFI-510113 (Desal_0342), complex with diglycerolphosphate
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-4n8g:
Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0660), Target EFI-501075, with bound D-alanine-D-alanine
Method: X-RAY DIFFRACTION / Resolution: 1.502 Å

PDB-4n8y:
Crystal structure of a trap periplasmic solute binding protein from bradyrhizobium sp. btai1 b (bbta_0128), target EFI-510056 (bbta_0128), complex with alpha/beta-d-galacturonate
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4n91:
Crystal structure of a trap periplasmic solute binding protein from anaerococcus prevotii dsm 20548 (Apre_1383), target EFI-510023, with bound alpha/beta d-glucuronate
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4nap:
Crystal structure of a trap periplasmic solute binding protein from Desulfovibrio alaskensis G20 (DDE_0634), target EFI-510102, with bound d-tryptophan
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4nf0:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM PSEUDOMONAS AERUGINOSA PAO1 (PA4616), TARGET EFI-510182, WITH BOUND L-Malate
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-4ng7:
Crystal structure of a TRAP periplasmic solute binding protein from Citrobacter koseri (CKO_04899), Target EFI-510094, apo, open structure
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4ngu:
Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio alaskensis G20 (Dde_1548), Target EFI-510103, with bound D-Ala-D-Ala
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-4nhb:
Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio desulfuricans (Ddes_1525), Target EFI-510107, with bound sn-glycerol-3-phosphate
Method: X-RAY DIFFRACTION / Resolution: 1.902 Å

PDB-4nn3:
Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens (Desal_2161), Target EFI-510109, with bound orotic acid
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-4nq8:
Crystal structure of a trap periplasmic solute binding protein from Bordetella bronchispeptica (bb3421), target EFI-510039, with density modeled as pantoate
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4nx1:
Crystal structure of a trap periplasmic solute binding protein from Sulfitobacter sp. nas-14.1, target EFI-510292, with bound alpha-D-taluronate
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4o7m:
Crystal structure of a trap periplasmic solute binding protein from shewanella loihica PV-4, target EFI-510273, with bound L-malate
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4o8m:
Crystal structure of a trap periplasmic solute binding protein actinobacillus succinogenes 130z, target EFI-510004, with bound L-galactonate
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4o94:
Crystal structure of a trap periplasmic solute binding protein from Rhodopseudomonas palustris HaA2 (RPB_3329), Target EFI-510223, with bound succinate
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-4oa4:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SHEWANELLA LOIHICA PV-4 (Shew_1446), TARGET EFI-510273, WITH BOUND SUCCINATE
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4oan:
Crystal structure of a TRAP periplasmic solute binding protein from rhodopseudomonas palustris HaA2 (RPB_2686), TARGET EFI-510221, with density modeled as (S)-2-hydroxy-2-methyl-3-oxobutanoate ((S)-2-Acetolactate)
Method: X-RAY DIFFRACTION / Resolution: 1.35 Å

PDB-4ovp:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SULFITOBACTER sp. NAS-14.1, TARGET EFI-510292, WITH BOUND ALPHA-D-MANURONATE
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4ovq:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS, TARGET EFI-510230, WITH BOUND BETA-D-GLUCURONATE
Method: X-RAY DIFFRACTION / Resolution: 1.501 Å

PDB-4ovr:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM XANTHOBACTER AUTOTROPHICUS PY2, TARGET EFI-510329, WITH BOUND BETA-D-GALACTURONATE
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4ovs:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SULFUROSPIRILLUM DELEYIANUM DSM 6946 (Sdel_0447), TARGET EFI-510309, WITH BOUND SUCCINATE
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4ovt:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM OCHROBACTERIUM ANTHROPI (Oant_3902), TARGET EFI-510153, WITH BOUND L-FUCONATE
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4p1e:
Crystal structure of a trap periplasmic solute binding protein from escherichia fergusonii (efer_1530), target EFI-510119, apo open structure, phased with iodide
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4p1l:
Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4p3l:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CHROMOHALOBACTER SALEXIGENS DSM 3043 (Csal_2479), TARGET EFI-510085, WITH BOUND GLUCURONATE, SPG P6122
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4p47:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM OCHROBACTRUM ANTHROPI (Oant_4429), TARGET EFI-510151, C-TERMIUS BOUND IN LIGAND BINDING POCKET
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

PDB-4p56:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM BORDETELLA BRONCHISEPTICA, TARGET EFI-510038 (BB2442), WITH BOUND (R)-MANDELATE and (S)-MANDELATE
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4p8b:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RALSTONIA EUTROPHA H16 (H16_A1328), TARGET EFI-510189, WITH BOUND (S)-2-hydroxy-2-methyl-3-oxobutanoate ((S)-2-Acetolactate)
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

PDB-4p9k:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM VERMINEPHROBACTER EISENIAE EF01-2 (Veis_3954, TARGET EFI-510324) A NEPHRIDIAL SYMBIONT OF THE EARTHWORM EISENIA FOETIDA, BOUND TO D-ERYTHRONATE WITH RESIDUAL DENSITY SUGGESTIVE OF SUPERPOSITION WITH COPURIFIED ALTERNATIVE LIGAND.
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-4paf:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND 3,4-DIHYDROXYBENZOATE
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4pai:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND 3-HYDROXYBENZOATE
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-4pak:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM VERMINEPHROBACTER EISENIAE EF01-2 (Veis_3954, TARGET EFI-510324) A NEPHRIDIAL SYMBIONT OF THE EARTHWORM EISENIA FOETIDA, BOUND TO (R)-PANTOIC ACID
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-4pbh:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND BENZOIC ACID
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-4pbq:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM HAEMOPHILUS INFLUENZAE RdAW (HICG_00826, TARGET EFI-510123) WITH BOUND L-GULONATE
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4pc9:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSENBACTER DENITRIFICANS OCh 114 (RD1_1052, TARGET EFI-510238) WITH BOUND D-MANNONATE
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

PDB-4pcd:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS OCh 114 (RD1_1052, TARGET EFI-510238) WITH BOUND L-GALACTONATE
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4pdd:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM POLAROMONAS SP JS666 (Bpro_0088, TARGET EFI-510167) BOUND TO D-ERYTHRONATE
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4pdh:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM POLAROMONAS SP JS666 (Bpro_1871, TARGET EFI-510164) BOUND TO D-ERYTHRONATE
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4pe3:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RHODOBACTER SPHAEROIDES (Rsph17029_3620, TARGET EFI-510199), APO OPEN STRUCTURE
Method: X-RAY DIFFRACTION / Resolution: 1.35 Å

PDB-4pet:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM COLWELLIA PSYCHRERYTHRAEA (CPS_0129, TARGET EFI-510097) WITH BOUND CALCIUM AND PYRUVATE
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4pf6:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS (RD1_0742, TARGET EFI-510239) WITH BOUND 3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID (KDO)
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-4pf8:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SULFITOBACTER sp. NAS-14.1 (TARGET EFI-510299) WITH BOUND BETA-D-GALACTURONATE
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4pfb:
Crystal structure of a TRAP periplasmic solute binding protein from Fusobacterium nucleatun (FN1258, TARGET EFI-510120) with bound SN-glycerol-3-phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-4pfi:
Crystal structure of a tRAP periplasmic solute binding protein from marinobacter aquaeolei VT8 (Maqu_2829, TARGET EFI-510133), apo open structure
Method: X-RAY DIFFRACTION / Resolution: 2.3024 Å

PDB-4pfr:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RHODOBACTER SPHAEROIDES (Rsph17029_3541, TARGET EFI-510203), APO OPEN PARTIALLY DISORDERED
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-4pgn:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND INDOLE PYRUVATE
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4pgp:
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-4uab:
Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0678), Target EFI-501078, with bound ethanolamine
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

Chemicals

ChemComp-CL:
Unknown entry / Chloride

ChemComp-GOL:
GLYCEROL / Glycerol

ChemComp-HOH:
WATER / Water

ChemComp-MLI:
MALONATE ION / Malonic acid

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM / HEPES

ChemComp-CIT:
CITRIC ACID / Citric acid

ChemComp-BDP:
beta-D-glucopyranuronic acid / Glucuronic acid

ChemComp-GCU:
alpha-D-glucopyranuronic acid / Glucuronic acid

ChemComp-EDO:
1,2-ETHANEDIOL / Ethylene glycol

ChemComp-GTR:
beta-D-galactopyranuronic acid / D-Galacturonic acid

ChemComp-ADA:
alpha-D-galactopyranuronic acid / D-Galacturonic acid

ChemComp-173:
BENZOYL-FORMIC ACID / Phenylglyoxylic acid

ChemComp-SO4:
SULFATE ION / Sulfate

ChemComp-SIN:
SUCCINIC ACID / Succinic acid

ChemComp-MG:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-I3C:
5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid

ChemComp-X3X:
bis[(2S)-2,3-dihydroxypropyl] hydrogen phosphate

ChemComp-DAL:
D-ALANINE / Alanine

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM / Polyethylene glycol

ChemComp-DTR:
D-TRYPTOPHAN / Tryptophan

ChemComp-LMR:
(2S)-2-hydroxybutanedioic acid / Malic acid

ChemComp-IOD:
IODIDE ION / Iodide

ChemComp-G3P:
SN-GLYCEROL-3-PHOSPHATE / Glycerol 3-phosphate

ChemComp-PGE:
TRIETHYLENE GLYCOL / Polyethylene glycol

ChemComp-ORO:
OROTIC ACID / Orotic acid

ChemComp-PAF:
PANTOATE / Pantoic acid

ChemComp-X1X:
alpha-D-talopyranuronic acid

ChemComp-2Q2:
L-galactonic acid

ChemComp-X2X:
(2S)-2-hydroxy-2-methyl-3-oxobutanoic acid / Acetolactic acid

ChemComp-MAV:
alpha-D-mannopyranuronic acid / Mannuronic acid

ChemComp-LFC:
6-deoxy-L-galactonic acid

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER / Diethylene glycol

ChemComp-RMN:
(R)-MANDELIC ACID

ChemComp-SMN:
(S)-MANDELIC ACID

ChemComp-EAX:
(2R,3R)-2,3,4-trihydroxybutanoic acid

ChemComp-DHB:
3,4-DIHYDROXYBENZOIC ACID / Protocatechuic acid

ChemComp-3HB:
3-HYDROXYBENZOIC ACID / 3-Hydroxybenzoic acid

ChemComp-BEZ:
BENZOIC ACID / Benzoic acid

ChemComp-2UF:
L-gulonate

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM / MES (buffer)

ChemComp-CS2:
D-MANNONIC ACID

ChemComp-MLA:
MALONIC ACID / Malonic acid

ChemComp-FMT:
FORMIC ACID / Formic acid

ChemComp-IMD:
IMIDAZOLE / Imidazole

ChemComp-ACT:
ACETATE ION / Acetate

ChemComp-ZN:
Unknown entry

ChemComp-PYR:
PYRUVIC ACID / Pyruvic acid

ChemComp-KDO:
3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid

ChemComp-NA:
Unknown entry

ChemComp-MLT:
D-MALATE / Malic acid

ChemComp-3IO:
3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID

ChemComp-IAC:
1H-INDOL-3-YLACETIC ACID / hormone*YM / Indole-3-acetic acid

ChemComp-ETA:
ETHANOLAMINE / Ethanolamine

Source
  • burkholderia ambifaria (bacteria)
  • rhodoferax ferrireducens (bacteria)
  • polaromonas (bacteria)
  • polaromonas sp. (bacteria)
  • shewanella oneidensis (bacteria)
  • bordetella bronchiseptica (bacteria)
  • desulfovibrio salexigens (bacteria)
  • chromohalobacter salexigens (bacteria)
  • bradyrhizobium sp. (bacteria)
  • anaerococcus prevoti (bacteria)
  • desulfovibrio alaskensis (bacteria)
  • pseudomonas aeruginosa (bacteria)
  • citrobacter koseri (bacteria)
  • desulfovibrio desulfuricans subsp. desulfuricans (bacteria)
  • sulfitobacter sp. nas-14.1 (bacteria)
  • shewanella loihica (bacteria)
  • actinobacillus succinogenes (bacteria)
  • rhodopseudomonas palustris (phototrophic)
  • sulfitobacter sp. (bacteria)
  • roseobacter denitrificans (bacteria)
  • xanthobacter autotrophicus (bacteria)
  • sulfurospirillum deleyianum (bacteria)
  • ochrobactrum anthropi (bacteria)
  • escherichia fergusonii (bacteria)
  • cupriavidus necator (bacteria)
  • verminephrobacter eiseniae (bacteria)
  • ruegeria pomeroyi (bacteria)
  • haemophilus influenzae (bacteria)
  • polaromonas sp. js666 (bacteria)
  • rhodobacter sphaeroides (bacteria)
  • colwellia psychrerythraea (bacteria)
  • fusobacterium nucleatum subsp. nucleatum (bacteria)
  • marinobacter aquaeolei (bacteria)
  • desulfovibrio desulfuricans (bacteria)
KeywordsTRANSPORT PROTEIN / ENZYME FUNCTION INITIATIVE / EFI / Structural Genomics / TRAP periplasmic solute binding family / ABC PERIPLASMIC SOLUTE BINDING FAMILY / PROTEIN TRANSPORT / PROTEIN BINDING / MEMBRANE PROTEIN/PROTEIN TRANSPORT / MEMBRANE PROTEIN-PROTEIN TRANSPORT complex / SOLUTE-BINDING PROTEIN

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  • Database of articles cited by EMDB, PDB, and SASBDB entries
  • Using PubMed data

Related info.:EMDB / PDB / SASBDB / Yorodumi / EMN Papers / Changes in new EM Navigator and Yorodumi

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