[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 565 items for (author: zong & z)

EMDB-64791:
CryoEM structure of human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

PDB-9v5p:
Human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

EMDB-63943:
Substrate-free human 26S proteasome purified by midnolin, 20S proteasome, RPTs and RPN11 part
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-65595:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl bound
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-65839:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-68472:
Structure of human 26S proteasome complexed with midnolin(1-111+337-468)
Method: single particle / : Liang L, Zhu C, Qin L

PDB-22mm:
Structure of human 26S proteasome complexed with midnolin(1-111+337-468)
Method: single particle / : Liang L, Zhu C, Qin L

PDB-9u7r:
Substrate-free human 26S proteasome purified by midnolin, 20S proteasome, RPTs and RPN11 part
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9w39:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl bound
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9wbg:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63775:
Focused refinement of RPN1 and the C-terminal helix of midnolin in the substrate-engaged human 26S proteasome
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63776:
Substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63777:
Substrate-engaged human 26S proteasome bound to midnolin with RPT5 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63817:
Substrate-engaged human 26S proteasome bound to midnolin with RPT2 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63850:
Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT6 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9mbo:
Focused refinement of RPN1 and the C-terminal helix of midnolin in the substrate-engaged human 26S proteasome
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9mbp:
Substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9mbq:
Substrate-engaged human 26S proteasome bound to midnolin with RPT5 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9u3l:
Substrate-engaged human 26S proteasome bound to midnolin with RPT2 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9u4m:
Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT6 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63725:
Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63726:
Consensus map of substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63727:
Consensus map of substrate-engaged human 26S proteasome bound to midnolin with RPT5 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63728:
Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT5 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63751:
Consensus map of substrate-engaged human 26S proteasome bound to midnolin with RPT2 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63752:
Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT2 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-47768:
Cryo-EM structure of human TWIK-2 at pH 7.5
Method: single particle / : Ma Q, Kumar A, Navratna V, Mosalaganti S

PDB-9e94:
Cryo-EM structure of human TWIK-2 at pH 7.5
Method: single particle / : Ma Q, Kumar A, Navratna V, Mosalaganti S

EMDB-70622:
Hepatitis C virus sE1E2.Cut1+2.SPYdeltaN bound to antibodies AR4A and AR3C
Method: single particle / : Janus BM, Gonzalez FG, Ofek G

EMDB-70623:
Hepatitis C virus sE1E2.Cut1+2.SPYdeltaN bound to antibodies AR4A and HEPC74
Method: single particle / : Janus BM, Gonzalez FG, Ofek G

EMDB-67108:
Cryo-EM structure of Receptor of GPR75
Method: single particle / : Wu C, Yuan Q

EMDB-67109:
The cryo_EM structure of GPR75 complex
Method: single particle / : Wu C, Yuan Q

EMDB-67110:
A composite Cryo-EM structure of GPR75
Method: single particle / : Yuan Q, Wu C

EMDB-67119:
Cryo-EM structure of apo form of GPR75-bRIL-Fab complex
Method: single particle / : Wu C, Yuan Q

PDB-9xqc:
A composite Cryo-EM structure of GPR75
Method: single particle / : Yuan Q, Wu C

PDB-9xqn:
Cryo-EM structure of apo form of GPR75-bRIL-Fab complex
Method: single particle / : Wu C, Yuan Q

EMDB-63025:
AMO complex
Method: single particle / : Li ZQ, Yang XY

PDB-9leg:
AMO complex
Method: single particle / : Li ZQ, Yang XY

EMDB-73766:
Mitochondrial Creatine Kinase in complex with ADP, creatine, and uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

EMDB-73767:
Mitochondrial Creatine Kinase in complex with ADP and uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

PDB-9z2d:
Mitochondrial Creatine Kinase in complex with ADP, creatine, and uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

PDB-9z2f:
Mitochondrial Creatine Kinase in complex with ADP and uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

EMDB-65160:
Structure of human alpha-2/delta-1 with crisugabalin
Method: single particle / : Wang J, Chen Z, Gou X

PDB-9vlg:
Structure of human alpha-2/delta-1 with crisugabalin
Method: single particle / : Wang J, Chen Z, Gou X

EMDB-48519:
Vitamin K-dependent gamma-carboxylase with Osteocalcin (mutant) and vitamin K hydroquinone and calcium
Method: single particle / : Li W, Liu B, Cao Q

EMDB-48520:
Vitamin K-dependent gamma-carboxylase with Osteocalcin (mutant) and vitamin K hydroquinone
Method: single particle / : Li W, Liu B, Cao Q

EMDB-48522:
Vitamin K-dependent gamma-carboxylase with Osteocalcin and vitamin K hydroquinone
Method: single particle / : Li W, Liu B, Cao Q

PDB-9mqb:
Vitamin K-dependent gamma-carboxylase with Osteocalcin (mutant) and vitamin K hydroquinone and calcium
Method: single particle / : Li W, Liu B, Cao Q

PDB-9mqc:
Vitamin K-dependent gamma-carboxylase with Osteocalcin (mutant) and vitamin K hydroquinone
Method: single particle / : Li W, Liu B, Cao Q

PDB-9mqe:
Vitamin K-dependent gamma-carboxylase with Osteocalcin and vitamin K hydroquinone
Method: single particle / : Li W, Liu B, Cao Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more