[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,062 items for (author: you & z)


EMDB entry, No image

EMDB-38418:
A neutralizing nanobody VHH60 against wt SARS-CoV-2
Method: single particle / : Lu Y, Guo H, Ji X, Yang H

PDB-8xki:
A neutralizing nanobody VHH60 against wt SARS-CoV-2
Method: single particle / : Lu Y, Guo H, Ji X, Yang H


EMDB entry, No image

EMDB-60384:
Cryo-EM structure of the GPR15L(C11)-bound GPR15 complex
Method: single particle / : Zhang ZY, Zheng Y, Xu F

PDB-8zqe:
Cryo-EM structure of the GPR15L(C11)-bound GPR15 complex
Method: single particle / : Zhang ZY, Zheng Y, Xu F

EMDB-40971:
Atomic model of the mammalian mouse Mediator complex with CKM module
Method: single particle / : Zhao H, Asturias F

EMDB-16759:
Cryo-EM structure of retinal-free proteoopsin bound to decanoate
Method: single particle / : Hirschi S, Lemmin T, Fotiadis D

EMDB-16795:
Cryo-EM structure of pentameric proteorhodopsin A18L mutant
Method: single particle / : Hirschi S, Lemmin T, Fotiadis D

EMDB-16796:
Cryo-EM structure of hexameric proteorhodopsin A18L mutant
Method: single particle / : Hirschi S, Lemmin T, Fotiadis D

EMDB-37133:
Cryo-EM structure of an intermediate-state complex during the process of photosystem II repair
Method: single particle / : Li A, Wang Y, Liu Z

EMDB-37265:
Overall cryo-EM map of an intermediate-state complex during the process of photosystem II repair
Method: single particle / : Li A, Wang Y, Liu Z

EMDB-37288:
A focused cryo-EM map of an intermediate-state complex during the process of photosystem II repair (Part1)
Method: single particle / : Li A, Wang Y, Liu Z

EMDB-37289:
A focused cryo-EM map of an intermediate-state complex during the process of photosystem II repair (Part 2)
Method: single particle / : Li A, Wang Y, Liu Z

EMDB-60026:
Cryo-EM structure of an intermediate-state PSII-PRF2' complex during the process of photosystem II repair
Method: single particle / : Li A, Liu Z

PDB-8kde:
Cryo-EM structure of an intermediate-state complex during the process of photosystem II repair
Method: single particle / : Li A, Wang Y, Liu Z

PDB-8zee:
Cryo-EM structure of an intermediate-state PSII-PRF2' complex during the process of photosystem II repair
Method: single particle / : Li A, Liu Z

EMDB-37944:
Structure of 26RFa-pyroglutamylated RFamide peptide receptor complex
Method: single particle / : Jin S, Li X, Xu Y, Guo S, Wu C, Zhang H, Yuan Q, Xu HE, Xie X, Jiang Y

PDB-8wz2:
Structure of 26RFa-pyroglutamylated RFamide peptide receptor complex
Method: single particle / : Jin S, Li X, Xu Y, Guo S, Wu C, Zhang H, Yuan Q, Xu HE, Xie X, Jiang Y

EMDB-41569:
Cryo-EM structure of HmAb64 scFv in complex with CNE40 SOSIP trimer
Method: single particle / : Chan KW, Kong XP

PDB-8tr3:
Cryo-EM structure of HmAb64 scFv in complex with CNE40 SOSIP trimer
Method: single particle / : Chan KW, Kong XP

EMDB-37445:
Cryo-EM structure of human disease-associated P301L Tau amyloid fibril from mouse brain
Method: helical / : Liu KE, Zhao WB, Liu C, Li D

PDB-8wcp:
Cryo-EM structure of human disease-associated P301L Tau amyloid fibril from mouse brain
Method: helical / : Liu KE, Zhao WB, Liu C

EMDB-40968:
Atomic model of the mammalian Mediator complex with MED26 subunit
Method: single particle / : Zhao H, Asturias F

EMDB-40972:
CryoEM map of TR-TRAP
Method: single particle / : Zhao H, Asturias F

EMDB-38148:
Cryo-EM structure of the cortistatin 17-bound Somatostatin receptor 5-Gi protein complex
Method: single particle / : Xu HE, You C, Zhao L, Li J

PDB-8x8l:
Cryo-EM structure of the cortistatin 17-bound Somatostatin receptor 5-Gi protein complex
Method: single particle / : Xu HE, You C, Zhao L, Li J

EMDB-40975:
CryoEM map of mouse mediator complex with alternate conformation CKM module
Method: single particle / : Zhao H, Asturias F

EMDB-38150:
Cryo-EM structure of the octreotide-bound Somatostatin receptor 5-Gi protein complex
Method: single particle / : Xu HE, You C, Zhao L, Li J

PDB-8x8n:
Cryo-EM structure of the octreotide-bound Somatostatin receptor 5-Gi protein complex
Method: single particle / : Xu HE, You C, Zhao L, Li J

EMDB-37858:
SpCas9-MMLV RT-pegRNA-target DNA complex (termination)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-37859:
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-37860:
SpCas9-pegRNA-target DNA complex (pre-initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-37861:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-39253:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wus:
SpCas9-MMLV RT-pegRNA-target DNA complex (termination)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wut:
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wuu:
SpCas9-pegRNA-target DNA complex (pre-initiation)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8wuv:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

PDB-8ygj:
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt)
Method: single particle / : Shuto Y, Nakagawa R, Hoki M, Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-39582:
Cryo-EM structure of the amthamine-bound H2R-Gs complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

EMDB-39583:
Cryo-EM structure of the histamine-bound H3R-Gi complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

EMDB-39584:
Cryo-EM structure of the immepip-bound H3R-Gi complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

PDB-8yut:
Cryo-EM structure of the amthamine-bound H2R-Gs complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

PDB-8yuu:
Cryo-EM structure of the histamine-bound H3R-Gi complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

PDB-8yuv:
Cryo-EM structure of the immepip-bound H3R-Gi complex
Method: single particle / : Shen Q, Tang X, Wen X, Cheng S, Xiao P, Zang S, Shen D, Jiang L, Zheng Y, Zhang H, Xu H, Mao C, Zhang M, Hu W, Sun J, Chen Z, Zhang Y

EMDB-36987:
Structure of CUL3-RBX1-KLHL22 complex without CUL3 NA motif
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

PDB-8k9i:
Structure of CUL3-RBX1-KLHL22 complex without CUL3 NA motif
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

EMDB-36961:
Structure of CUL3-RBX1-KLHL22 complex
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

EMDB-39719:
Focused map of CUL3-RBX1-KLHL22 dimerization region
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

EMDB-39720:
Consensus map of CUL3-RBX1-KLHL22 complex
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

EMDB-39725:
Cryo-EM structure of CUL3-RBX1-KLHL22 complex --C1 Symmetry
Method: single particle / : Wang W, Ling L, Dai Z, Zuo P, Yin Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more