[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 101 items for (author: yang & zl)

EMDB-65055:
Cryo EM structure of hemagglutinin from Puerto Rico/8/1934 (H1N1) in complex with a single domain antibody
Method: single particle / : Yang ZL, Ying TL, Wu YL, Huang KK

EMDB-65056:
Cryo EM structure of hemagglutinin from Puerto Rico/8/1934-New York/55/2004 (H3N2) in complex with a single domain antibody
Method: single particle / : Yang ZL, Ying TL, Wu YL, Huang KK

EMDB-63848:
Cryo-EM structure of the hGPR4-apo Receptor in pH 7.8
Method: single particle / : Zhong YN, Liu ZL, Guo LL, Sun JP, Yang F

EMDB-65192:
Cryo-EM structure of the a-KG-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65193:
Cryo-EM structure of the ITA-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65194:
Cryo-EM structure of the A-1-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65222:
Cryo-EM structure of the OXGR1(CA)-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-62995:
Inactive TOD6 with AC DNA substrate
Method: single particle / : Mi L, Lv XC, Lu PL

EMDB-62996:
Inactivate TOD6 with TC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-62997:
Inactivate TOD6 with GC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-62998:
Inactivate TOD6 with CC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-62999:
Inactivate TOD4 with TC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-70808:
Structure of Fab HB420 in complex with influenza H3N2 A/Moscow/10/1999 neuraminidase
Method: single particle / : Lv H, Wu NC

PDB-9osr:
Structure of Fab HB420 in complex with influenza H3N2 A/Moscow/10/1999 neuraminidase
Method: single particle / : Lv H, Wu NC

EMDB-61517:
BtHKU5-CoV-2-441 Spike RBD domain binding to hACE2
Method: single particle / : Zhang W, Peng W, Chen HY

EMDB-45253:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46691:
Merbecovirus PnNL2018B Spike glycoprotein RBD bound to the P. Nathusii ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-60483:
Cryo-EM structure of P.nat ACE2 mutant in complex with MOW15-22 RBD
Method: single particle / : Tang J, Deng Z

EMDB-38183:
Identification, structure and agonist design of an androgen membrane receptor.
Method: single particle / : Ping YQ, Yang Z

EMDB-38184:
Identification, structure and agonist design of an androgen membrane receptor
Method: single particle / : Ping YQ, Yang Z

EMDB-38185:
Identification, structure and agonist design of an androgen membrane receptor
Method: single particle / : Ping YQ, Yang Z

EMDB-60917:
Identification, structure and agonist design of an androgen membrane receptor.
Method: single particle / : Ping YQ, Yang Z

EMDB-60918:
Identification, structure and agonist design of an androgen membrane receptor.
Method: single particle / : Ping YQ, Yang Z

EMDB-60391:
Cryo-EM structure of the N2-4N2C402 complex at a resolution of 1.9 angstrom
Method: single particle / : Chu BX, Wang X, Yang Q, Wu XD, Zhang ZL

EMDB-45174:
SARS-CoV-2 S + S2L20
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-45175:
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-28663:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and foscarnet (pre-translocation state)
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

EMDB-28664:
Herpes simplex virus 1 DNA polymerase holoenzyme bound to DNA template and primer, dNTP-free (editing mode)
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

EMDB-42887:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA in both open/closed conformations
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

EMDB-42888:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and DTTP in closed conformation
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

EMDB-42889:
Herpes simplex virus 1 polymerase holoenzyme bound to mismatched DNA in editing conformation
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

EMDB-42890:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and acyclovir triphosphate in closed conformation
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

EMDB-42891:
Herpes simplex virus 1 polymerase W781V mutant holoenzyme bound to DNA in editing conformation
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

PDB-8exx:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and foscarnet (pre-translocation state)
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

PDB-8v1q:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA in both open/closed conformations
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

PDB-8v1r:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and DTTP in closed conformation
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

PDB-8v1s:
Herpes simplex virus 1 polymerase holoenzyme bound to mismatched DNA in editing conformation
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

PDB-8v1t:
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and acyclovir triphosphate in closed conformation
Method: single particle / : Pan J, Abraham J, Coen DM, Shankar S, Yang P, Hogle J

EMDB-61053:
cryo-EM structure of human cystic fibrosis transmembrane conductance regulator (CFTR) from Biortus
Method: single particle / : Cao S, Shi H, Yang YH, Li JX, Hu YF

EMDB-29936:
CRYO-EM STRUCTURE OF IMPORTIN ALPHA1/BETA HETERODIMER
Method: single particle / : Ko Y, Cingolani G

PDB-8gcn:
CRYO-EM STRUCTURE OF IMPORTIN ALPHA1/BETA HETERODIMER
Method: single particle / : Ko Y, Cingolani G

EMDB-29858:
Hepatitis B virus capsid bound to importin alpha1
Method: single particle / : Yang R, Cingolani G

PDB-8g8y:
Hepatitis B virus capsid bound to importin alpha1
Method: single particle / : Yang R, Cingolani G

EMDB-29756:
Empty capsid of Hepatitis B virus
Method: single particle / : Yang R, Cingolani G

EMDB-29785:
Hepatitis B virus capsid bound to importin alpha1/beta heterodimer
Method: single particle / : Yang R, Cingolani G

PDB-8g5v:
Empty capsid of Hepatitis B virus
Method: single particle / : Yang R, Cingolani G

PDB-8g6v:
Hepatitis B virus capsid bound to importin alpha1/beta heterodimer
Method: single particle / : Yang R, Cingolani G

EMDB-29220:
CryoEM structure of HLA-A2 MAGEA4 (230-239) in complex with REGN6972 Fab and 2M2 Fab
Method: single particle / : Saotome K, Franklin MC

EMDB-29221:
CryoEM structure of HLA-A2 MAGEA4 (286-294) in complex with H2aM31345N Fab and 2M2 Fab
Method: single particle / : Saotome K, Franklin MC

PDB-8fja:
CryoEM structure of HLA-A2 MAGEA4 (230-239) in complex with REGN6972 Fab
Method: single particle / : Saotome K, Franklin MC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more