[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,084 items for (author: xin & y)

EMDB-71798:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) extended state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

EMDB-71799:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) docked state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

EMDB-71800:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) with enantiomer of 17-hydroxyprogesterone caproate
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

PDB-9pr5:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) extended state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

PDB-9pr6:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) docked state
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

PDB-9pr7:
Cryo-EM structure of the human inward-rectifier potassium 7.1 channel (Kir7.1) with enantiomer of 17-hydroxyprogesterone caproate
Method: single particle / : Niu Q, Vu S, Zhang R, Fu Z, Lishko PV

EMDB-72942:
Flagella filament structure in H. pylori composed of flagellin FlaA
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

EMDB-72948:
Structure of flagellin FlaB filament in H. pylori
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

PDB-9ygu:
Flagella filament structure in H. pylori composed of flagellin FlaA
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

PDB-9yh1:
Structure of flagellin FlaB filament in H. pylori
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

EMDB-70260:
Human MPC1-2 Complex
Method: single particle / : Qi X, Sun Y, Wang Y

EMDB-64142:
Cryo-EM structure of the HBsAg dimer and Complex with Fab
Method: single particle / : Liu Y, Liao M, Liu Z, Ju B, Zhang Z

PDB-9ugo:
Cryo-EM structure of the HBsAg dimer and Complex with Fab
Method: single particle / : Liu Y, Liao M, Liu Z, Ju B, Zhang Z

EMDB-56238:
In situ cryo-ET subtomogram averaged map of Flotillin complex
Method: subtomogram averaging / : Li D, Lizarrondo J, Wilfling F

EMDB-56295:
In situ cryo-ET tomogram of a lysosomal structure in untreated HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56296:
In situ cryo-ET tomogram of lysosome damaged by LLOMe (0.5mM, 60min) in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56297:
In situ cryo-ET of lysosome damaged by LLOMe (0.5mM, 60min) encapsulated in an autophagosome in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56298:
In situ cryo-ET tomogram of lysosomes in BAPTA AM pre-treated (50uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56300:
In situ cryo-ET tomogram of lysosomes in LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56327:
In situ cryo-ET tomogram of lysosomal structure in untreated rat hippocampal neurons
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-56329:
In situ cryo-ET tomogram of lysosomes in E64d pre-treated (20uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56330:
In situ cryo-ET tomogram of lysosomal structure in LLOMe-treated (0.5mM, 1h) rat hippocampal neuron.
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-62027:
Cryo-EM structure of E coli pstSCAB in the catalytic intermediate state
Method: single particle / : Chen QF, Xiao H

EMDB-62031:
Cryo-EM structure of E coli pstSCAB in the pretranslocation state
Method: single particle / : Chen QF, Xiao H

EMDB-62032:
Cryo-EM structure of E coli pstSCAB in the resting state
Method: single particle / : Chen QF, Xiao H

PDB-9k3s:
Cryo-EM structure of E coli pstSCAB in the catalytic intermediate state
Method: single particle / : Chen QF, Xiao H

PDB-9k3x:
Cryo-EM structure of E coli pstSCAB in the pretranslocation state
Method: single particle / : Chen QF, Xiao H

PDB-9k3y:
Cryo-EM structure of E coli pstSCAB in the resting state
Method: single particle / : Chen QF, Xiao H

EMDB-62662:
Cryo-EM structure of the LH1 complex from Roseiflexus castenholzii
Method: single particle / : Wang L, Yu LJ

EMDB-62663:
Cryo-EM structure of the RC complex from Rhodospirillum rubrum
Method: single particle / : Wang L, Yu LJ

PDB-9kzg:
Cryo-EM structure of the LH1 complex from Roseiflexus castenholzii
Method: single particle / : Wang L, Yu LJ

PDB-9kzh:
Cryo-EM structure of the RC complex from Rhodospirillum rubrum
Method: single particle / : Wang L, Yu LJ

EMDB-70785:
Bacteriophage Ur-lambda TypeIIa infection complex
Method: subtomogram averaging / : Yu H, Liu J, Molineux IJ

EMDB-70786:
Bacteriophage Ur-lambda TypeIIb infection complex
Method: subtomogram averaging / : Yu H, Liu J, Molineux IJ

EMDB-64929:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:2:2
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

EMDB-64933:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:4:4
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

PDB-9vbo:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:2:2
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

PDB-9vbt:
Cryo-EM structure of the multi-component acyltransferase complex MucABC from Streptococcus macacae at a stoichiometric ratio of 4:4:4
Method: single particle / : Luo Z, Shen Z, Liao G, Tang X, Pan X

EMDB-49520:
Focused refinement of the prefusion F glycoprotein ectodomain of Nipah virus in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-64674:
Cryo-EM structure of Gq-coupled PrRPR in complex with GUB08248
Method: single particle / : Zhao L, Li X, Li S, Yuan Q, Xu HE

EMDB-64693:
Cryo-EM structure of Gi-coupled NPFF2R in complex with GUB08248
Method: single particle / : Zhao L, Li X, Li S, Yuan Q

PDB-9v0x:
Cryo-EM structure of Gq-coupled PrRPR in complex with GUB08248
Method: single particle / : Zhao L, Li X, Li S, Yuan Q, Xu HE

PDB-9v1h:
Cryo-EM structure of Gi-coupled NPFF2R in complex with GUB08248
Method: single particle / : Zhao L, Li X, Li S, Yuan Q

EMDB-71539:
In situ cryoEM structure of bacteriophage P22 portal barrel
Method: single particle / : Yu H, Molineux IJ, Liu J

EMDB-71631:
Cryo-EM structure of bacteriophage P22 gp1-gp5-gp4 complex at 2.76 angstrom
Method: single particle / : Yu H, Liu J, Molienux IJ

PDB-9pdp:
In situ cryoEM structure of bacteriophage P22 portal barrel
Method: single particle / : Yu H, Molineux IJ, Liu J

PDB-9pgg:
Cryo-EM structure of bacteriophage P22 gp1-gp5-gp4 complex at 2.76 angstrom
Method: single particle / : Yu H, Liu J, Molienux IJ

EMDB-64556:
Cryo-EM structure of human V1aR bound with balovaptan at a resolution of 3.0 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-64559:
Cryo-EM structure of human V1aR bound with SRX246 at a resolution of 2.6 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

EMDB-66695:
Cryo-EM structure of human V1aR in apo state at a resolution of 2.8 angstrom
Method: single particle / : Wu XW, Zhong PY, Chu BX

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more