[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 155 items for (author: wright & im)

EMDB-59026:
Cryo-EM structure of SKM-M.smegmatis 70S ribosomal complex
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

PDB-32nj:
Cryo-EM structure of SKM-M.smegmatis 70S ribosomal complex
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

EMDB-53943:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-54009:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rfw:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rja:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-53311:
Cryo-EM map of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-53341:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-55145:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

PDB-9qqq:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

PDB-9qsj:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

PDB-9sro:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-71636:
Cryo-EM structure of brain-derived Tau fibril from Alzheimers disease patient tissue
Method: helical / : Pierson JA, Sanchez JC, Kraemer BC, Wright ER, Latimer SC

PDB-9pgo:
Cryo-EM structure of brain-derived Tau fibril from Alzheimers disease patient tissue
Method: helical / : Pierson JA, Sanchez JC, Kraemer BC, Wright ER, Latimer SC

EMDB-49656:
Rabbit RB142 polyclonal Fab in complex with HIV-1 1086C NFL Env trimer
Method: single particle / : Lin RN, Torres JL, Ozorowski G, Ward AB

EMDB-52431:
CryoEM structure of cyclised H-pilus
Method: helical / : Ishimoto N, Beis K

PDB-9hvc:
CryoEM structure of cyclised H-pilus
Method: helical / : Ishimoto N, Beis K

EMDB-48478:
Cryo-EM of F-pilus
Method: helical / : Sonani RR, Francetic O, Lejeune M, Izadi-Pruneyre N, Egelman EH

PDB-9moq:
Cryo-EM of F-pilus
Method: helical / : Sonani RR, Francetic O, Lejeune M, Izadi-Pruneyre N, Egelman EH

EMDB-44590:
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA with 1 nucleotide bulge
Method: single particle / : Wright ZM, Butay KJ, Krahn JM, Borgnia MJ, Stanley RE

EMDB-39596:
cryo-EM structure of carboxysomal midi-shell:icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 19)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

EMDB-39597:
cryo-EM structure of carboxysomal midi-shell: icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 16)
Method: single particle / : Wang P, Li JX, LI TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

EMDB-39598:
cryo-EM structure of carboxysomal midi-shell: icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 9)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

EMDB-39599:
cryo-EM structure of carboxysomal midi-shell: assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T=9 Q=12)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

EMDB-39601:
cryo-EM structure of carboxysomal midi-shell: icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 13)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

EMDB-50109:
cryo-EM structure of carboxysomal mini-shell icosahedral assembly from co-expression of CsoS1C, CsoS4A, and CsoS2-C (T = 9)
Method: single particle / : Ng PC, Li T, Basle A, Marles-Wright J, Liu LN

PDB-8yvc:
Cryo-EM structure of carboxysomal midi-shell:icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 19)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

PDB-8yvd:
Cryo-EM structure of carboxysomal midi-shell: icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 16)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ

PDB-8yve:
cryo-EM structure of carboxysomal midi-shell: icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 9)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

PDB-8yvf:
cryo-EM structure of carboxysomal midi-shell: assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T=9 Q=12)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

PDB-8yvi:
Cryo-EM structure of carboxysomal midi-shell: icosahedral assembly from CsoS4A/4B/1A/1B/1C/1D and CsoS2 C-terminal co-expression (T = 13)
Method: single particle / : Wang P, Li JX, Li TP, Li K, Ng PC, Wang SM, Chriscoli V, Basle A, Marles-Wright J, Zhang YZ, Liu LN

PDB-9f0h:
cryo-EM structure of carboxysomal mini-shell icosahedral assembly from co-expression of CsoS1C, CsoS4A, and CsoS2-C (T = 9)
Method: single particle / : Wang P, Marles-Wright J, Liu LN

EMDB-44965:
Sub-tomogram average of the RSV M lattice from native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44966:
Sub-tomogram average of a pair of RSV F trimers from native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44968:
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44969:
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-44971:
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Method: subtomogram averaging / : Sibert BS, Wright ER

EMDB-41730:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Ribavirin
Method: single particle / : Wright NJ, Lee SY

EMDB-41731:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in MSP2N2 nanodiscs, apo state
Method: single particle / : Wright NJ, Lee SY

EMDB-41732:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with GS-441524, consensus reconstruction
Method: single particle / : Wright NJ, Lee SY

EMDB-41733:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with GS-441524, subset reconstruction
Method: single particle / : Wright NJ, Lee SY

EMDB-41734:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with N-hydroxycytidine
Method: single particle / : Wright NJ, Lee SY

EMDB-41735:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with PSI-6206
Method: single particle / : Wright NJ, Lee SY

EMDB-41736:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, INT1-INT1-INT1 conformation
Method: single particle / : Wright NJ, Lee SY

EMDB-41737:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, INT1-INT1-INT3 conformation
Method: single particle / : Wright NJ, Lee SY

EMDB-41738:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 2, INT2-INT2-INT2 conformation
Method: single particle / : Wright NJ, Lee SY

EMDB-41739:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 2, INT2-INT1-INT1 conformation
Method: single particle / : Wright NJ, Lee SY

EMDB-41740:
Cryo-EM reconstruction of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, consensus reconstruction
Method: single particle / : Wright NJ, Lee SY

EMDB-41741:
Cryo-EM reconstruction of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, OFS-OFS-OFS conformation
Method: single particle / : Wright NJ, Lee SY

EMDB-41742:
Cryo-EM reconstruction of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, OFS-OFS-INT1 conformation
Method: single particle / : Wright NJ, Lee SY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more