[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,437 items for (author: williams & e)

EMDB-77690:
Antibody 44715-B.01 bound to HIV Env 25710 SOSIP trimer
Method: single particle / : Edwards RJ, Hogarty MP

EMDB-77691:
Antibody 44645-A.01 bound to HIV Env 25710 SOSIP trimer
Method: single particle / : Edwards RJ, Hogarty MP

EMDB-77692:
Antibody BV57-A.01 bound to HIV Env CH848.3.D0949.10.17chim.6R.DS.SOSIP.664_N133D_N138T
Method: single particle / : Edwards RJ, Hogarty MP

EMDB-68793:
Vpb4Aa2 pore complex in C1 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

EMDB-71647:
Vpb4Aa2 pore complex in C7 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

PDB-22zo:
Single full-length subunit of the Vpb4Aa2 pore complex
Method: single particle / : Wirawan R, Lupton CJ, Venugopal H, Berry C, Dunstone MA, Spicer BA

PDB-9phf:
Vpb4Aa2 pore complex in C7 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

EMDB-72260:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.047, RP.057 and RP.035
Method: single particle / : Barrett JR, Ward AB

EMDB-72265:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.093, RP.073 and RP.063
Method: single particle / : Barrett JR, Ward AB

EMDB-72294:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.092 and RP.052
Method: single particle / : Barrett JR, Ward AB

PDB-9q69:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.047, RP.057 and RP.035
Method: single particle / : Barrett JR, Ward AB

PDB-9q6b:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.093, RP.073 and RP.063
Method: single particle / : Barrett JR, Ward AB

PDB-9q7c:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.092 and RP.052
Method: single particle / : Barrett JR, Ward AB

EMDB-57888:
HIV-1 CA hexamer (MX2 bound)
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57889:
Unbound HIV-1 CA hexamer
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57890:
HIV-1 capsid tri-hexamer bound to MX2
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57891:
HIV-1 CA tri-hexamer interface
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30od:
HIV-1 CA hexamer (MX2 bound)
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30oe:
Unbound HIV-1 CA hexamer
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30of:
HIV-1 capsid tri-hexamer bound to MX2
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30og:
HIV-1 CA tri-hexamer interface
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-73963:
cryoEM structure of COMMD-like protein S4Y171 octamer
Method: single particle / : Healy MD, Collins BM, Liu M, Cater RJ, Blades F

EMDB-73964:
cryoEM structure of COMMD-like protein S4Y171 octamer
Method: single particle / : Healy MD, Collins BM, Liu M, Cater RJ, Blades F

PDB-9za1:
cryoEM structure of COMMD-like protein S4Y171 octamer
Method: single particle / : Healy MD, Collins BM, Liu M, Cater RJ, Blades F

PDB-9za2:
cryoEM structure of COMMD-like protein S4Y171 octamer
Method: single particle / : Healy MD, Collins BM, Liu M, Cater RJ, Blades F

EMDB-58181:
Cryo-EM map of influenza hemagglutinin (A/Hong Kong/1/1968, H3N2) plunged control sample
Method: single particle / : Williams HM, Curtis WA, Haubner M, Wenz J, Drabbels M, Lorenz UJ

EMDB-58182:
Cryo-EM map of influenza hemagglutinin (A/Hong Kong/1/1968, H3N2) following ultrasonic excitation during plunging
Method: single particle / : Williams HM, Curtis WA, Haubner M, Wenz J, Drabbels M, Lorenz UJ

EMDB-54312:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L, focused refinement on the adaptor arm)
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54313:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L, focused refinement on the kinase arm)
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54314:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L), focused refinement on the base of the complex
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54315:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L, focused refinement on the interface between RAB5A and VPS34)
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54316:
VPS34-CII (VPS34 199-REIE-202 > 199-AAAA-202 mutant) bound to RAB5A-GTP (Q79L), consensus refinement
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54317:
VPS34-CII (VPS34 199-REIE-202 > 199-AAAA-202 mutant) bound to RAB5A-GTP (Q79L); unsharpened composite map
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54318:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, focused refinement on the kinase arm
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54319:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, focused refinement on the adaptor arm
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54320:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, focused refinement of the RAB5A interface with VPS15
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54321:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, consensus refinement
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54322:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit; unsharpened composite map
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54358:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L), primary composite map processed with CryoTEN
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

EMDB-54359:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, composite map processed with CryoTEN.
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

EMDB-54361:
Apo VPS34-CII (VPS34/VPS15/BECLIN1/UVRAG), consensus refinement map processed with CryoTEN
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

EMDB-54362:
VPS34-CII bound to RAB5A-GTP 1-212 (C19S, C63S, Q79L) on the VPS34 subunit, primary map processed with CryoTEN
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

EMDB-54363:
VPS34-CII bound to RAB5A-GTP 1-212 (C19S, C63S, Q79L) on the VPS15 subunit, primary map processed with CryoTEN
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

EMDB-54364:
VPS34-CII (VPS34/VPS15/BECLIN1/UVRAG) bound to RAB5A (Q79L) on the VPS34 and VPS15 subunits, primary map processed with CryoTEN
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

EMDB-54560:
Human complex II-BATS bound to membrane-attached Rab5a-GTP
Method: subtomogram averaging / : Dessus AN, Tremel S, Williams RL

PDB-9rx5:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L)
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

PDB-9rx6:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

PDB-9rx8:
Apo VPS34-CII (VPS34/VPS15/BECLIN1/UVRAG)
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

PDB-9rx9:
VPS34-CII bound to RAB5A-GTP 1-212 (C19S, C63S, Q79L) on the VPS34 subunit
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

PDB-9rxa:
VPS34-CII bound to RAB5A-GTP 1-212 (C19S, C63S, Q79L) on the VPS15 subunit
Method: single particle / : Spokaite S, Ohashi Y, Dessus AN, Bourguet M, Williams RL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more