[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 59 items for (author: weiner & l)

EMDB-70395:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9oed:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-70231:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9o8m:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-50840:
CryoEM structure of RV-A89
Method: single particle / : Wald J, Blaas D, Marlovits TC

EMDB-50844:
CryoEM structure of RV-A89
Method: single particle / : Wald J, Blaas D, Marlovits TC

PDB-9fx1:
CryoEM structure of RV-A89
Method: single particle / : Wald J, Goessweiner-Mohr N, Blaas D, Marlovits TC

PDB-9fx9:
CryoEM structure of RV-A89
Method: single particle / : Wald J, Goessweiner-Mohr N, Blaas D, Marlovits TC

EMDB-15905:
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Method: single particle / : Koller TO, Graf M, Wilson DN

PDB-8b7y:
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Method: single particle / : Koller TO, Graf M, Wilson DN

EMDB-14121:
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Method: single particle / : Koller TO, Beckert B, Wilson DN

PDB-7qq3:
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Method: single particle / : Koller TO, Beckert B, Wilson DN

EMDB-15085:
RuvAB branch migration motor complexed to the Holliday junction - composite map 1 and 2
Method: single particle / : Wald J, Marlovits TC

EMDB-27254:
SARS-CoV-2 Spike RBD in complex with DMAbs 2130 and 2196
Method: single particle / : Du J, Cui J, Pallesen J

EMDB-27255:
SARS-CoV-2 Spike RBD in complex with DMAb 2196
Method: single particle / : Du J, Cui J, Pallesen J

PDB-8d8q:
SARS-CoV-2 Spike RBD in complex with DMAbs 2130 and 2196
Method: single particle / : Du J, Cui J, Pallesen J

PDB-8d8r:
SARS-CoV-2 Spike RBD in complex with DMAb 2196
Method: single particle / : Du J, Cui J, Pallesen J

EMDB-13294:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13295:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13296:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s3 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13297:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13298:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s5 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13299:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13300:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0-A [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13301:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t1 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13302:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t1 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13303:
RuvAB branch migration motor complexed to the Holliday junction - RuvA-HJ core [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13304:
RuvAB branch migration motor complexed to the Holliday junction - RuvAB-HJ half [dataset t2]
Method: single particle / : Wald J, Marlovits TC

EMDB-13305:
RuvAB branch migration motor complexed to the Holliday junction - RuvAB-HJ pseudo half [dataset t2]
Method: single particle / : Wald J, Marlovits TC

EMDB-15126:
RuvAB branch migration motor complexed to the Holliday junction - full tripartite particle [dataset t2]
Method: single particle / : Wald J, Marlovits TC

PDB-7pbl:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset]
Method: single particle / : Fahrenkamp D, Goessweiner-Mohr N, Wald J, Marlovits TC

PDB-7pbm:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]
Method: single particle / : Fahrenkamp D, Goessweiner-Mohr N, Wald J, Marlovits TC

PDB-7pbn:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s3 [t2 dataset]
Method: single particle / : Fahrenkamp D, Goessweiner-Mohr N, Wald J, Marlovits TC

PDB-7pbo:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset]
Method: single particle / : Fahrenkamp D, Goessweiner-Mohr N, Wald J, Marlovits TC

PDB-7pbp:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s5 [t2 dataset]
Method: single particle / : Fahrenkamp D, Goessweiner-Mohr N, Wald J, Marlovits TC

PDB-7pbq:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t2 dataset]
Method: single particle / : Goessweiner-Mohr N, Fahrenkamp D, Wald J, Marlovits TC

PDB-7pbr:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0-A [t2 dataset]
Method: single particle / : Goessweiner-Mohr N, Fahrenkamp D, Wald J, Marlovits TC

PDB-7pbs:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t1 dataset]
Method: single particle / : Goessweiner-Mohr N, Fahrenkamp D, Wald J, Marlovits TC

PDB-7pbt:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t1 dataset]
Method: single particle / : Wald J, Fahrenkamp D, Goessweiner-Mohr N, Marlovits TC

PDB-7pbu:
RuvAB branch migration motor complexed to the Holliday junction - RuvA-HJ core [t2 dataset]
Method: single particle / : Goessweiner-Mohr N, Fahrenkamp D, Wald J, Marlovits TC

EMDB-25376:
BG505.MD39TS Env trimer in complex with Fab from antibody C05
Method: single particle / : Moore A, Du J

PDB-7sq1:
BG505.MD39TS Env trimer in complex with Fab from antibody C05
Method: single particle / : Moore A, Du J, Xu Z, Walker S, Kulp DW, Pallesen J

EMDB-11780:
Apo-state type 3 secretion system export apparatus complex from Salmonella enterica typhimurium
Method: single particle / : Marlovits T

EMDB-11781:
Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium - SpaR state 1
Method: single particle / : Marlovits T

PDB-7agx:
Apo-state type 3 secretion system export apparatus complex from Salmonella enterica typhimurium
Method: single particle / : Goessweiner-Mohr N, Fahrenkamp D, Miletic S, Wald J, Marlovits T

PDB-7ah9:
Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium - SpaR state 1
Method: single particle / : Fahrenkamp D, Goessweiner-Mohr N, Miletic S, Wald J, Marlovits T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more