[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 189 items for (author: takahashi & a)

EMDB-37910:
Structure of the SARS-CoV-2 BA.2.86 spike glycoprotein (closed state)

EMDB-38459:
Structure of the SARS-CoV-2 BA.2.86 spike protein (1-up state)

EMDB-38686:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (2-up state)

EMDB-38687:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (2-up and 1-down state)

EMDB-38688:
Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (up state)

EMDB-38689:
Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (down state)

EMDB-38690:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (3-up state)

EMDB-60886:
Structure of SARS-CoV-2 JN.1 spike RBD in complex with ACE2 (up state)

EMDB-60904:
Structure of SARS-CoV-2 JN.1 spike glycoprotein in complex with ACE2 (2-up state)

EMDB-60905:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (1 highly-open RBD and 1 partially-open RBD)

EMDB-60906:
Structure of SARS-CoV-2 JN.1 spike glycoprotein in complex with ACE2 (2-up and 1-down state)

PDB-8wxl:
Structure of the SARS-CoV-2 BA.2.86 spike glycoprotein (closed state)

PDB-8xux:
Structure of the SARS-CoV-2 BA.2.86 spike protein (1-up state)

PDB-8xuy:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (2-up state)

PDB-8xuz:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (2-up and 1-down state)

PDB-8xv0:
Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (up state)

PDB-8xv1:
Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (down state)

PDB-8xvm:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (3-up state)

PDB-9iu1:
Structure of SARS-CoV-2 JN.1 spike RBD in complex with ACE2 (up state)

EMDB-37501:
mouse TMEM63b in LMNG-CHS micelle

EMDB-37502:
mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab

PDB-8wg3:
mouse TMEM63b in LMNG-CHS micelle

PDB-8wg4:
mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab

EMDB-37571:
cryo-EM structure of alligator haemoglobin in carbonmonoxy form

EMDB-37572:
cryo-EM structure of alligator haemoglobin in oxy form

EMDB-37573:
cryo-EM structure of alligator haemoglobin in deoxy form

EMDB-37574:
cryo-EM structure of human haemoglobin in carbonmonoxy form

EMDB-37575:
cryo-EM structure of human haemoglobin in oxy form

EMDB-37576:
cryo-EM structure of human haemoglobin in deoxy form

PDB-8wix:
cryo-EM structure of alligator haemoglobin in carbonmonoxy form

PDB-8wiy:
cryo-EM structure of alligator haemoglobin in oxy form

PDB-8wiz:
cryo-EM structure of alligator haemoglobin in deoxy form

PDB-8wj0:
cryo-EM structure of human haemoglobin in carbonmonoxy form

PDB-8wj1:
cryo-EM structure of human haemoglobin in oxy form

PDB-8wj2:
cryo-EM structure of human haemoglobin in deoxy form

EMDB-44395:
Full-length cross-linked Contactin 2 (CNTN2)

EMDB-44396:
Cross-linked Contactin 2 Ig1-Ig6

EMDB-44397:
Full-length cross-linked Contactin 2 (FN1 apart)

PDB-9ba4:
Full-length cross-linked Contactin 2 (CNTN2)

PDB-9ba5:
Cross-linked Contactin 2 Ig1-Ig6

EMDB-44293:
Cryo-EM structure of MraY in complex with analogue 2

EMDB-44294:
Cryo-EM structure of MraY in complex with analogue 3

PDB-9b70:
Cryo-EM structure of MraY in complex with analogue 2

PDB-9b71:
Cryo-EM structure of MraY in complex with analogue 3

EMDB-36635:
Structure of arginine oxidase from Pseudomonas sp. TRU 7192

PDB-8jt7:
Structure of arginine oxidase from Pseudomonas sp. TRU 7192

EMDB-35411:
Dibekacin-bound E.coli 70S ribosome in the PURE system

EMDB-35412:
Arbekacin-bound E.coli 70S ribosome in the PURE system

EMDB-35413:
Dibekacin-added human 80S ribosome

EMDB-35414:
Arbekacin-added human 80S ribosome

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more