[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,875 items for (author: sy & a)

EMDB-49844:
Structure of Nanchung-Inactive-Calmodulin in apo state
Method: single particle / : Fedor JG, Lee SY

EMDB-49845:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide
Method: single particle / : Fedor JG, Lee SY

EMDB-49846:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide, EDTA
Method: single particle / : Fedor JG, Lee SY

EMDB-49847:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen and calcium
Method: single particle / : Fedor JG, Lee SY

EMDB-49848:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen, EDTA
Method: single particle / : Fedor JG, Lee SY

EMDB-49849:
Structure of a pentameric Nanchung in complex with Afidopyropen
Method: single particle / : Fedor JG, Lee SY

EMDB-72760:
Human uPAR bound to the Fab fragment of targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

EMDB-72761:
Mutant human uPAR bound to the Fab fragment of the targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

PDB-9yc5:
Human uPAR bound to the Fab fragment of targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

PDB-9yc6:
Mutant human uPAR bound to the Fab fragment of the targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

EMDB-52584:
Cryo-EM structure of retron Eco2 (Ec67) in presence of Mg ions
Method: single particle / : Skorupskaite A, Jasnauskaite M, Malinauskaite L, Pausch P

EMDB-52583:
Cryo-EM structure of retron Eco2 (Ec67)
Method: single particle / : Jasnauskaite M, Miksys A, Skorupskaite A, Malinauskaite L, Pausch P

PDB-9i2f:
Cryo-EM structure of retron Eco2 (Ec67)
Method: single particle / : Jasnauskaite M, Miksys A, Skorupskaite A, Malinauskaite L, Pausch P

EMDB-54033:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54034:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54035:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54036:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54037:
LolCDE complex with LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54038:
LolCDE complex with del 9-15 LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54039:
LolCDEdelta(235-252) complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54040:
LolCDE with bound ATPgammaS
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54041:
LolCDE(delta 235-252) complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54478:
LolCDE LolE R239C Y250C mutant closed conformation
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54479:
LolCDE LolE R239C Y250 mutant open conformation
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlc:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rld:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rle:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlf:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlg:
LolCDE complex with LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlh:
LolCDE complex with del 9-15 LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rli:
LolCDEdelta(235-252) complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlj:
LolCDE with bound ATPgammaS
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlk:
LolCDE(delta 235-252) complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-53065:
Respiratory supercomplex from Mycobacterium smegmatis with decylubiquinone
Method: single particle / : Kovalova T, Krol S, Brzezinski P, Hogbom M

PDB-9qef:
Respiratory supercomplex from Mycobacterium smegmatis with decylubiquinone
Method: single particle / : Kovalova T, Krol S, Brzezinski P, Hogbom M

EMDB-48353:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome activated elongation complex Composite map T
Method: single particle / : Syau D, Farnung L

EMDB-48354:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome activated elongation complex consensus map A
Method: single particle / : Syau D, Farnung L

EMDB-48355:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome IWS1+ELOF1 local map B
Method: single particle / : Syau D, Farnung L

EMDB-48356:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome IWS1 C-terminus local map C
Method: single particle / : Syau D, Farnung L

EMDB-48357:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome TFIIS local map D
Method: single particle / : Syau D, Farnung L

EMDB-48358:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome DSIF local map E
Method: single particle / : Syau D, Farnung L

EMDB-48359:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome RTF1 local map F
Method: single particle / : Syau D, Farnung L

EMDB-48360:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome 10-subunit Pol II local map G
Method: single particle / : Syau D, Farnung L

PDB-9mlc:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome activated elongation complex Composite map T
Method: single particle / : Syau D, Farnung L

EMDB-56129:
Octameric C. elegans BORC, containing BORCS5, BORCS6, BORCS7, BORCS8, KXD1 and the shared BORC and BLoC-1 subunits, BLOC1S1, BLOC1S2 and Snapin
Method: single particle / : Amann SJ, de Araujo MEG, Grishkovskaya I, Huber LA, Haselbach D

EMDB-48361:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome non-template DNA local map H
Method: single particle / : Syau D, Farnung L

EMDB-48363:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome RPB5 local map I
Method: single particle / : Syau D, Farnung L

EMDB-48364:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome CDC73 local map J
Method: single particle / : Syau D, Farnung L

EMDB-48365:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome CTR9+WDR61 local map K
Method: single particle / : Syau D, Farnung L

EMDB-48366:
Pol II-DSIF-SPT6-PAF1c-TFIIS-IWS1-ELOF1-LEDGF-nucleosome CTR9 TPR local map L
Method: single particle / : Syau D, Farnung L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more