[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 21 items for (author: sverzhinsky & a)

EMDB-48285:
Human PARP1 N-terminal domains bound to nicked DNA
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-9mi8:
Human PARP1 N-terminal domains bound to nicked DNA
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-48313:
PARP1 ART in complex with HPF1 and EB47
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-9mja:
PARP1 ART in complex with HPF1 and EB47
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-24618:
Archaeal DNA ligase and heterotrimeric PCNA in complex with non-ligatable DNA
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-24624:
Archaeal DNA ligase and heterotrimeric PCNA in complex with adenylated DNA
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-24625:
Archaeal DNA ligase and heterotrimeric PCNA in complex with end-joined DNA
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-7rpo:
Archaeal DNA ligase and heterotrimeric PCNA in complex with non-ligatable DNA
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-7rpw:
Archaeal DNA ligase and heterotrimeric PCNA in complex with adenylated DNA
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-7rpx:
Archaeal DNA ligase and heterotrimeric PCNA in complex with end-joined DNA
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-23299:
The negative stain EM structure of the DNA Ligase III catalytic core in complex with TDP1.
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-23301:
The negative stain EM structure of full-length DNA Ligase III in complex with TDP1
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-21958:
The negative stain EM structure of the human DNA LigI-PCNA-DNA complex
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-22130:
The negative stain EM structure of the human DNA LigIIIalpha-XRCC1 complex; conformer 1
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-22307:
The negative stain EM structure of the human DNA LigIIIalpha-XRCC1 complex; conformer 2
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-2859:
3D Reconstruction of Membrane Protein Complex ExbB4-ExbD1-TonB1
Method: single particle / : Sverzhinsky A, Chung JWC, Deme JC, Fabre L, Levey KT, Plesa M, Carter DM, Lypaczewski P, Coulton JW

EMDB-2934:
3D Reconstruction of Membrane Protein Complex ExbB4-ExbD1-TonB1
Method: single particle / : Sverzhinsky A, Chung JWC, Deme JC, Fabre L, Levey KT, Plesa M, Carter DM, Lypaczewski P, Coulton JW

EMDB-2935:
3D Reconstruction of Membrane Protein Complex ExbB4-ExbD1-TonB1
Method: single particle / : Sverzhinsky A, Chung JWC, Deme JC, Fabre L, Levey KT, Plesa M, Carter DM, Lypaczewski P, Coulton JW

EMDB-5901:
3D Reconstruction of Membrane Protein Complex ExbB4-ExbD2
Method: single particle / : Sverzhinsky A, Fabre L, Cottreau AL, Biot-Pelletier DMP, Khalil S, Bostina M, Rouiller I, Coulton JW

EMDB-5902:
3D Reconstruction of Membrane Protein Complex ExbB4-ExbD2
Method: single particle / : Sverzhinsky A, Fabre L, Cottreau AL, Biot-Pelletier DMP, Khalil S, Bostina M, Rouiller I, Coulton JW

EMDB-5903:
3D Reconstruction of Membrane Protein Complex ExbB4-ExbD2
Method: single particle / : Sverzhinsky A, Fabre L, Cottreau AL, Biot-Pelletier DMP, Khalil S, Bostina M, Rouiller I, Coulton JW

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more