[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,073 items for (author: song & g)

EMDB-60062:
cryo-EM structure of GPR4-Gs complex at pH 8.5

PDB-8zfj:
cryo-EM structure of GPR4-Gs complex at pH 8.5

EMDB-36914:
Cryo-EM structure of Streptomyces coelicolor transcription initiation complex with the global transcription factor AfsR

PDB-8k60:
Cryo-EM structure of Streptomyces coelicolor transcription initiation complex with the global transcription factor AfsR

EMDB-37499:
Cryo-EM structure of CRISPR-Csm effector complex from Mycobacterium canettii

PDB-8wfx:
Cryo-EM structure of CRISPR-Csm effector complex from Mycobacterium canettii

EMDB-19758:
Cryo-EM Structure of the R388 plasmid conjugative pilus reveals a helical polymer characterised by an unusual pilin/phospholipid binary complex

PDB-8s6h:
Cryo-EM Structure of the R388 plasmid conjugative pilus reveals a helical polymer characterised by an unusual pilin/phospholipid binary complex

EMDB-38532:
Cryo-EM structure of human ABCC4

PDB-8xok:
Cryo-EM structure of human ABCC4

EMDB-44411:
CryoEM structure of DIM2-HP1-H3K9me3-DNA complex

PDB-9baq:
CryoEM structure of DIM2-HP1-H3K9me3-DNA complex

EMDB-44415:
CryoEM structure of DIM2-HP1 complex

PDB-9baz:
CryoEM structure of DIM2-HP1 complex

EMDB-44410:
CryoEM structure of Apo-DIM2

PDB-9bap:
CryoEM structure of Apo-DIM2

EMDB-44635:
Inactive mu opioid receptor bound to Nb6, naloxone and NAM

PDB-9bjk:
Inactive mu opioid receptor bound to Nb6, naloxone and NAM

EMDB-38533:
Cryo-EM structure of human ABCC4 with ANP bound in NBD1

EMDB-38534:
Cryo-EM structure of human ABCC4 in complex with ANP-bound in NBD1 and METHOTREXATE

PDB-8xol:
Cryo-EM structure of human ABCC4 with ANP bound in NBD1

PDB-8xom:
Cryo-EM structure of human ABCC4 in complex with ANP-bound in NBD1 and METHOTREXATE

EMDB-38617:
SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab

EMDB-38618:
SARS-CoV-2 RBD + IMCAS-364 + hACE2

EMDB-38619:
SARS-CoV-2 RBD + IMCAS-364 (Local Refinement)

EMDB-38620:
SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2

EMDB-38621:
SARS-CoV-2 spike + IMCAS-123

EMDB-38823:
Cryo-EM structure of the 123-316 scDb/PT-RBD complex

PDB-8xse:
SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab

PDB-8xsf:
SARS-CoV-2 RBD + IMCAS-364 + hACE2

PDB-8xsi:
SARS-CoV-2 RBD + IMCAS-364 (Local Refinement)

PDB-8xsj:
SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2

PDB-8xsl:
SARS-CoV-2 spike + IMCAS-123

PDB-8y0y:
Cryo-EM structure of the 123-316 scDb/PT-RBD complex

EMDB-37593:
Vibrio vulnificus MARTX effector duet (RDTND-RID) complexed with human Rac1 Q61L and calmodulin

EMDB-38460:
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P), 1-RBD-up state

EMDB-38463:
Cryo-EM structure of SARS-CoV-2 Omicron EG.5 spike protein(6P), RBD-closed state

EMDB-38476:
Cryo-EM structure of SARS-CoV-2 Omicron HV.1 spike protein(6P), RBD-closed state

EMDB-38488:
Cryo-EM structure of SARS-CoV-2 Omicron EG.5.1 spike protein(6P), RBD-closed state

EMDB-38495:
SARS-CoV-2 Omicron EG.5.1 RBD in complex with human ACE2 (local refined from the spike protein)

EMDB-38496:
SARS-CoV-2 Omicron HV.1 RBD in complex with human ACE2 (local refinement from the spike protein)

EMDB-38498:
Cryo-EM structure of SARS-CoV-2 Omicron EG.5.1 spike protein(6P) in complex with human ACE2

EMDB-38502:
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P) in complex with human ACE2

EMDB-38505:
Cryo-EM structure of SARS-CoV-2 Omicron HV.1 spike protein(6P) in complex with human ACE2

EMDB-38826:
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein in complex with human ACE2

EMDB-38827:
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 RBD in complex with human ACE2 (local refinement from the spike protein)

EMDB-38937:
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein

EMDB-38983:
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 RBD in complex with human ACE2 and S309 Fab

PDB-8xlv:
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P), 1-RBD-up state

PDB-8xm5:
Cryo-EM structure of SARS-CoV-2 Omicron EG.5 spike protein(6P), RBD-closed state

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlc1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more