[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 36 items for (author: smirnova & e)

EMDB-52833:
Cryo-EM structure of alpha-synuclein fibrils formed in artificial cerebrospinal fluid (aCSF)
Method: helical / : Snieckute R, Sulskis D, Jocyte A, Venclovaite U, Tamulyte R, Ziaunys M, Smirnovas V, Sakalauskas A

PDB-9ic7:
Cryo-EM structure of alpha-synuclein fibrils formed in artificial cerebrospinal fluid (aCSF)
Method: helical / : Snieckute R, Sulskis D, Jocyte A, Venclovaite U, Tamulyte R, Ziaunys M, Smirnovas V, Sakalauskas A

EMDB-18581:
Human Tip60 complex
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18591:
Human Tip60 complex locally refined on RUVBL1/2
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18597:
Human Tip60 complex locally refined on ACTIN and the ATPase domain of EP400
Method: single particle / : Li C, Smirnova E, Schintzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18598:
Tip60 complex locally refined on ARP domain
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18611:
Cryo-EM structure of the human Tip60 complex
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18612:
Structure of TRRAP and EP400 in the human Tip 60 complex
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18613:
TRRAP in human Tip60 complex locally refined 1
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18618:
TRRAP in human Tip60 complex locally refined 2
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

EMDB-18619:
TRRAP and EP400 in the human Tip60 complex - composite map
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, SChultz P, Papai G, Ben-Shem A

EMDB-18794:
Human Tip60 complex with bound H2A.Z/H2B
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

PDB-8qr1:
Cryo-EM structure of the human Tip60 complex
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, Schultz P, Papai G, Ben-Shem A

PDB-8qri:
TRRAP and EP400 in the human Tip60 complex
Method: single particle / : Li C, Smirnova E, Schnitzler C, Crucifix C, Concordet JP, Brion A, Poterszman A, SChultz P, Papai G, Ben-Shem A

EMDB-18497:
Human Sirtuin 6 in complex with nucleosome - structure showing H2A tail path
Method: single particle / : Smirnova E, Bignon E, Schultz P, Papai G, Ben-Shem A

EMDB-15806:
Cryo-EM structure of the plant 80S ribosome
Method: single particle / : Smirnova J, Loerke J, Kleinau G, Schmidt A, Buerger J, Meyer EH, Mielke T, Scheerer P, Bock R, Spahn CMT, Zoschke R

PDB-8b2l:
Cryo-EM structure of the plant 80S ribosome
Method: single particle / : Smirnova J, Loerke J, Kleinau G, Schmidt A, Buerger J, Meyer EH, Mielke T, Scheerer P, Bock R, Spahn CMT, Zoschke R

EMDB-16842:
SIRT6 bound nucleosome
Method: single particle / : Smirnova E, Bignon E, Schultz P, Papai G, Ben-Shem A

EMDB-16843:
Nucleosome bound human SIRT6
Method: single particle / : Smirnova E, Bignon E, Schultz P, Papai G, Ben-Shem A

EMDB-16845:
Nucleosome Bound human SIRT6 (composite structure)
Method: single particle / : Smirnova E, Bignon E, Schultz P, Papai G, Ben-Shem A

EMDB-16861:
Sirt6 bound nucleosome - consensus map
Method: single particle / : Smirnova E, Bignon E, Schultz P, Papai G, Ben-Shem A

PDB-8of4:
Nucleosome Bound human SIRT6 (Composite)
Method: single particle / : Smirnova E, Bignon E, Schultz P, Papai G, Ben-Shem A

EMDB-15869:
NuA4 Histone Acetyltransferase Complex Epl1 full length
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

EMDB-15881:
NuA4 Histone Acetyltransferase Complex Full length Epl1 Core
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

EMDB-15896:
NuA4 Histone Acetyltransferase Complex Shortened Epl1 Loop 1 (SL1)
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

EMDB-15897:
NuA4 Histone Acetyltransferase Complex Epl1 Shortened Loop 1 (SL1) core
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

EMDB-15066:
NuA4 Histone Acetyltransferase complex - Upper lobe
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

EMDB-15067:
NuA4 Histone Acetyltransferase complex - Tra1 part 1
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

EMDB-15070:
NuA4 Histone Acetyltransferase complex - Tra1 Part 2
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

EMDB-15674:
Cryo-EM structure of the plant 40S subunit
Method: single particle / : Smirnova J, Loerke J, Kleinau G, Schmidt A, Buerger J, Meyer EH, Mielke T, Scheerer P, Bock R, Spahn CMT, Zoschke R

EMDB-15773:
Cryo-EM structure of the plant 60S subunit
Method: single particle / : Smirnova J, Loerke J, Kleinau G, Schmidt A, Buerger J, Meyer EH, Mielke T, Scheerer P, Bock R, Spahn CMT, Zoschke R

PDB-8auv:
Cryo-EM structure of the plant 40S subunit
Method: single particle / : Smirnova J, Loerke J, Kleinau G, Schmidt A, Buerger J, Meyer EH, Mielke T, Scheerer P, Bock R, Spahn CMT, Zoschke R

PDB-8azw:
Cryo-EM structure of the plant 60S subunit
Method: single particle / : Smirnova J, Loerke J, Kleinau G, Schmidt A, Buerger J, Meyer EH, Mielke T, Scheerer P, Bock R, Spahn CMT, Zoschke R

EMDB-14989:
NuA4 Histone Acetyltransferase Complex (Composite)
Method: single particle / : Schultz P, Ben-Shem A, Frechard A, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Ben-shem A

PDB-7zvw:
NuA4 Histone Acetyltransferase Complex
Method: single particle / : Schultz P, Ben-Shem A, Frechard A

EMDB-14980:
NuA4 Histone Acetyltransferase complex
Method: single particle / : Frechard A, Hexnerova R, Crucifix C, Papai G, Smirnova E, Faux C, Lo Ying Ping F, Helmlinger D, Schultz P, Ben-shem A

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more