[English] 日本語
Yorodumi
- EMDB-15806: Cryo-EM structure of the plant 80S ribosome -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: EMDB / ID: EMD-15806
TitleCryo-EM structure of the plant 80S ribosome
Map dataTobacco 80S ribosome from cytosol
Sample
  • Complex: 40S subunit of the cytosolic 80S ribosome from tobacco
    • Protein or peptide: x 76 types
    • RNA: x 6 types
  • Ligand: x 6 types
KeywordsPlant / 80S / rRNA Modifications / ribosome
Function / homology
Function and homology information


cellular response to abscisic acid stimulus / adaxial/abaxial pattern specification / leaf morphogenesis / positive regulation of signal transduction / seed germination / response to high light intensity / MAP kinase scaffold activity / response to UV-B / protein-RNA complex assembly / negative regulation of translational frameshifting ...cellular response to abscisic acid stimulus / adaxial/abaxial pattern specification / leaf morphogenesis / positive regulation of signal transduction / seed germination / response to high light intensity / MAP kinase scaffold activity / response to UV-B / protein-RNA complex assembly / negative regulation of translational frameshifting / endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / 90S preribosome / maturation of LSU-rRNA / endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / translation regulator activity / protein kinase C binding / rescue of stalled cytosolic ribosome / ribosomal large subunit biogenesis / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of SSU-rRNA / small-subunit processome / maintenance of translational fidelity / modification-dependent protein catabolic process / ribosome biogenesis / protein tag activity / rRNA processing / cytosolic ribosome / cell division / ribosomal small subunit assembly / ribosome binding / ribosomal small subunit biogenesis / small ribosomal subunit rRNA binding / 5S rRNA binding / ribosomal large subunit assembly / small ribosomal subunit / cytosolic small ribosomal subunit / large ribosomal subunit rRNA binding / cytosolic large ribosomal subunit / cytoplasmic translation / rRNA binding / negative regulation of translation / protein ubiquitination / ribonucleoprotein complex / structural constituent of ribosome / ribosome / translation / mRNA binding / nucleolus / metal ion binding / RNA binding / zinc ion binding / nucleus / cytosol
Similarity search - Function
Ribosomal protein L6, N-terminal / Ribosomal protein L6, N-terminal domain / Ribosomal protein L28e / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / Ribosomal protein L23 / Ribosomal protein L2, archaeal-type / metallochaperone-like domain / TRASH domain / : ...Ribosomal protein L6, N-terminal / Ribosomal protein L6, N-terminal domain / Ribosomal protein L28e / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / Ribosomal protein L23 / Ribosomal protein L2, archaeal-type / metallochaperone-like domain / TRASH domain / : / Ribosomal protein S26e signature. / Ribosomal protein L41 / Ribosomal protein L41 / Ribosomal protein S21e, conserved site / Ribosomal protein S21e signature. / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / : / Ribosomal protein S12e signature. / Ribosomal protein S12e / Ribosomal protein S26e / Ribosomal protein S26e superfamily / Ribosomal protein S26e / Ribosomal protein L29e / Ribosomal L29e protein family / Small (40S) ribosomal subunit Asc1/RACK1 / Ribosomal protein L22e / Ribosomal protein L22e superfamily / Ribosomal L22e protein family / Ribosomal protein L27e, conserved site / Ribosomal protein L27e signature. / Ribosomal protein L13e / Ribosomal protein L38e / Ribosomal protein L13e / Ribosomal L38e protein family / Ribosomal protein S21e / Ribosomal protein L38e superfamily / Ribosomal protein S21e superfamily / Ribosomal protein S21e / Ribosomal protein S19e, conserved site / Ribosomal protein S19e signature. / Ribosomal protein S5, eukaryotic/archaeal / Ribosomal protein S2, eukaryotic / Ribosomal protein L19, eukaryotic / 60S ribosomal protein L18a/ L20, eukaryotes / 40S Ribosomal protein S10 / Ribosomal protein L10e, conserved site / Ribosomal protein L10e signature. / S27a-like superfamily / Ribosomal protein L19/L19e conserved site / Ribosomal protein L19e signature. / Plectin/S10, N-terminal / Plectin/S10 domain / Ribosomal protein L44e signature. / Ribosomal protein L24e, conserved site / Ribosomal protein L24e signature. / Ribosomal protein L23/L25, N-terminal / Ribosomal protein L23, N-terminal domain / Ribosomal protein L10e / Ribosomal protein S30 / Ribosomal protein S30 / Ribosomal protein L5 eukaryotic, C-terminal / Ribosomal L18 C-terminal region / Ribosomal protein L34e, conserved site / Ribosomal protein L34e signature. / Ribosomal protein S10, eukaryotic/archaeal / Ribosomal protein S8e subdomain, eukaryotes / Ribosomal L40e family / Ribosomal protein S25 / S25 ribosomal protein / Ribosomal protein L36e signature. / 50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a / Ribosomal protein L30e signature 1. / Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A / Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A / Eukaryotic Ribosomal Protein L27, KOW domain / : / Ribosomal protein L27e / Ribosomal protein L27e superfamily / Ribosomal L27e protein family / Ribosomal Protein L6, KOW domain / Ribosomal protein S7e signature. / Ribosomal protein L35Ae, conserved site / Ribosomal protein L35Ae signature. / : / Ribosomal protein 60S L18 and 50S L18e / Ribosomal_L40e / Ribosomal protein L40e / Ribosomal protein S17e, conserved site / Ribosomal protein L40e superfamily / Ribosomal protein S17e signature. / Ribosomal protein L44e / Ribosomal protein L44 / : / Ribosomal protein S27a / Ribosomal protein S27a / Ribosomal protein S27a / Ribosomal protein S2, eukaryotic/archaeal / Ribosomal protein L7A/L8 / 60S ribosomal protein L35
Similarity search - Domain/homology
40S ribosomal protein S25 / 60S ribosomal protein L35-like / Large ribosomal subunit protein eL30 / Ubiquitin-ribosomal protein eL40 fusion protein / Ribosomal protein L19 / Large ribosomal subunit protein uL4 / Large ribosomal subunit protein eL43 / Small ribosomal subunit protein uS11y / 60S ribosomal protein L11-1 / Small ribosomal subunit protein uS5 ...40S ribosomal protein S25 / 60S ribosomal protein L35-like / Large ribosomal subunit protein eL30 / Ubiquitin-ribosomal protein eL40 fusion protein / Ribosomal protein L19 / Large ribosomal subunit protein uL4 / Large ribosomal subunit protein eL43 / Small ribosomal subunit protein uS11y / 60S ribosomal protein L11-1 / Small ribosomal subunit protein uS5 / Large ribosomal subunit protein eL21z/eL21y-like / Large ribosomal subunit protein uL18-like / 40S ribosomal protein S30 / Small ribosomal subunit protein uS10y / 40S ribosomal protein S27 / 60S ribosomal protein L23 / Large ribosomal subunit protein eL33y / Large ribosomal subunit protein uL2-like / Large ribosomal subunit protein eL31 / Small ribosomal subunit protein uS2 / 40S ribosomal protein S19-3 / Small ribosomal subunit protein uS13z/uS13y/uS13x / 60S ribosomal protein L29 / 60S ribosomal protein L39-3 / Large ribosomal subunit protein uL16 / Large ribosomal subunit protein eL32z / 40S ribosomal protein S6 / 40S ribosomal protein S7 / Small ribosomal subunit protein eS17-like / Large ribosomal subunit protein uL3 / Small ribosomal subunit protein uS15 / 40S ribosomal protein S24 / 40S ribosomal protein S21 / Large ribosomal subunit protein uL30y / Large ribosomal subunit protein eL14z / Small ribosomal subunit protein RACK1-like / 60S ribosomal protein L27 / 40S ribosomal protein S28 / Small ribosomal subunit protein uS9 / 60S ribosomal protein L44 / Large ribosomal subunit protein eL6 / 40S ribosomal protein S12 / Small ribosomal subunit protein uS4y / Large ribosomal subunit protein uL15x-like / Large ribosomal subunit protein eL24 / Large ribosomal subunit protein eL22 / Small ribosomal subunit protein uS17 / Small ribosomal subunit protein uS7 / Small ribosomal subunit protein uS3x / Large ribosomal subunit protein uL6z/uL6y / Ubiquitin-ribosomal protein eS31 fusion protein / 60S ribosomal protein L38 / 40S ribosomal protein S23 / Large ribosomal subunit protein uL22z / 60S ribosomal protein L18a / 60S ribosomal protein L13 / 40S ribosomal protein S26 / 40S ribosomal protein S8 / Large ribosomal subunit protein eL28z / 60S ribosomal protein L36 / Ribosomal protein L15 / 60S ribosomal protein L7a / Small ribosomal subunit protein uS8c / 60S ribosomal protein L18-2 / Small ribosomal subunit protein uS19 / Small ribosomal subunit protein eS10z / Large ribosomal subunit protein uL13w / Ribosomal protein L37 / Large ribosomal subunit protein uL24z / 40S ribosomal protein S29 / 40S ribosomal protein S4 / Large ribosomal subunit protein eL34 / Small ribosomal subunit protein eS32 / Large ribosomal subunit protein uL23 / Small ribosomal subunit protein eS1
Similarity search - Component
Biological speciesNicotiana tabacum (common tobacco)
Methodsingle particle reconstruction / cryo EM / Resolution: 2.2 Å
AuthorsSmirnova J / Loerke J / Kleinau G / Schmidt A / Buerger J / Meyer EH / Mielke T / Scheerer P / Bock R / Spahn CMT / Zoschke R
Funding support Germany, 1 items
OrganizationGrant numberCountry
German Research Foundation (DFG)416210002 Germany
CitationJournal: Nat Plants / Year: 2023
Title: Structure of the actively translating plant 80S ribosome at 2.2 Å resolution.
Authors: Julia Smirnova / Justus Loerke / Gunnar Kleinau / Andrea Schmidt / Jörg Bürger / Etienne H Meyer / Thorsten Mielke / Patrick Scheerer / Ralph Bock / Christian M T Spahn / Reimo Zoschke /
Abstract: In plant cells, translation occurs in three compartments: the cytosol, the plastids and the mitochondria. While the structures of the (prokaryotic-type) ribosomes in plastids and mitochondria are ...In plant cells, translation occurs in three compartments: the cytosol, the plastids and the mitochondria. While the structures of the (prokaryotic-type) ribosomes in plastids and mitochondria are well characterized, high-resolution structures of the eukaryotic 80S ribosomes in the cytosol have been lacking. Here the structure of translating tobacco (Nicotiana tabacum) 80S ribosomes was solved by cryo-electron microscopy with a global resolution of 2.2 Å. The ribosome structure includes two tRNAs, decoded mRNA and the nascent peptide chain, thus providing insights into the molecular underpinnings of the cytosolic translation process in plants. The map displays conserved and plant-specific rRNA modifications and the positions of numerous ionic cofactors, and it uncovers the role of monovalent ions in the decoding centre. The model of the plant 80S ribosome enables broad phylogenetic comparisons that reveal commonalities and differences in the ribosomes of plants and those of other eukaryotes, thus putting our knowledge about eukaryotic translation on a firmer footing.
History
DepositionSep 14, 2022-
Header (metadata) releaseAug 23, 2023-
Map releaseAug 23, 2023-
UpdateJun 24, 2026-
Current statusJun 24, 2026Processing site: PDBe / Status: Released

-
Structure visualization

Supplemental images

emd_15806.png

Downloads & links

-
Map

FileDownload / File: emd_15806.map.gz / Format: CCP4 / Size: 347.6 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
AnnotationTobacco 80S ribosome from cytosol
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesZ (Sec.)Y (Row.)X (Col.)
0.85 Å/pix.
x 450 pix.
= 381.6 Å		0.85 Å/pix.
x 450 pix.
= 381.6 Å		0.85 Å/pix.
x 450 pix.
= 381.6 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 0.848 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 0.6
Minimum - Maximum-6.969701 - 14.499104000000001
Average (Standard dev.)0.031135535 (±0.32280955)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions450450450
Spacing450450450
CellA=B=C: 381.6 Å
α=β=γ: 90.0 °

-
Supplemental data

-
Mask #1

Fileemd_15806_msk_1.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

-
Half map: Half-map A of the tobacco 80S ribosome

Fileemd_15806_half_map_1.map
AnnotationHalf-map_A of the tobacco 80S ribosome
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

-
Half map: Half-map B of the tobacco 80S ribosome

Fileemd_15806_half_map_2.map
AnnotationHalf-map_B of the tobacco 80S ribosome
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

-
Sample components

+
Entire : 40S subunit of the cytosolic 80S ribosome from tobacco

EntireName: 40S subunit of the cytosolic 80S ribosome from tobacco
Components
  • Complex: 40S subunit of the cytosolic 80S ribosome from tobacco
    • Protein or peptide: 40S ribosomal protein S4
    • Protein or peptide: 40S ribosomal protein S6
    • RNA: 18S rRNA
    • Protein or peptide: 40S ribosomal protein S10-1-like
    • Protein or peptide: 40S ribosomal protein S12
    • Protein or peptide: 40S ribosomal protein S17-like
    • Protein or peptide: 40S ribosomal protein S19-3
    • Protein or peptide: 40S ribosomal protein S3a
    • Protein or peptide: 40S ribosomal protein S21
    • Protein or peptide: 40S ribosomal protein S24
    • Protein or peptide: 40S ribosomal protein S25
    • Protein or peptide: 40S ribosomal protein S26
    • Protein or peptide: 40S ribosomal protein S27
    • Protein or peptide: 40S ribosomal protein S28
    • Protein or peptide: 40S ribosomal protein S30
    • Protein or peptide: ubiquitin-40S ribosomal protein S27a-like
    • Protein or peptide: 40S ribosomal protein S7
    • Protein or peptide: 40S ribosomal protein S8
    • Protein or peptide: guanine nucleotide-binding protein subunit beta-like protein
    • Protein or peptide: 40S ribosomal protein S20-2
    • Protein or peptide: 40S ribosomal protein S14-2
    • Protein or peptide: 40S ribosomal protein S23
    • Protein or peptide: 40S ribosomal protein S18
    • Protein or peptide: 40S ribosomal protein S29
    • Protein or peptide: 30S ribosomal protein S15, chloroplastic
    • Protein or peptide: 40S ribosomal protein S11-like
    • Protein or peptide: 40S ribosomal protein S15-like
    • Protein or peptide: 40S ribosomal protein SA
    • Protein or peptide: 40S ribosomal protein S3-2-like
    • Protein or peptide: 40S ribosomal protein S9-2-like
    • Protein or peptide: 40S ribosomal protein S2-3-like
    • Protein or peptide: 40S ribosomal protein S5-like
    • Protein or peptide: 40S ribosomal protein S15a-1
    • Protein or peptide: 40S ribosomal protein S16
    • RNA: mRNA
    • RNA: tRNA
    • RNA: 5S rRNA
    • Protein or peptide: 60S ribosomal protein L13
    • Protein or peptide: 60S ribosomal protein L14-1
    • Protein or peptide: Ribosomal protein L15
    • Protein or peptide: 60S ribosomal protein L18-2-like
    • Protein or peptide: Ribosomal protein L19
    • Protein or peptide: 60S ribosomal protein L18a
    • Protein or peptide: 60S ribosomal protein L21-1-like
    • Protein or peptide: 60S ribosomal protein L22-2-like
    • Protein or peptide: 60S ribosomal protein L24-like
    • Protein or peptide: eL27 (60S ribosomal protein L27)
    • Protein or peptide: eL28 (60S ribosomal protein L28)
    • Protein or peptide: 60S ribosomal protein L29
    • Protein or peptide: 60S ribosomal protein L30-like
    • Protein or peptide: eL31 (60S ribosomal protein L31)
    • Protein or peptide: 60S ribosomal protein L32-1
    • Protein or peptide: eL33 (60S ribosomal protein L35a)
    • Protein or peptide: 60S ribosomal protein L34
    • Protein or peptide: eL36 (60S ribosomal protein L36)
    • Protein or peptide: Ribosomal protein L37
    • Protein or peptide: 60S ribosomal protein L38
    • Protein or peptide: 60S ribosomal protein L39-3
    • Protein or peptide: ubiquitin-60S ribosomal protein L40
    • Protein or peptide: 60S ribosomal protein L41
    • Protein or peptide: 60S ribosomal protein L44
    • Protein or peptide: 60S ribosomal protein L37a
    • Protein or peptide: eL6 (60S ribosomal protein L6)
    • Protein or peptide: 60S ribosomal protein L7a
    • Protein or peptide: uL13 (60S ribosomal protein L13a)
    • Protein or peptide: 60S ribosomal protein L23
    • Protein or peptide: uL15 (60S ribosomal protein L27a)
    • Protein or peptide: uL16 (60S ribosomal protein L10)
    • Protein or peptide: 60S ribosomal protein L5-like
    • Protein or peptide: 50S ribosomal protein L22, chloroplastic
    • Protein or peptide: 60S ribosomal protein L23a
    • Protein or peptide: uL24 (60S ribosomal protein L26)
    • Protein or peptide: 60S ribosomal protein L35-like
    • Protein or peptide: uL2 (60S ribosomal protein L8)
    • Protein or peptide: 60S ribosomal protein L7-4-like
    • Protein or peptide: uL3 (60S ribosomal protein L3)
    • Protein or peptide: uL4 (60S ribosomal protein L4)
    • Protein or peptide: uL5 (60S ribosomal protein L11)
    • Protein or peptide: uL6 (60S ribosomal protein L9)
    • Protein or peptide: nascent chain
    • RNA: 25S rRNA
    • RNA: 5.8S rRNA
  • Ligand: MAGNESIUM ION
  • Ligand: POTASSIUM ION
  • Ligand: SPERMIDINE
  • Ligand: SPERMINE
  • Ligand: ZINC ION
  • Ligand: water

+
Supramolecule #1: 40S subunit of the cytosolic 80S ribosome from tobacco

SupramoleculeName: 40S subunit of the cytosolic 80S ribosome from tobacco
type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#82
Source (natural)Organism: Nicotiana tabacum (common tobacco)

+
Macromolecule #1: 40S ribosomal protein S4

MacromoleculeName: 40S ribosomal protein S4 / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 29.971178 KDa
SequenceString: MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLIIILRN RLKYALTYRE VISILMQRQV MVDSKVRTDK TYPAGFMDV VSIPKTNENF RLLYDTKGRF RLHSVRDEEA KFKLCKVRSV QFGQKGIPYL NTYDGRTIRY PDPLIKANDT I KLDLESNK ...String:
MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLIIILRN RLKYALTYRE VISILMQRQV MVDSKVRTDK TYPAGFMDV VSIPKTNENF RLLYDTKGRF RLHSVRDEEA KFKLCKVRSV QFGQKGIPYL NTYDGRTIRY PDPLIKANDT I KLDLESNK IVDFIKFDVG NVVMVTGGRN RGRVGVIKNR EKHKGSFETV HIQDALGHEF ATRLGNVFTL GKGTKPWVSL PK GKGIKLS IIEEARKRLA AQSATTA

UniProtKB: 40S ribosomal protein S4

+
Macromolecule #2: 40S ribosomal protein S6

MacromoleculeName: 40S ribosomal protein S6 / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 28.368293 KDa
SequenceString: MKFNIANPTT GCQKKLEIDD DQKLRAFFDK RISQEVSGDA LGDEFKGYVF KIMGGCDKQG FPMKQGVLTP GRVRLLLYRG TPCFRGYGR RNGERRRKSV RGCIVSPDLS VLNLVIVKKG ENDLPGLTDT EKPRMRGPKR ASKIRKLFNL SKEDDVRKYV N TYRRNFTT ...String:
MKFNIANPTT GCQKKLEIDD DQKLRAFFDK RISQEVSGDA LGDEFKGYVF KIMGGCDKQG FPMKQGVLTP GRVRLLLYRG TPCFRGYGR RNGERRRKSV RGCIVSPDLS VLNLVIVKKG ENDLPGLTDT EKPRMRGPKR ASKIRKLFNL SKEDDVRKYV N TYRRNFTT KNGKKASKAP KIQRLVTPLT LQRKRARIAD KKKRIAKAKS EAAEYQKLLA SRLKEQREKR SESLAKKRSR LS AASKPSI AA

UniProtKB: 40S ribosomal protein S6

+
Macromolecule #4: 40S ribosomal protein S10-1-like

MacromoleculeName: 40S ribosomal protein S10-1-like / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 23.12141 KDa
SequenceString: MVQSFCCCNR LWLQCDFSPL SPLLPAAMII SEKNRREISK YLFQEGVCYA KKDYNLAKHP LIDVPNLQVI KLMQSFKSKE YVRETFAWM HYYWYLTNDG IEFLRTYLNL PSEIVPATLK KSAKPLGRPM GGPPGDRPRG PPRFEGDRPR FGDREGYRAG P RGPPGEFG ...String:
MVQSFCCCNR LWLQCDFSPL SPLLPAAMII SEKNRREISK YLFQEGVCYA KKDYNLAKHP LIDVPNLQVI KLMQSFKSKE YVRETFAWM HYYWYLTNDG IEFLRTYLNL PSEIVPATLK KSAKPLGRPM GGPPGDRPRG PPRFEGDRPR FGDREGYRAG P RGPPGEFG GEKGGAPADY QPAFRGSGGR PGFGRGSGGF GGAPPSSSFS

UniProtKB: Small ribosomal subunit protein eS10z

+
Macromolecule #5: 40S ribosomal protein S12

MacromoleculeName: 40S ribosomal protein S12 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.190561 KDa
SequenceString:
MSGEDAAVPV VAAAETPAPA LGEPMDIMTA LQLVLKKSKA HGGLARGLHE GAKVIEKHAA QLCVLAEDCD QPDYVKLVKA LCADHNVSL ITVPNAKTLG EWAGLCKIDS EGKARKVVGC GCVVVKDYGE ETEGLHIVQE YVKSH

UniProtKB: 40S ribosomal protein S12

+
Macromolecule #6: 40S ribosomal protein S17-like

MacromoleculeName: 40S ribosomal protein S17-like / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 16.643303 KDa
SequenceString:
MGRVRTKTVK KSSRQVIERY YSKMTLDFHT NKKILEEVAI IPSKRLRNKI AGFSTHLMKR IQKGPVRGIS LKLQEEERER RMDFVPDES AIQTDRIEVD KETIDLLASL GMSELPGVVL KEEQPVAIAA PVGFGGRGGF GGAGGRRGGY

UniProtKB: Small ribosomal subunit protein eS17-like

+
Macromolecule #7: 40S ribosomal protein S19-3

MacromoleculeName: 40S ribosomal protein S19-3 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 16.034395 KDa
SequenceString:
MEAARTVKDV SPHEFVKAYA AHLKRSGKME LPEWTDIVKT GKLKELAPYD PDWYYIRAAS MARKIYLRGG LGVGGFRRIY GGNQRNGSR PRHFCKSSGS VARNILQQLQ NMNIVDFDPK GGRRITSNGQ RDLDQVAGRI AAAL

UniProtKB: 40S ribosomal protein S19-3

+
Macromolecule #8: 40S ribosomal protein S3a

MacromoleculeName: 40S ribosomal protein S3a / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 29.782572 KDa
SequenceString: MAVGKNKRIS KGKKGGKKKA ADPYAKKDWY DIKAPSVFDI KNVGKTLVTR TQGTKIASEG LKHRVFEVSL ADLQKDEDQS FRKIRLRAE DVQGKNVLTN FWGMDFTTDK LRSLVKKWQT LIEAHVDVKT TDSYTLRMFC IAFTKKRPNQ QKRTCYAQSS Q IRQIRRKM ...String:
MAVGKNKRIS KGKKGGKKKA ADPYAKKDWY DIKAPSVFDI KNVGKTLVTR TQGTKIASEG LKHRVFEVSL ADLQKDEDQS FRKIRLRAE DVQGKNVLTN FWGMDFTTDK LRSLVKKWQT LIEAHVDVKT TDSYTLRMFC IAFTKKRPNQ QKRTCYAQSS Q IRQIRRKM VEIMRNQASS CDLKELVAKF IPESIGREIE KATSSIFPLQ NVYIRKVKIL KAPKFDIGKL MEVHGDYSED VG VKLDRPA DETVAEAEPE IPGA

UniProtKB: Small ribosomal subunit protein eS1

+
Macromolecule #9: 40S ribosomal protein S21

MacromoleculeName: 40S ribosomal protein S21 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 9.307461 KDa
SequenceString:
MQNEEGQNVD LYIPRKCSAT NRVITSKDHA SVQLNVGHLD DKGLYIPGSF TTFALCGFIR AQGDADSALD RLWQKKKVEA RQQ

UniProtKB: 40S ribosomal protein S21

+
Macromolecule #10: 40S ribosomal protein S24

MacromoleculeName: 40S ribosomal protein S24 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.429315 KDa
SequenceString:
MADKAVTIRT RKFMTNRLLA RKQFIIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGGK STGFGLIYDS VENAKKYEP KYRLIRNGLD TKVEKSRKQM KERKNRAKKV RGVKKTKAGD AKKK

UniProtKB: 40S ribosomal protein S24

+
Macromolecule #11: 40S ribosomal protein S25

MacromoleculeName: 40S ribosomal protein S25 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 11.795916 KDa
SequenceString:
MAPKKAAPPP SSKPAKSGGG KQKKKKWSKG KQKEKVNNMV LFDKATYDKL LSEAPKYKLI TPSVLSDRLR ISGSLARKAI RDLMARGSI RMVSAHASQQ IYTRATNT

UniProtKB: 40S ribosomal protein S25

+
Macromolecule #12: 40S ribosomal protein S26

MacromoleculeName: 40S ribosomal protein S26 / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 14.540069 KDa
SequenceString:
MTFKRRNGGR NKHGRGHTKF IRCSNCGKCC PKDKAIKRFL VRNIVEQAAV RDVQEACAFE TYTLPKLYLK MQYCVSCAIH SKVVRVRSV TDRRVREPPQ RFRRPRDDLP KPGQAPRPTG GAPAAPRT

UniProtKB: 40S ribosomal protein S26

+
Macromolecule #13: 40S ribosomal protein S27

MacromoleculeName: 40S ribosomal protein S27 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 9.613144 KDa
SequenceString:
MTLPNDVDLL NPPAELEKRK HKLKRLVQSP NSFFMDVKCQ GCFNITTVFS HSQTVVVCGN CQTVLCQPTG GRARLTEGCS FRRKGD

UniProtKB: 40S ribosomal protein S27

+
Macromolecule #14: 40S ribosomal protein S28

MacromoleculeName: 40S ribosomal protein S28 / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 7.481715 KDa
SequenceString:
MESATKHAIV VKVMGRTGSR GQVTQVRVKF LDDQNRFIMR NVKGPVREGD VLTLLESERE ARRLR

UniProtKB: 40S ribosomal protein S28

+
Macromolecule #15: 40S ribosomal protein S30

MacromoleculeName: 40S ribosomal protein S30 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 6.953253 KDa
SequenceString:
MGKVHGSLAR AGKVRGQTPK VAKQDKKKKP RGRAHKRMQY NRRFVTAVVG FGKKRGPNSS EK

UniProtKB: 40S ribosomal protein S30

+
Macromolecule #16: ubiquitin-40S ribosomal protein S27a-like

MacromoleculeName: ubiquitin-40S ribosomal protein S27a-like / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 17.739734 KDa
SequenceString:
MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYTKPK KIKHKKKKVK LAVLQFYKVD DSGKVQRLRK ECPNAECGAG TFMANHFDRH YCGKCGLTYV YQKAGGD

UniProtKB: Ubiquitin-ribosomal protein eS31 fusion protein

+
Macromolecule #17: 40S ribosomal protein S7

MacromoleculeName: 40S ribosomal protein S7 / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 22.121541 KDa
SequenceString:
MYTSRQKIHK DKDAEPTEFE ESVAQALFDM ENTNQELKSE LKDLYINSAV QIDVSGNKKA VVIHVPYRLR KAFRKIHVRL VRELEKKFS GKDVIFIATR RIARPPKRGS AAQRPRSRTL TSVHDAILED VVVPAEIVGK RVRYRVDGSK IMKVFLDPKE R NNTEYKLE TFSAVYRKLS GKDVVFEYPI TEA

UniProtKB: 40S ribosomal protein S7

+
Macromolecule #18: 40S ribosomal protein S8

MacromoleculeName: 40S ribosomal protein S8 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 25.164039 KDa
SequenceString: MGISRDSMHK RRATGGKKKA WRKKRKYELG RQPANTKISA NKTVRRIRVR GGNVKWRALR LDTGNYSWGS EAVTRKTRIL DVVYNASNN ELVRTQTLVK SAIVQVDAAP FKQWYLQHYG VDIGRKKKGP AKKETTEEGE GAAAAAEETK KSNHVLRKIE T RQKDRKLD ...String:
MGISRDSMHK RRATGGKKKA WRKKRKYELG RQPANTKISA NKTVRRIRVR GGNVKWRALR LDTGNYSWGS EAVTRKTRIL DVVYNASNN ELVRTQTLVK SAIVQVDAAP FKQWYLQHYG VDIGRKKKGP AKKETTEEGE GAAAAAEETK KSNHVLRKIE T RQKDRKLD PHIEEQFGGG RLLACISSRP GQCGRADGYI LEGKELEFYM KKLQKKKGKA GAGGAA

UniProtKB: 40S ribosomal protein S8

+
Macromolecule #19: guanine nucleotide-binding protein subunit beta-like protein

MacromoleculeName: guanine nucleotide-binding protein subunit beta-like protein
type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 36.061844 KDa
SequenceString: MAQESLVLRG TMKAHTDWVT AIATPIDNSD MIVTSSRDKS LIVWSLTKDG PQYGVPRRRL TGHGHFVQDV VLSSDGMFAL SGSWDGELR LWDLQAGTTA RRFVGHTKDV LSVAFSVDNR QIVSASRDKT IKLWNTLGEC KYTIQEGDSH SDWVSCVRFS P NTLQPTIV ...String:
MAQESLVLRG TMKAHTDWVT AIATPIDNSD MIVTSSRDKS LIVWSLTKDG PQYGVPRRRL TGHGHFVQDV VLSSDGMFAL SGSWDGELR LWDLQAGTTA RRFVGHTKDV LSVAFSVDNR QIVSASRDKT IKLWNTLGEC KYTIQEGDSH SDWVSCVRFS P NTLQPTIV SGSWDRTVKI WNLTNCKLRS TLAGHAGYVN TVAVSPDGSL CASGGKDGTI LLWDLAEGKK LYSLDAGSII HA LCFSPNR YWLCAATETS IKIWDLESKS IVVDLKVDLK QESEMATEGT TGSACKNKIM YCTCLSWSAD GSTLFSGYTD GLI RVWGIG RY

UniProtKB: Small ribosomal subunit protein RACK1-like

+
Macromolecule #20: 40S ribosomal protein S20-2

MacromoleculeName: 40S ribosomal protein S20-2 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 13.651932 KDa
SequenceString:
MAYAAMKATK PGLEEPQEQI HKIRITLSSK NVKNLEKVCA DLVRGAKDKR LRVKGPVRMP TKVLNITTRK SPCGEGTNTW DRFELRVHK RVIDLFSSAD VVKQITSITI EPGVEVEVTI ADS

UniProtKB: Small ribosomal subunit protein uS10y

+
Macromolecule #21: 40S ribosomal protein S14-2

MacromoleculeName: 40S ribosomal protein S14-2 / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 16.375829 KDa
SequenceString:
MSKRRTREPK EETVTLGPAT REGELVFGVA HIFASFNDTF IHVTDLSGRE TMVRITGGMK VKADRDESSP YAAMLAAQDV SQRCKELGI NALHIKLRAT GGNKTKTPGP GAQSALRALA RSGMKIGRIE DVTPIPTDST RRKGGRRGRR L

UniProtKB: Small ribosomal subunit protein uS11y

+
Macromolecule #22: 40S ribosomal protein S23

MacromoleculeName: 40S ribosomal protein S23 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.771567 KDa
SequenceString:
MGKTRGMGAG RKLKSHRRRQ RWADKSYKKS HLGNEWKKPF AGSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGC LNYIEENDEV LIAGFGRKGH AVGDIPGVRF KVVKVSGVSL LALFKEKKEK PRS

UniProtKB: 40S ribosomal protein S23

+
Macromolecule #23: 40S ribosomal protein S18

MacromoleculeName: 40S ribosomal protein S18 / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 17.578473 KDa
SequenceString:
MSLVANEEFQ HILRVQNTNV DGKQKIMFAM TSIKGIGRRF ANIACKKADI DMNKRAGELS AAELDSLMVV VANPRQFKIP DWFLNRQKD YKDGKFSQVT SNALDMKLRD DLERLKKIRN HRGLRHYWGL RVRGQHTKTT GRRGKTVGVS KKR

UniProtKB: Small ribosomal subunit protein uS13z/uS13y/uS13x

+
Macromolecule #24: 40S ribosomal protein S29

MacromoleculeName: 40S ribosomal protein S29 / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 6.455581 KDa
SequenceString:
MGHSNIWNAH PKNYGPGSRT CRVCGNPHAI IRKYGLMCCR QCFRSNAKEI GFIKYR

UniProtKB: 40S ribosomal protein S29

+
Macromolecule #25: 30S ribosomal protein S15, chloroplastic

MacromoleculeName: 30S ribosomal protein S15, chloroplastic / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 17.099254 KDa
SequenceString:
MGRMHSRGKG ISASALPYKR TPPSWLKISA PDVEDNICKF AKKGLTPSQI GVILRDSHGI AQVKSVTGSK ILRILKAHGL APEIPEDLY HLIKKAVAIR KHLERNRKDK DSKFRLILVE SRIHRLARYY KKTKKLPPVW KYESTTASTL VA

UniProtKB: Small ribosomal subunit protein uS15

+
Macromolecule #26: 40S ribosomal protein S11-like

MacromoleculeName: 40S ribosomal protein S11-like / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 17.724816 KDa
SequenceString:
MAEQTEKAFL KQPGVFLSSK KTGKGKRPGK GGNRYFKSIG LGFKTPREAT EGTYIDKKCP FTGNVSIRGR ILAGTCHSAK MNRTIIVRR NYLHYVKKYQ RYEKRHSNIP AHISPCFRVK EGDHVIIGQC RPLSKTVRFN VLKVIPAGSA GGGKKAFTGM

UniProtKB: Small ribosomal subunit protein uS17

+
Macromolecule #27: 40S ribosomal protein S15-like

MacromoleculeName: 40S ribosomal protein S15-like / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 17.274441 KDa
SequenceString:
MADVEGADVA AGQPKKRTFK KFSYRGVDLD ALLDMSTDEL VKLFPARPRR RFQRGLKRKP MALIKKLRKA KREAPPGEKP EVVRTHLRN MIIVPEMIGS VIGIYNGKTF NQIEVKPEMI SHYLAEFSIS YKPVKHGRPG IGATHSSRFI PLK

UniProtKB: Small ribosomal subunit protein uS19

+
Macromolecule #28: 40S ribosomal protein SA

MacromoleculeName: 40S ribosomal protein SA / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 35.894105 KDa
SequenceString: MAAEGRTLST KEADIQMMLA AEVHLGTKNC DFQMERYVFK RRNDGIYIIN LGKTWEKLQM AARVIVAIEN PKDIIVQSAR PYGQRAVLK FAQYTGANAI AGRHTPGTFT NQLQTSYSEP RLLILTDPRT DHQPIKEAAL GNIPTIAFCD TDSPMRYVDI G IPANNKGK ...String:
MAAEGRTLST KEADIQMMLA AEVHLGTKNC DFQMERYVFK RRNDGIYIIN LGKTWEKLQM AARVIVAIEN PKDIIVQSAR PYGQRAVLK FAQYTGANAI AGRHTPGTFT NQLQTSYSEP RLLILTDPRT DHQPIKEAAL GNIPTIAFCD TDSPMRYVDI G IPANNKGK HSIGVLFWLL ARMVLQMRGS INQGHKWDVM VDLFFYREPE EAKEQQEEEA PAIDYADYSA GGDWSSSQIP EA QWTGDAA PSGPVVASGW SGEGVAEGGG WDTAAAPVPV PVSDAAPTAG GGWDTAAAPV PVPVSDAAPT AGGGWDTAAA PVP VPVSDA APTAGATGWE

UniProtKB: Small ribosomal subunit protein uS2

+
Macromolecule #29: 40S ribosomal protein S3-2-like

MacromoleculeName: 40S ribosomal protein S3-2-like / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 27.758545 KDa
SequenceString: MDTPVTQISK KRKFVADGVF FAELNEVLTR ELAEDGYSGV EVRVTPVRTE IIIRATRTQN VLGEKGRRIR ELTSVVQKRF KFKENSVEL YAEKVNNRGL CAVAQAESLR YKLLGGLAVR RACYGVLRFI MESGAKGCEV IVSGKLRAQR AKSMKFKDGY M ISSGQPVK ...String:
MDTPVTQISK KRKFVADGVF FAELNEVLTR ELAEDGYSGV EVRVTPVRTE IIIRATRTQN VLGEKGRRIR ELTSVVQKRF KFKENSVEL YAEKVNNRGL CAVAQAESLR YKLLGGLAVR RACYGVLRFI MESGAKGCEV IVSGKLRAQR AKSMKFKDGY M ISSGQPVK EYIDSAVRHI LMRQGVLGIK VKIMLDWDPK GKQGPTTPLP DLVTIHSPKE EEDYIRASVV VPDVVPTMLP TD IPIPVPV M

UniProtKB: Small ribosomal subunit protein uS3x

+
Macromolecule #30: 40S ribosomal protein S9-2-like

MacromoleculeName: 40S ribosomal protein S9-2-like / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 23.103805 KDa
SequenceString: MVHVAFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYA LSRIRNAARM LLTLDEKDPR RIFEGEALLR RMNRYGLLD ESQNKLDYVL SLTVENFLER RLQTLVFKTG MAKSIHHARV LIRQRHIRVG RQVVNVPSFM VRLDSQKHID F SLISPFGG ...String:
MVHVAFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYA LSRIRNAARM LLTLDEKDPR RIFEGEALLR RMNRYGLLD ESQNKLDYVL SLTVENFLER RLQTLVFKTG MAKSIHHARV LIRQRHIRVG RQVVNVPSFM VRLDSQKHID F SLISPFGG GRPGRVKRKN QKAAAKKASG GDGDEEDEE

UniProtKB: Small ribosomal subunit protein uS4y

+
Macromolecule #31: 40S ribosomal protein S2-3-like

MacromoleculeName: 40S ribosomal protein S2-3-like / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 30.652682 KDa
SequenceString: MAERGGERGG FGRGFGGRGG RGGDRGGRGR GGRRPRRETE EEKWVPVTKL GRLVKDNKIR SLEQIYLHSL PIKEFQIIDT LIGPSLKDE VMKIMPVQKQ TRAGQRTRFK AFVVVGDGNG HVGLGVKCSK EVATAIRGAI ILAKLSVIPV RRGYWGNKIG K PHTVPCKV ...String:
MAERGGERGG FGRGFGGRGG RGGDRGGRGR GGRRPRRETE EEKWVPVTKL GRLVKDNKIR SLEQIYLHSL PIKEFQIIDT LIGPSLKDE VMKIMPVQKQ TRAGQRTRFK AFVVVGDGNG HVGLGVKCSK EVATAIRGAI ILAKLSVIPV RRGYWGNKIG K PHTVPCKV TGKCGSVTVR MVPAPRGAGI VAARVPKKVL QFAGIEDVFT SSRGSTKTLG NFVKATFDCL MKTYGFLTPD FW KETRFTK SPFQEYADIL SKPTSKVIIS TTEEAPAPER VEA

UniProtKB: Small ribosomal subunit protein uS5

+
Macromolecule #32: 40S ribosomal protein S5-like

MacromoleculeName: 40S ribosomal protein S5-like / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 23.373857 KDa
SequenceString: MDAGVVAAPV DASAENKVHS DVMLFNRWTY DDVQINDISV EDYITATASK HPVYMPHTAG RYQAKRFRKA QCPIVERLTN SLMMHGRNN GKKLMAVRII KHAMEIIHLL TDQNPIQVIV DAVINSGPRE DATRIGSAGV VRRQAVDISP LRRVNQAIYL L TTGARESA ...String:
MDAGVVAAPV DASAENKVHS DVMLFNRWTY DDVQINDISV EDYITATASK HPVYMPHTAG RYQAKRFRKA QCPIVERLTN SLMMHGRNN GKKLMAVRII KHAMEIIHLL TDQNPIQVIV DAVINSGPRE DATRIGSAGV VRRQAVDISP LRRVNQAIYL L TTGARESA FRNIKTIAEC LADELINAAK GSSNSYAIKK KDEIERVAKA NR

UniProtKB: Small ribosomal subunit protein uS7

+
Macromolecule #33: 40S ribosomal protein S15a-1

MacromoleculeName: 40S ribosomal protein S15a-1 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 14.815363 KDa
SequenceString:
MVRVSVLNDA LKSMYNAEKR GKRQVMIRPS SKVIIKFLIV MQKHGYIGEF EYVDDHRSGK IVVELNGRLN KCGVISPRFD VGVKEIEGW TARLLPSRQF GYIVLTTSAG IMDHEEARRK NVGGKVLGFF Y

UniProtKB: Small ribosomal subunit protein uS8c

+
Macromolecule #34: 40S ribosomal protein S16

MacromoleculeName: 40S ribosomal protein S16 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 16.731734 KDa
SequenceString:
MNAAPAAVES VQCFGRKKTA VAVTHCKRGR GLIKINGVPI ELVQPEILRY KAFEPILLLG RHRFAGVDMR IRVKGGGHTS QIYAIRQSI AKALVAFYQK YVDEQQKKEI KDILVRYDRT LLVADPRRCE PKKFGGRGAR ARFQKSYR

UniProtKB: Small ribosomal subunit protein uS9

+
Macromolecule #38: 60S ribosomal protein L13

MacromoleculeName: 60S ribosomal protein L13 / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 23.595523 KDa
SequenceString: MKHNNVIPNG HFKKHWQNYV RTWFNQPARK TRRRAARQQK AVKIFPRPTA GSLRPIVHGQ TLKYNMKVRA GRGFSLEELK AAGIPKKLA PTIGIAVDHR RRNRSLEGLQ TNVQRLKTYK AKLVIFPRRA KKVKAGDSSA EELATATQVQ GSYMPITREQ P AVDLVKVT ...String:
MKHNNVIPNG HFKKHWQNYV RTWFNQPARK TRRRAARQQK AVKIFPRPTA GSLRPIVHGQ TLKYNMKVRA GRGFSLEELK AAGIPKKLA PTIGIAVDHR RRNRSLEGLQ TNVQRLKTYK AKLVIFPRRA KKVKAGDSSA EELATATQVQ GSYMPITREQ P AVDLVKVT DEMKSFNAYG KLRIERTNAR HIGARLKRAA EAEKEEKK

UniProtKB: 60S ribosomal protein L13

+
Macromolecule #39: 60S ribosomal protein L14-1

MacromoleculeName: 60S ribosomal protein L14-1 / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.443432 KDa
SequenceString:
MPFKRFVEIG RVALVNYGKD YGKLVVIVDV IDQNRALIDA PDMVRSQINF KRLSLTDIKI DIKRIPKKKT LVAAMEAADV KNKWESSSW GRKLIVQKRR ASLNDFDRFK LMLAKIKRAG VVRQELAKLK KETVA

UniProtKB: Large ribosomal subunit protein eL14z

+
Macromolecule #40: Ribosomal protein L15

MacromoleculeName: Ribosomal protein L15 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 24.228266 KDa
SequenceString: MGAYTYVSEL WRKKQSDVMR FLQRVRCWEY RQLPSIVRVT RPTRPDKARR LGYKAKQGYV VYRVRVKRGG RKRPVPKGIV YGKPTNQGV TQLKFQRSKR SVAEERAGRK LGGLKVLNSY WINEDSTYKY YEVILVDAAH AAIRNDPRIN WICNPVHKHR E LRGLTSAG ...String:
MGAYTYVSEL WRKKQSDVMR FLQRVRCWEY RQLPSIVRVT RPTRPDKARR LGYKAKQGYV VYRVRVKRGG RKRPVPKGIV YGKPTNQGV TQLKFQRSKR SVAEERAGRK LGGLKVLNSY WINEDSTYKY YEVILVDAAH AAIRNDPRIN WICNPVHKHR E LRGLTSAG KKYRGLRGKG HLYHKNRPSR RGTWKRNQTL SLRRYR

UniProtKB: Ribosomal protein L15

+
Macromolecule #41: 60S ribosomal protein L18-2-like

MacromoleculeName: 60S ribosomal protein L18-2-like / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 20.905824 KDa
SequenceString:
MGIDLKAGGK SKKTKRTAPK SDDVYLKLLV KLYRFLVRRT GSKFNAVILK RLFMSKINKP PLSLSRLISY AKGKEDKVVV IVGTITDDV RAYEVPALKV CALRFTKTAR ARIEKAGGEC LTFDQLALRA PLGQNTLLLR GPKNAREAVK HFGPAPGVPH S HTKPFVRS KGRKFERARG RRNSRGYKA

UniProtKB: 60S ribosomal protein L18-2

+
Macromolecule #42: Ribosomal protein L19

MacromoleculeName: Ribosomal protein L19 / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 25.05574 KDa
SequenceString: MVSLKLQKRL AASVLKCGRG KVWLDPNEGN EISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARRMKEAK RKGRHSGYGK RKGTREARL PTKVLWMRRM RVLRRLLRKY RESKKIDRHM YHDMYMKVKG NVFKNKRVLM ENIHKTKAEK AREKTLSDQF E ARRAKNKA ...String:
MVSLKLQKRL AASVLKCGRG KVWLDPNEGN EISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARRMKEAK RKGRHSGYGK RKGTREARL PTKVLWMRRM RVLRRLLRKY RESKKIDRHM YHDMYMKVKG NVFKNKRVLM ENIHKTKAEK AREKTLSDQF E ARRAKNKA SRERKFARRE ERLAQGPVER PMQPAAPAAS ATPAQTAQGG SKKSKK

UniProtKB: Ribosomal protein L19

+
Macromolecule #43: 60S ribosomal protein L18a

MacromoleculeName: 60S ribosomal protein L18a / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 21.513348 KDa
SequenceString:
MVTYKFHQYQ VVGRALPTEN DEHPKIYRMK LWATNEVRAK SKFWYYLRKL KKVKKSNGQM LAINEIFEKN PTKIKNYGIW LRYQSRTGY HNMYKEYRDT TLNGAVEQMY TEMASRHRVR HHCIQIIKTA TIPAKLCKRE STKQFHDSKI KFPLVFKKVR P PSRKLKTT YKATRPNLFM

UniProtKB: 60S ribosomal protein L18a

+
Macromolecule #44: 60S ribosomal protein L21-1-like

MacromoleculeName: 60S ribosomal protein L21-1-like / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 18.716885 KDa
SequenceString:
MPAGHGLRSR TRDSFSRAFR KKGTIPLSTY LRIFKIGDYV DIKVNGAIHK GMPHKFYHGR TGRVWNVTKR AVGVEVNKQV RNKILRKRI HVRIEHVQLS RCTEEVKERM KKNDQLKAEA KARGEVISTK RQPVGPKPGF MVEGATLETV TPIPYDVVND L KGGY

UniProtKB: Large ribosomal subunit protein eL21z/eL21y-like

+
Macromolecule #45: 60S ribosomal protein L22-2-like

MacromoleculeName: 60S ribosomal protein L22-2-like / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 14.277366 KDa
SequenceString:
MSKGSSGGGA MKGGKKKGAT FVIDCSKPVE DKIMEIASLE KFLQERIKVG GKAGALGDSV TVTRDKTKIT VTSDTTFSKR YLKYLTKKY LKKNNVRDWL RVISSNKDRN VYELRYFNIA ENEAEEED

UniProtKB: Large ribosomal subunit protein eL22

+
Macromolecule #46: 60S ribosomal protein L24-like

MacromoleculeName: 60S ribosomal protein L24-like / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 18.606016 KDa
SequenceString:
MVLKTELCRF SGGKIYPGRG IRFIRSDSQV FLFLNSKCKR YFHNRLKPSK LTWTAMYRKQ HKKDIAQEAV KKRRRATKKP YSRSIVGAT LEVIQKKRTE RPEVRDAARE AALREIKERI KKTKDEKKAK KAEVQAKSQK AGGKGNMPKG AGGKGPKLGG G GGKR

UniProtKB: Large ribosomal subunit protein eL24

+
Macromolecule #47: eL27 (60S ribosomal protein L27)

MacromoleculeName: eL27 (60S ribosomal protein L27) / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.722707 KDa
SequenceString:
MVKFLKPNKA VIILQGKYAG RKAVIIRAFD EGTRDRPYGH CLVAGISKYP KKVIRKDSAK KQAKKSRVKT FIKLVNYNHI MPTRYTLDV DLKDVVNVDV LQSRDKKVTA AKEAKARLEE RFKTGKNRWF FTKLRF

UniProtKB: 60S ribosomal protein L27

+
Macromolecule #48: eL28 (60S ribosomal protein L28)

MacromoleculeName: eL28 (60S ribosomal protein L28) / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.954613 KDa
SequenceString:
MTTVPGQLVW EIVKKNNSFL VKEFGNGTAG VVFSKEPNNL YNLHSYKHSG LANKKTVTIQ AEGKDKSVLL ATSKTKKQNK PSTLLNKSV MKKEFRRMSK AVTNQVADNY YRPDLKKAAL ARLSAVNRSL KVAKSGVKKK NRQA

UniProtKB: Large ribosomal subunit protein eL28z

+
Macromolecule #49: 60S ribosomal protein L29

MacromoleculeName: 60S ribosomal protein L29 / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 7.132044 KDa
SequenceString:
MAKSKNHTAH NQSYKAHRNG IKKPRKHRHS STKGMDPKFL RNQRYARKHN NNKSVGSADE E

UniProtKB: 60S ribosomal protein L29

+
Macromolecule #50: 60S ribosomal protein L30-like

MacromoleculeName: 60S ribosomal protein L30-like / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 12.420518 KDa
SequenceString:
MATTGKKTKK THESINNRLA LVMKSGKYSL GYKTVLKTLR SSKGKLILIS NNCPPLRKSE IEYYAMLAKV GVHHFNGNNV DLGTACGKY FRVSCLSIID PGDSDIIKSL PGDH

UniProtKB: Large ribosomal subunit protein eL30

+
Macromolecule #51: eL31 (60S ribosomal protein L31)

MacromoleculeName: eL31 (60S ribosomal protein L31) / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 13.894171 KDa
SequenceString:
MSDKTKGRKE EVVTREYTIN LHKRLHSCTF KKKAPTAIKE IRKFAQKAMG TKDVRVDVKL NKQIWSRGIR SVPRRVRVRI ARKRNDDED AKEELYSLVT VAEIPAEGLK GLGTKIIEDE D

UniProtKB: Large ribosomal subunit protein eL31

+
Macromolecule #52: 60S ribosomal protein L32-1

MacromoleculeName: 60S ribosomal protein L32-1 / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.665528 KDa
SequenceString:
MAVPLLTKKV VKKRVKRFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGC VLMPNIGYGS DKKTRHYLPN GFKKFVVHNA SELEVLMMH NRTYCAEIAH NVSTRKRKEI VERAAQLDVV ITNKLARLRS QEDE

UniProtKB: Large ribosomal subunit protein eL32z

+
Macromolecule #53: eL33 (60S ribosomal protein L35a)

MacromoleculeName: eL33 (60S ribosomal protein L35a) / type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 12.959179 KDa
SequenceString:
MVKGRQGERV RLYVRGTVLG YKRSKSNQYP STSLIQIEGV NTKEEVDWYL GKRMAYIYKA KTKKNNSHYR CIWGKVCRPH GNSGVVRAK FKSNLPPKSM GSKVRVFMYP SNI

UniProtKB: Large ribosomal subunit protein eL33y

+
Macromolecule #54: 60S ribosomal protein L34

MacromoleculeName: 60S ribosomal protein L34 / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 13.788358 KDa
SequenceString:
MVQRLTYRKR HSYATKSNQH RVVKTPGGKL IYQSTKKRAS GPKCPVTGKR IQGIPHLRPT EYKRSRLSRN RRTVNRAYGG VLSGSAVRE RIIRAFLVEE QKIVKKVLKI QKAKEKLAAK S

UniProtKB: Large ribosomal subunit protein eL34

+
Macromolecule #55: eL36 (60S ribosomal protein L36)

MacromoleculeName: eL36 (60S ribosomal protein L36) / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 12.361817 KDa
SequenceString:
MAPKQPNTGL SVGLNKGHVV TKKELAPRPS DRKGKTSKRV HFVRSLIREV AGFAPYEKRI TELLKVGKDK RALKVAKRKL GTHKRAKKK REEMSNALRK MRAAGGGEKK K

UniProtKB: 60S ribosomal protein L36

+
Macromolecule #56: Ribosomal protein L37

MacromoleculeName: Ribosomal protein L37 / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 10.879783 KDa
SequenceString:
MGKGTGSFGK RRNKTHTLCV RCGRRSFHIQ KSRCSACAYP AARLRKYNWS VKALRRKTTG TGRMRYLRNV PRRFKTNFRE GTEATPRKK GAAVAS

UniProtKB: Ribosomal protein L37

+
Macromolecule #57: 60S ribosomal protein L38

MacromoleculeName: 60S ribosomal protein L38 / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 8.101704 KDa
SequenceString:
MPKQIHEIKD FLLTARRKDA RTVKIKKNKD MVKFKVRCSK YLYTLCVSDF EKADKLKQSL PPGLSVQDL

UniProtKB: 60S ribosomal protein L38

+
Macromolecule #58: 60S ribosomal protein L39-3

MacromoleculeName: 60S ribosomal protein L39-3 / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 6.503839 KDa
SequenceString:
MPSHKTFMIK KKLAKKQRQN RPIPYWIRMR TDNTIRYNAK RRHWRRTKLG F

UniProtKB: 60S ribosomal protein L39-3

+
Macromolecule #59: ubiquitin-60S ribosomal protein L40

MacromoleculeName: ubiquitin-60S ribosomal protein L40 / type: protein_or_peptide / ID: 59 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 14.717386 KDa
SequenceString:
MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGIIEP SLMALARKY NQEKMICRKC YARLHPRAVN CRKKKCGHSN QLRPKKKIK

UniProtKB: Ubiquitin-ribosomal protein eL40 fusion protein

+
Macromolecule #60: 60S ribosomal protein L41

MacromoleculeName: 60S ribosomal protein L41 / type: protein_or_peptide / ID: 60 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 3.445437 KDa
SequenceString:
MRAKWKKKRM RRLKRKRRKM RQRSK

UniProtKB: Small ribosomal subunit protein eS32

+
Macromolecule #61: 60S ribosomal protein L44

MacromoleculeName: 60S ribosomal protein L44 / type: protein_or_peptide / ID: 61 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 12.037346 KDa
SequenceString:
MVNVPKTKKT YCKSKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQGCKHV SQHPIKRCK HFEIGGDKKG KGTSLF

UniProtKB: 60S ribosomal protein L44

+
Macromolecule #62: 60S ribosomal protein L37a

MacromoleculeName: 60S ribosomal protein L37a / type: protein_or_peptide / ID: 62 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 10.280108 KDa
SequenceString:
MTKRTKKAGI VGKYGTRYGA SLRKQIKKME VSQHSKYFCE FCGKYAVKRK AVGIWGCKDC GKVKAGGAYT LNTASAVTVR STIRRLREQ TES

UniProtKB: Large ribosomal subunit protein eL43

+
Macromolecule #63: eL6 (60S ribosomal protein L6)

MacromoleculeName: eL6 (60S ribosomal protein L6) / type: protein_or_peptide / ID: 63 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 25.536387 KDa
SequenceString: MAAKKSPRNP ELIRGVGKLS RSKMYHKKGL WAIKKKNGGS FPVHKKAAAV APPAVKPPKF YPADDVAKPL VNKHKPKPTK LRASITPGT VLIILAGRFK GKRVVFLKQL KSGLLLVSGP FKLNGVPLRR VNQAYVIGTS TKVDISGVNV EKIDDKYFAK Q AEKKQKKG ...String:
MAAKKSPRNP ELIRGVGKLS RSKMYHKKGL WAIKKKNGGS FPVHKKAAAV APPAVKPPKF YPADDVAKPL VNKHKPKPTK LRASITPGT VLIILAGRFK GKRVVFLKQL KSGLLLVSGP FKLNGVPLRR VNQAYVIGTS TKVDISGVNV EKIDDKYFAK Q AEKKQKKG EGEFFEDKKE EKKNVLPQGK KDDQKAVDEA LIKAVECVPE LKAYLSARFS LKSCMKPHEL VF

UniProtKB: Large ribosomal subunit protein eL6

+
Macromolecule #64: 60S ribosomal protein L7a

MacromoleculeName: 60S ribosomal protein L7a / type: protein_or_peptide / ID: 64 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 29.432219 KDa
SequenceString: MAPKKGVAVA AKKKPVQAKV VNPLFEKRPK QFGIGGALPP KKDLTRFVRW PQVVRIQRKR RILKQRLKVP PSLNQFSKTL DKNLATNLF KMLLKYRPED KAAKKERLLK RAQAEAEGKT PETKKPIIVK YGLKHITYLI EQNKAQLVVI AHDVDPIELV V WLPALCRK ...String:
MAPKKGVAVA AKKKPVQAKV VNPLFEKRPK QFGIGGALPP KKDLTRFVRW PQVVRIQRKR RILKQRLKVP PSLNQFSKTL DKNLATNLF KMLLKYRPED KAAKKERLLK RAQAEAEGKT PETKKPIIVK YGLKHITYLI EQNKAQLVVI AHDVDPIELV V WLPALCRK MEIPYCIVKG KARLGSIVHK KTASALCLTT VKNEDKMEFS RILEAIKANF NDKYEENRKK WGGGVMGSKS QA RTKAKER VLAKEAAQRM N

UniProtKB: 60S ribosomal protein L7a

+
Macromolecule #65: uL13 (60S ribosomal protein L13a)

MacromoleculeName: uL13 (60S ribosomal protein L13a) / type: protein_or_peptide / ID: 65 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 23.525217 KDa
SequenceString: MVSGSGISAR RIVVDARHHM LGRLSSILAK ELLNGQKVVV VRCEEICLSG GLVRQKMKYL RFLRKRMNTK PSHGPIHFRA PSKILWRTI RGMIPHKTKR GAAALARLKV YEGVPPPYDK IKRMVIPDAL KVLRLQAGHK YCLLGKLSSE VGWNHYDTIK E LENKRKER ...String:
MVSGSGISAR RIVVDARHHM LGRLSSILAK ELLNGQKVVV VRCEEICLSG GLVRQKMKYL RFLRKRMNTK PSHGPIHFRA PSKILWRTI RGMIPHKTKR GAAALARLKV YEGVPPPYDK IKRMVIPDAL KVLRLQAGHK YCLLGKLSSE VGWNHYDTIK E LENKRKER AQVAYERRKQ LAKLRVKAEK AAEEKLGPQL AIIAPIKY

UniProtKB: Large ribosomal subunit protein uL13w

+
Macromolecule #66: 60S ribosomal protein L23

MacromoleculeName: 60S ribosomal protein L23 / type: protein_or_peptide / ID: 66 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 15.040858 KDa
SequenceString:
MSKRGRGGSA GNKFRMSLGL PVAATINCAD NTGAKNLYII SVKGIKGRLN RLPSACVGDM VMATVKKGKP DLRKKVMPAV VVRQRKPWR RKDGVFMYFE DNAGVIVNPK GEMKGSAITG PIGKECADLW PRIASAANAI V

UniProtKB: 60S ribosomal protein L23

+
Macromolecule #67: uL15 (60S ribosomal protein L27a)

MacromoleculeName: uL15 (60S ribosomal protein L27a) / type: protein_or_peptide / ID: 67 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 16.578416 KDa
SequenceString:
MTTRFKKNRK KRGHVSAGHG RVGKHRKHPG GRGNAGGMHH HRILFDKYHP GYFGKVGMRY FHKLRNKFHC PTINIDNLWS LVPQEVKDK AKSSNATAPF IDVTQYGYFK VLGKGVLPQN QAVVVKAKLI SKNAEKKIKE AGGAVVLTA

UniProtKB: Large ribosomal subunit protein uL15x-like

+
Macromolecule #68: uL16 (60S ribosomal protein L10)

MacromoleculeName: uL16 (60S ribosomal protein L10) / type: protein_or_peptide / ID: 68 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 25.01242 KDa
SequenceString: MGRRPARCYR QIKNKPYPKS RFCRGVPDPK IRIYDVGMKK KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMTKSA GKDAFHLRV RVHPFHVLRI NKMLSCAGAD RLQTGMRGAF GKPQGVCARV AIGQVLLSVR CKDGNANHAQ EALRRAKFKF P GRQKIIVS ...String:
MGRRPARCYR QIKNKPYPKS RFCRGVPDPK IRIYDVGMKK KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMTKSA GKDAFHLRV RVHPFHVLRI NKMLSCAGAD RLQTGMRGAF GKPQGVCARV AIGQVLLSVR CKDGNANHAQ EALRRAKFKF P GRQKIIVS RKWGFTKFSR TDYLKYKSEN RIIPDGVNAK LLGCHGRLAA RQPGRAFLEA VGN

UniProtKB: Large ribosomal subunit protein uL16

+
Macromolecule #69: 60S ribosomal protein L5-like

MacromoleculeName: 60S ribosomal protein L5-like / type: protein_or_peptide / ID: 69 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 34.627273 KDa
SequenceString: MAFIKVQKTR AYFKRFQVKF KRRREGKTDY RARNRLINQD KNKYNTPKYR FVVRFTNKDI IAQIVSASIA GDMILASAYA RELPQYGLK VGLTNYAAAY CTGLLLARRV LKKLEMDEEY QGNPEASGED YSVEPAESRR PFRALLDVGL IRTTTGNRVF G ALKGALDG ...String:
MAFIKVQKTR AYFKRFQVKF KRRREGKTDY RARNRLINQD KNKYNTPKYR FVVRFTNKDI IAQIVSASIA GDMILASAYA RELPQYGLK VGLTNYAAAY CTGLLLARRV LKKLEMDEEY QGNPEASGED YSVEPAESRR PFRALLDVGL IRTTTGNRVF G ALKGALDG GLDIPHSEKR FAGFSKDSKQ LDADVHRKYI YGGHVATYMK TLTEDEPEKY QSHFSEYIKQ GLEADDLEEM YK KVHAAIR ADPSPKKSEK QPPKQHKRYN LKKLTYEERK AKLIERLNAL NSAAGNDDDE EDDD

UniProtKB: Large ribosomal subunit protein uL18-like

+
Macromolecule #70: 50S ribosomal protein L22, chloroplastic

MacromoleculeName: 50S ribosomal protein L22, chloroplastic / type: protein_or_peptide / ID: 70 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 20.136207 KDa
SequenceString:
MVKYSKEPDN PTKSCKARGS SLRVHFKNTR ETAHALRKMP LDKAKRYLED VLAHKQAIPF TRFCRGVGRT AQAKNRHSSG QGRWPVKST KFILDLLKNA ESNADVKGLD VDLLFISHIQ VNQAQKQRRR TYRAHGRINP YMSHPCHIEL TLSEKEEYVK K EPETQLAP RKTKGSS

UniProtKB: Large ribosomal subunit protein uL22z

+
Macromolecule #71: 60S ribosomal protein L23a

MacromoleculeName: 60S ribosomal protein L23a / type: protein_or_peptide / ID: 71 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 17.321516 KDa
SequenceString:
MAPAKADPSK KSDPKAQAAK VAKAVKSGST LKKKSQKIRT KVTFHRPKTL KKDRNPKYPR ISAPGRNKLD QYGILKYPLT TESAMKKIE DNNTLVFIVD IKADKKKIKD AVKKMYDIQT KKVNTLIRPD GTKKAYVRLT PDYDALDVAN KIGII

UniProtKB: Large ribosomal subunit protein uL23

+
Macromolecule #72: uL24 (60S ribosomal protein L26)

MacromoleculeName: uL24 (60S ribosomal protein L26) / type: protein_or_peptide / ID: 72 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 16.748537 KDa
SequenceString:
MKYNPRVSSS RRKSRKAHFT APSSVRRVLM SAPLSSDLRT KYNVRSMPVR KDDEVQVVRG TYKGREGKVV QVYRKKWVIH IERITREKV NGSTVNVGIH PSKVVVTKLR LDKDRKSLLD RKAKGRAAAD KDKGTKFTAE DIMQTVD

UniProtKB: Large ribosomal subunit protein uL24z

+
Macromolecule #73: 60S ribosomal protein L35-like

MacromoleculeName: 60S ribosomal protein L35-like / type: protein_or_peptide / ID: 73 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 14.352466 KDa
SequenceString:
MARIKVHELR NKTKTELLAQ LKDLKAELAL LRVAKVTGGA PNKLSKIKVV RLSIAQVLTV ISQKQKTALR EAYKNKKYLP LDLRPKKTR AIRKRLTKHQ VSLKTEREKK KEMYFPIRKY AIKV

UniProtKB: 60S ribosomal protein L35-like

+
Macromolecule #74: uL2 (60S ribosomal protein L8)

MacromoleculeName: uL2 (60S ribosomal protein L8) / type: protein_or_peptide / ID: 74 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 28.220734 KDa
SequenceString: MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDYGERNGY LKGVVSEIIH DPGRGAPLAR VTFRHPFRYK HQKELFVAAE GMYTGQFIY CGKKANLMVG NVLALRSIPE GAVVCNVEHK VGDRGVFARC SGDYAIVISH NPDNGTTRIK LPSGAKKIVP S GCRAMIGQ ...String:
MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDYGERNGY LKGVVSEIIH DPGRGAPLAR VTFRHPFRYK HQKELFVAAE GMYTGQFIY CGKKANLMVG NVLALRSIPE GAVVCNVEHK VGDRGVFARC SGDYAIVISH NPDNGTTRIK LPSGAKKIVP S GCRAMIGQ VAGGGRTEKP MLKAGNAYHK YRVKRNCWPK VRGVAMNPVE HPHGGGNHQH IGHASTVRRD APPGQKVGLI AA RRTGRLR GQAAATAAKA DKA

UniProtKB: Large ribosomal subunit protein uL2-like

+
Macromolecule #75: 60S ribosomal protein L7-4-like

MacromoleculeName: 60S ribosomal protein L7-4-like / type: protein_or_peptide / ID: 75 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 28.148949 KDa
SequenceString: MGEGGVLVPE SVLKKQKRSE EWALVKKQEL EAAKKKNTEN RKLIYNRAKQ YAKEYEAQER ELIQLKREAR LKGGFYVDPE AKLLFIIRI RGINAMAPQT KKILQLLRLR QIFNGVFLKV NKATVNMLHR VEPYVTYGYP NLKSIRELIY KRGYGKVEKQ R IALTDNSV ...String:
MGEGGVLVPE SVLKKQKRSE EWALVKKQEL EAAKKKNTEN RKLIYNRAKQ YAKEYEAQER ELIQLKREAR LKGGFYVDPE AKLLFIIRI RGINAMAPQT KKILQLLRLR QIFNGVFLKV NKATVNMLHR VEPYVTYGYP NLKSIRELIY KRGYGKVEKQ R IALTDNSV IEQVLGKHGI ICIEDLVHEI ITVGPHFKEA NNFLWPFQLK APLGGLKKKR NHYVEGGDAG NRENYINELI RR MN

UniProtKB: Large ribosomal subunit protein uL30y

+
Macromolecule #76: uL3 (60S ribosomal protein L3)

MacromoleculeName: uL3 (60S ribosomal protein L3) / type: protein_or_peptide / ID: 76 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 44.507215 KDa
SequenceString: MSHRKFEHPR HGSLGFLPRK RAARHRGKVK AFPKDDPSKP CKLTAFLGYK AGMTHIVRDV EKPGSKLHKK ETCEAVTIIE TPPMVIVGV VGYVKTPRGL RCLNTVWAQH LSEELKRRFY KNWCKSKKKA FLKYSKKYET DEGKKDIQTQ LEKLKKYACV I RVLAHTQI ...String:
MSHRKFEHPR HGSLGFLPRK RAARHRGKVK AFPKDDPSKP CKLTAFLGYK AGMTHIVRDV EKPGSKLHKK ETCEAVTIIE TPPMVIVGV VGYVKTPRGL RCLNTVWAQH LSEELKRRFY KNWCKSKKKA FLKYSKKYET DEGKKDIQTQ LEKLKKYACV I RVLAHTQI RKMKGLKQKK AHLMEIQVNG GTIAQKVDFA YGFFEKQVPV DAVFQKDEMI DIIGVTKGKG YEGVVTRWGV TR LPRKTHR GLRKVACIGA WHPARVSYTV ARAGQNGYHH RTEMNKKVYK LGKAGQESHA AITDFDRTEK DITPMGGFPH YGV VKDDYL LIKGCCVGPK KRVVTLRQSL LNQTSRVALE EIKLKFIDTS SKFGHGRFQT TQEKQKFYGR LKA

UniProtKB: Large ribosomal subunit protein uL3

+
Macromolecule #77: uL4 (60S ribosomal protein L4)

MacromoleculeName: uL4 (60S ribosomal protein L4) / type: protein_or_peptide / ID: 77 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 44.706887 KDa
SequenceString: MATAAAIPTT TVQSFENDMA TDGAVPLPAV MKAPIRPDVV TYVHSNISKN ARQPYAVSKK AGHQTSAESW GTGRAVSRIP RVAGGGTHR AGQAAFGNMC RGGRMFAPTK IWRRWHRKIP VNQKRYAVAS AIAASAVPSL VLARGHRIES VPELPLVVSD S VESIEKTS ...String:
MATAAAIPTT TVQSFENDMA TDGAVPLPAV MKAPIRPDVV TYVHSNISKN ARQPYAVSKK AGHQTSAESW GTGRAVSRIP RVAGGGTHR AGQAAFGNMC RGGRMFAPTK IWRRWHRKIP VNQKRYAVAS AIAASAVPSL VLARGHRIES VPELPLVVSD S VESIEKTS NAIKALKQIG AYPDAEKAKD SHAIRPGKGK MRNRRYISRK GPLIVYGTEG AKLVKAFRNI PGVEICHVDR LN LLKLAPG GHLGRFIVWT KSAYEKLDGI YGSFDKASEK KKGYVLPRPK MANADLARII NSDEVQSVVR PIKKDVNKRA TLK KNPLKN LNVLLKLNPY AKTARRMSLL AEAQRVKAKK EKLDKKRHQV TKEEASAIRA AGTSWFKTMI SDSDYTEFEN FTKW LGVTQ

UniProtKB: Large ribosomal subunit protein uL4

+
Macromolecule #78: uL5 (60S ribosomal protein L11)

MacromoleculeName: uL5 (60S ribosomal protein L11) / type: protein_or_peptide / ID: 78 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 20.794178 KDa
SequenceString:
MASEKKLSNP MREIKVQKLV LNISVGESGD RLTRAAKVLE QLSGQSPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVK EYELLRRNFS ETGCFGFGIQ EHIDLGIKYD PSTGIYGMDF YVVLERPGYR VARRRRCKAR VGIQHRVTKD D AMKWFQVK YEGVILNKSS NIQ

UniProtKB: 60S ribosomal protein L11-1

+
Macromolecule #79: uL6 (60S ribosomal protein L9)

MacromoleculeName: uL6 (60S ribosomal protein L9) / type: protein_or_peptide / ID: 79 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 22.057648 KDa
SequenceString: MKTILSSETM DIPDGVNIKV KAKQIEVEGP RGKLTRNFKH LNLDFQLIKD EETGKKKLKI DAWFGSRKTT AAIRTALSHV ENLITGVTK GYRYKMRFVY AHFPINASIS GGNKAIEIRN FLGEKRVRKV DMLEGVTVVR SEKVKDELVL DGNDIELVSR S AALINQKC ...String:
MKTILSSETM DIPDGVNIKV KAKQIEVEGP RGKLTRNFKH LNLDFQLIKD EETGKKKLKI DAWFGSRKTT AAIRTALSHV ENLITGVTK GYRYKMRFVY AHFPINASIS GGNKAIEIRN FLGEKRVRKV DMLEGVTVVR SEKVKDELVL DGNDIELVSR S AALINQKC HVKNKDIRKF LDGIYVSEKG RIVEEE

UniProtKB: Large ribosomal subunit protein uL6z/uL6y

+
Macromolecule #80: nascent chain

MacromoleculeName: nascent chain / type: protein_or_peptide / ID: 80 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 2.060531 KDa
SequenceString:
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)

+
Macromolecule #3: 18S rRNA

MacromoleculeName: 18S rRNA / type: rna / ID: 3 / Number of copies: 1
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 583.622188 KDa
SequenceString: UACCUGGUUG AUCCUGCCAG UAGUCAU(A2M)UG CUUGUCU(OMC)AA AGAUUAAGCC AUGCAUGUGU AAGUAUGAAC AA AUUCAGA CUGUGAAACU GCGAA(PSU)GGCU CAU(PSU)AAAUCA GUUAUAGUUU G(PSU)U(OMU)GAUGGU AUCUACU AC U(OMC) ...String:
UACCUGGUUG AUCCUGCCAG UAGUCAU(A2M)UG CUUGUCU(OMC)AA AGAUUAAGCC AUGCAUGUGU AAGUAUGAAC AA AUUCAGA CUGUGAAACU GCGAA(PSU)GGCU CAU(PSU)AAAUCA GUUAUAGUUU G(PSU)U(OMU)GAUGGU AUCUACU AC U(OMC)GGAUAACC GUAGUAAUUC UAG(A2M)GCUAAU ACGUGCAACA AACCCCGACU UCUGGAAGGG AUGCAUUUAU UAGAUAAAA GGUCGACGCG GGCUCUGCCC GUUGCUGC(OMG)A UGAUUCAUGA (PSU)AACUCGACG GAUCGCACGG CCA UCGUGC CGGCGACGCA UCAUUCAAA(PSU) UUC(PSU)GCCCUA UCAACUUUCG AUGGUAGGAU AG(PSU)GGCCUAC CA UGGUGGU GACGGG(PSU)GAC GGAGAAU(OMU)AG GGUUCGAUUC CGGAGA(OMG)GGA GCCUGAGAAA CGGCUACCAC A (PSU)(OMC)CAAGG(A2M) AGGCAGCAGG CGCGC(A2M)AAUU ACCCAA(PSU)CCU GACACGGGGA GGU(A2M)G (PSU)GA(OMC) AAUAAAUAAC AAUACCGGGC UCUAUGAGUC UGGUAAUUGG AAUGAGUACA AUCUAAAUCC CUUAACGA G G(A2M)UCCAUUGG AGGGCAAGUC UGGUGCCAGC AGCCGCGG(OMU)A A(PSU)UCCAGCUC CAAUA(OMG)CGUA (UY1)A(PSU)(PSU)(PSU)AAGU UG(OMU)UGCAGUU (A2M)AAAAGCUCG UAG(PSU)UGGACU UUGGGAUGGG CCG GCCGGU CCGCCUUAGG UGUGCACCGG UCGUCUCGUC CCUUCUGCCG GCGAUGCGCU CCUGGCCUUA AUUGGCCGGG UCGU GCCUC CGGCGCUGUU ACU(PSU)UGAAGA AA(PSU)(PSU)AGAGUG CUCAAAGCAA GCCUACGCUC UGUAUACAUU (A2M)GCAUGGGA (PSU)AACAUUAUA GGAUUUCGGU CCUAUUACGU UGGCCUUCGG GAUCGGAGUA AUGAUUAACA GGG ACAGUC GGGGGCAU(OMU)C GUAUUUCAUA GUCAGAGGUG AAAUUCUUGG AUUUAUGAAA GACGAACAAC UGCGAAAGCA UU(PSU)GCCAAG GAUG(PSU)UUUCA UUAAUCAAGA (A2M)CGAAAGUUG GGGGCUCGAA GACGA(PSU)CAGA UACCG (OMU)CCU AGUCUCAACC A(PSU)AAACGAUG CCGACCAGGG AUCGGCGGAU GUUGCUUUUA GGACUCCGCC GGCACCUU A UGAGAAAUCA AAGUUUUUGG G(PSU)UCCGGGGG GAGUA(PSU)GGUC GCAAGGCUGA AACUUAAAGG AAUUGACGGA A GGGCACCA CCAGGAGUGG AGCC(PSU)GCGGC (PSU)UAAUU(PSU)GAC (B8N)CAACACGGG GAAACU(PSU)ACC AG G(PSU)(OMC)CAGA CAUAGUAAGG A(OMU)UGACAGAC UGAGAGCUCU UUCUUGAUUC UAUGGGUGG(OMU) G(OMG)U GCAUGG C(4AC)GUUCUUAG U(PSU)GGUGGAGC GA(PSU)UUG(PSU)CUG GUUAAUUCCG UUAACGA(A2M)CG AGAC CUCAG CCUGCUAACU AGCUAUGCGG AGGUAUCCCU UCGCGGCCAG CU(OMU)CUUAGAG GGACUACGGC CUUUUAGGCC G CGGAAGUU UGAGGCAAUA ACA(OMG)GUCUGU GAUGCCC(OMU)UA GAUGUUCUGG GCCGCACGCG CGCUACACUG AUGU A(PSU)UCA ACGAGUUUAU AGCCUUGGCC GACAGGCCCG GGUAA(PSU)CUUU GAAAUU(PSU)CAU CGUGAUGGGG AUA GAUCAU UGCAAUUGU(PSU) GGUCUUCAAC G(A2M)GGAAUUCC UAGUAAGCGC GAGUCAUCAG CUCGCGU(PSU)GA CU ACGUCCC UGCCCUU(PSU)GU ACACACCG(OMC)C CGUCGCUCCU ACCGAUUGAA UGAUCCGGUG AAAUGUUCGG AUCGC GGCG ACGUGGGCGG UUCGCUGCCC GCGACGUCGC GAGAAGUCCA UUGAACCUUA UCAUUUAGAG GA(A2M)GGAGAAG UC GUA(6MZ)CAA GGUUUC(4AC)GUA GG(PSU)G(MA6)(MA6)CCUG CGGAAGGAUC AUUG

+
Macromolecule #35: mRNA

MacromoleculeName: mRNA / type: rna / ID: 35 / Number of copies: 1
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 3.629032 KDa
SequenceString:
UUUUUUUUUU UU

+
Macromolecule #36: tRNA

MacromoleculeName: tRNA / type: rna / ID: 36 / Number of copies: 2
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 24.571643 KDa
SequenceString:
GCGGGGAUAG CUCAGUUGGG AGAGCGUCAG ACUGAAGAUC UGAAGGUCGC GUGUUCGAUC CACGCUCACC GCACCA

GENBANK: GENBANK: X02683.1

+
Macromolecule #37: 5S rRNA

MacromoleculeName: 5S rRNA / type: rna / ID: 37 / Number of copies: 1
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 38.328777 KDa
SequenceString:
GGAUGCGAUC AUACCAGCAC UAACGCACCG GAUCCCAUCA GAACUCCGAA GUUAAGCGUG CUUGGGCGAG AGUAGUACUA GGAUGGGUG ACCCCCUGGG AAGUCCUCGU GUUGCAUCCC

GENBANK: GENBANK: XR_007441763.1

+
Macromolecule #81: 25S rRNA

MacromoleculeName: 25S rRNA / type: rna / ID: 81 / Number of copies: 1
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 1.098268 MDa
SequenceString: GCGACCCCAG GUCAGGCGGG ACUACCCGCU GAG(PSU)UUAAG(OMC) A(PSU)A(OMU)CAA(OMU)AA GCGGAGGAAA AGAAACUUA CAAGGAUUCC CCUAGUAACG GCGAGCGAAC CGGGAACAGC CCAGCCUUAG AAUCGGGCGG CUCCGCCGUU C GAA(OMU)UGUA ...String:
GCGACCCCAG GUCAGGCGGG ACUACCCGCU GAG(PSU)UUAAG(OMC) A(PSU)A(OMU)CAA(OMU)AA GCGGAGGAAA AGAAACUUA CAAGGAUUCC CCUAGUAACG GCGAGCGAAC CGGGAACAGC CCAGCCUUAG AAUCGGGCGG CUCCGCCGUU C GAA(OMU)UGUA G(PSU)CUGGAGAA GCGUCCUCAG CGGCGGACCG GGCCCAAGUC CCCUGGAAGG GGGCGCCAGA GAGG GUGAG AGCCCCGUUG (PSU)GCCCGGACC CUGUCGCACC ACGAGGCGCU GUCUACGAGU CGGGUUGUU(PSU) GGGAAUG CA GCCCAAAUC(OMG) GGCGGUGAAU UCCG(PSU)CCAAG GCUAAAUACG GGCGAGAGAC CGAUAGCGAA CAAGUACCGC GAGGGAAAG AUG(A2M)AAAGGA CUUUGAAAAG AGAGUCAAAG AGU(OMG)CUUGAA AUUGUCGGGA GGGAAGCGGA UGG GGGCCG GCGAUGCGCC CCGGUCGGAU GUGGAACGG(PSU) GACGAGCCGG UCCGCCGAUC GACUCGGGGC GUGGACCAGC GUGGA(PSU)UGG GGGGGCGGCC AAAGCCCGGG CUUUCGAUAC GCCCGUGGAA CGCCGUCUCC UUGAUUGUGG UAGGCAG CG CGCGCCUCCG GCGUGCUUCG GCAUCUGCGC GCUCCGGACG CUGGCCUGUG GGCUCCCCAU UCGACCCGUC UUG(1MA) AAC(A2M)C GGACCAAGGA GU(OMC)(OMU)GACAUG UG(PSU)GCGAGUC AACGGGCGAG UAAACCCGUA AGGCG (PSU)AAG GAAGCUGAUU GGUGGGAUCC CCCUGAGGGG UGCACCGCCG ACCGACCUUG AUCUUCUGUG AAGGG(PSU) (OMU)CG AGUGUGAGCA UACC(OMU)GUCGG GACCC(OMG)A(A2M)AG AUGGUGA(A2M)C(PSU) AUGCCUGAGC GGG GCGAAG CCAGAGGAAA CUCUGGUGGA GGCCCGCAGC GAUACUG(A2M)CG UGCAAA(PSU)CGU UCG(PSU)CUGACU UG GGUAUAG (OMG)GGCGAAAGA CUAAUCGAAC CGUCUAGU(A2M)G CUGGUUCCCU CCGAAGUU(PSU)C CC(PSU)CAGG A(PSU) AGCUGGAGCU CGCGUGCGAG UUCUA(PSU)CGGG UAAAGCCAA(PSU) GAUUAGAGGC AUCGGGGGCG CAACGC CCU CGACCUAUUC (PSU)CAAACUU(PSU)A AA(OMU)AGGUAGG ACGGUGCGGC UGCUUUGUUG AGCCGCACCA CGGAA UCAA GAGCUCCAAG UGGGCCAU(PSU)(PSU) (PSU)UGGUAAGC(A2M) GAACUGGCGA UGCGGGAUGA ACCGGAAGCC GGGUUACGG UGCCAAACUG CGCGCUAACC UAGAUCCCAC AAAGGGUGUU GGUCGAUUAA GACAGCAGGA CGGUGGUCAU G GAAGUCGA AAUCCGCUAA GGAGUGUGUA ACAACUCACC UGCCGAAUCA ACUAGCCCCG AAAAUGGAUG GCGCUUAAGC GC GCGACCU ACACCCGGCC GUCGGGGCAA GUGCCAGGCC CCGAUG(A2M)GUA GGAGGGCGCG GCGGUCGCUG CAAAACCUU GGGCGCGAGC CUGGGCGGAG CGGCCGUCGG UGCAGAU(OMC)UU GGUGGUAGU(A2M) (OMG)CAAAUAUUC AAA(PSU) GAGAA (OMC)U(PSU)UGAAGGC CGAAGAGGGG AAAGGUUCCA UGUGAACGGC ACUUGCACAU GGGUUAG(OMU)CG AUC CUAAGG GUCGGGGGAA CCCCGACAGA UAGCGCGUUU CGCGCGUACU CCGAAAGGGA AUCGGGUUAA AAUUCCUGAA CCGG GACGU GGCGGUUGAC GGCAACGUUA GGAAGUCCGG AGACGUCGGC GGGGGCCUCG GGAAGAG(PSU)UA UCUUUUCUGU U UAACAGCC UGCCCACCCU GGAAACGACU CAGUCGGAGG UAGGGUCCAG CGGCUGGAAG AGCACCGCAC GUCGCGUGGU GU CCGGUGC GCCCCCGGCG GCCCUUGAAA AUCCGGAGGA CCGAGUGCCG UCCACGCCCG GUCGUACUCA UAA(OMC)CG (OMC)AU CA(OMG)GUCU(OMC)CA AGGUGAACAG CCUCUGGUCG AUGGAACAA(OMU) GUAGGCAAGG GAAGUCGGCA A AAUGGAUC CGUAACUUCG GGAAAAGGAU UGGCUCUGAG GGCUGGGCAC GGGGGUCCCA GUCCCGAACC CGUCGGCUGU CG GUGGACU GCUCGAGCUG CUCCCGCGGC GAGAGCGGGU CGCCGCGUGC CGGCCGGGGG ACGGACUGGG AACGGUUCCU UCG GGGGCC UUCCCCGGGC GUCGAACAGC CAACUCAGAA CUGGUACGGA CAAG(OMG)(OMG)G(A2M)AU CCGAC(PSU)G (PSU)U UAAUUAAAAC AAAGCAUUGC GAUGGUCCCU GCGGAUGUUU ACGCAAUGUG AUU(PSU)CUGCC(OMC) AGUGCU CUG AAUG(PSU)CAAAG UGA(A2M)GAAAUU CAACCAAGC(OMG) CGGGUAAACG GCGGGAG(PSU)A(A2M) C(PSU)A (PSU)GAC(PSU)C (PSU)CUUAAGGUA GC(5MC)AA(A2M)UGCC UC(OMG)UCAU(OMC)UA AUUAGUGACG CGCAUG AA(PSU) GGA(PSU)UA(A2M)CGA G(A2M)UUCCCACU GU(OMC)CCUGUCU AC(OMU)AUCCAGC GAAACCACAG (OMC)CAAGGGAA CGGGCUUGGC AGAAUCA(OMG)CG G(OMG)GAAAGAAG ACCCU(OMG)(OMU)UGA GC(PSU)UGAC (OMU)C UAGUCCGAC(PSU) UUGUGAAAUG ACUUGAGAGG UGUAGUAUAA GUGGGAGCCG AAAGGCGAAA GUGAAAUACC ACUACUUUU AACGUUAUUU UACUUAUUCC GUGAAUCGGA AGCGGGGCAC UGCCCCUCUU UUUGGACCCA AGGCUUGCUU G CAGGCCGA UCCGGGCGGA AGACAUUGUC AGGUGGGGAG UUUGGCUG(OMG)G GCGGCACAUC UGUUAAAAG(A2M) UAAC GCAGG (UY1)(OMG)UCCUAAGA UGAGCUCAAC GAGAACAGAA AU(OMC)UCGUGUG GAACAGAAGG GUAAAAGCUC GUU UGAU(OMU)C UGAUUUCCAG (OMU)ACGAA(OMU)ACG AACCG(PSU)GAAA GCGUGGCCUA ACGAUCCUUU AGACCUUC G GAAUUCGAAG CUA(OMG)A(OMG)GUGU CAG(A2M)AAAGUU ACCACAG(OMG)GA UAACUGGC(PSU)U GUGGCAGC (OMC) AAGCGUUCAU AGCGACG(PSU)UG CUUUUUGA(PSU)C CUU(5MC)GAUGUC GG(OMC)(PSU)CU(OMU)CCU A UCAUUG(PSU)G AAGCAGAAUU CACCA(A2M)GUGU U(OMG)GAU(OMU)(OMG)(PSU)UC ACCCACCAAU AGGGAACG (PSU) G(A2M)G(OMC)UGGG(UR3)U (PSU)AGA(OMC)CGUCG UGAGACAGGU (PSU)AGUUUUACC CUACUGAUGA C AGUGUCGC AAUAGUAAUU CAACCUAGUA CGAGAGGAAC CGUUGAUUCG CACAAUUGGU CAUCGCGCUU GGUUGAAAAG CC AGUGGCG CGAAGCUACC GUGCGCUGGA UUAUGAC(PSU)GA ACGCCUCUAA GUCAGAAUCC GGGCUAGAAG CGACGCAUG CGCCCGCCGU CCGCUUGCCG ACCCGCAGUA GGGGCCUUUG GCCCCCAAGG GCACGUGUCG UUGGCUAAGU CAUCGUGGCG GAAGAGCCG CGGUGGCCGC CUUGAAGUAC AAUUUCCAUC GAGCGGCGGG UAGAA(OMU)CCUU UGCAGACGAC (OMU)UA AAUACG CGACGGGGUA UUGUAAGUGG CAGAGUGGCC UUGCUGCCAC GAUCCACUGA GAUUCAGCCC UUUGUCGCUC CGAU UCGU

+
Macromolecule #82: 5.8S rRNA

MacromoleculeName: 5.8S rRNA / type: rna / ID: 82 / Number of copies: 1
Source (natural)Organism: Nicotiana tabacum (common tobacco)
Molecular weightTheoretical: 52.563258 KDa
SequenceString:
AAACGACUCU CGGCAACGGA (PSU)AUCUCGGCU CUCGCAUCGA UGAAG(A2M)ACGU AGCGAAAUGC GAUACUUGGU GU GAAU(PSU)(OMG)C AGAAUUCCGU GAACCA(PSU)CGA GUCUUUGAAC GCAAGUUGCG CCCGAAGCCA UUAGGCCGAG G GCACGUCU GCCUGGGCGU CACGC

GENBANK: GENBANK: MN809315.1

+
Macromolecule #83: MAGNESIUM ION

MacromoleculeName: MAGNESIUM ION / type: ligand / ID: 83 / Number of copies: 135 / Formula: MG
Molecular weightTheoretical: 24.305 Da

+
Macromolecule #84: POTASSIUM ION

MacromoleculeName: POTASSIUM ION / type: ligand / ID: 84 / Number of copies: 141 / Formula: K
Molecular weightTheoretical: 39.098 Da

+
Macromolecule #85: SPERMIDINE

MacromoleculeName: SPERMIDINE / type: ligand / ID: 85 / Number of copies: 2 / Formula: SPD
Molecular weightTheoretical: 145.246 Da
Chemical component information

ChemComp-SPD:
SPERMIDINE

+
Macromolecule #86: SPERMINE

MacromoleculeName: SPERMINE / type: ligand / ID: 86 / Number of copies: 5 / Formula: SPM
Molecular weightTheoretical: 202.34 Da
Chemical component information

ChemComp-SPM:
SPERMINE

+
Macromolecule #87: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 87 / Number of copies: 7 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

+
Macromolecule #88: water

MacromoleculeName: water / type: ligand / ID: 88 / Number of copies: 6792 / Formula: HOH
Molecular weightTheoretical: 18.015 Da
Chemical component information

ChemComp-HOH:
WATER

-
Experimental details

-
Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

-
Sample preparation

BufferpH: 8
VitrificationCryogen name: ETHANE

-
Electron microscopy

MicroscopeFEI TITAN KRIOS
Image recordingFilm or detector model: GATAN K3 (6k x 4k) / Average electron dose: 27.0 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: OTHER / Imaging mode: OTHER / Nominal defocus max: 2.5 µm / Nominal defocus min: 1.0 µm
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

+
Image processing

CTF correctionType: NONE
Startup modelType of model: OTHER
Final reconstructionResolution.type: BY AUTHOR / Resolution: 2.2 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 335291
Initial angle assignmentType: NOT APPLICABLE
Final angle assignmentType: OTHER
FSC plot (resolution estimation)

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more