[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 20 items for (author: skrajna & a)

EMDB-72476:
His-tagged Glutamine Synthetase on a Ni-NTA lipid monolayer grid
Method: single particle / : Baker RW, Strauss JD

PDB-9y4a:
His-tagged Glutamine Synthetase on a Ni-NTA lipid monolayer grid
Method: single particle / : Baker RW, Strauss JD

EMDB-72471:
His-tagged beta galactosidase (LacZ) on a Ni-NTA lipid monolayer grid
Method: single particle / : Baker RW, Strauss JD

PDB-9y45:
His-tagged beta galactosidase (LacZ) on a Ni-NTA lipid monolayer grid
Method: single particle / : Baker RW, Strauss JD

EMDB-72472:
Human nucleosome structure on Nickel-NTA lipid affinity grid (C2 refinement)
Method: single particle / : Baker RW, Strauss JD, McGinty RK, Skrajna A

EMDB-72473:
Human nucleosome structure on Nickel-NTA lipid affinity grid (C1 refinement)
Method: single particle / : Baker RW, Strauss JD, McGinty RK, Skrajna A

EMDB-72474:
Sro7 bound to His-Exo84 (1-326) on a Nickel-NTA lipid monolayer
Method: single particle / : Baker RW, Strauss JD, McGinty RK

PDB-9y46:
Human nucleosome structure on Nickel-NTA lipid affinity grid (C2 refinement)
Method: single particle / : Baker RW, Strauss JD, McGinty RK, Skrajna A

PDB-9y47:
Human nucleosome structure on Nickel-NTA lipid affinity grid (C1 refinement)
Method: single particle / : Baker RW, Strauss JD, McGinty RK, Skrajna A

PDB-9y48:
Sro7 bound to His-Exo84 (1-326) on a Nickel-NTA lipid monolayer
Method: single particle / : Baker RW, Strauss JD

EMDB-48928:
Cryo-EM map of APC/C-CDC20-UBE2C-H2A/H2B crosslinked complex
Method: single particle / : Skrajna A, Bordrug T, Brown NG, McGinty RK

EMDB-48984:
Cryo-EM map of APC/C-CDC20-UBE2C-H3/H4 crosslinked complex
Method: single particle / : Skrajna A, Bordrug T, Brown NG, McGinty RK

PDB-9n9r:
Model of APC/C-CDC20-UBE2C from H2A/H2B-bound complex
Method: single particle / : Skrajna A, Bodrug T, Brown NG, McGinty RK

PDB-9n9s:
Model of APC/C-CDC20-UBE2C from H3/H4-bound complex
Method: single particle / : Skrajna A, Bodrug T, Brown NG, McGinty RK

EMDB-26809:
KDM2A-nucleosome structure stabilized by H3K36C-UNC8015 covalent conjugate
Method: single particle / : Spangler CJ, Skrajna A, Foley CA, Budziszewski GR, Azzam DN, James LI, Frye SV, McGinty RK

EMDB-26810:
KDM2B-nucleosome complex stabilized by H3K36C-UNC8015 covalent conjugate
Method: single particle / : Spangler CJ, Skrajna A, Foley CA, Budziszewski GR, Azzam DN, James LI, Frye SV, McGinty RK

PDB-7uv9:
KDM2A-nucleosome structure stabilized by H3K36C-UNC8015 covalent conjugate
Method: single particle / : Spangler CJ, Skrajna A, Foley CA, Budziszewski GR, Azzam DN, James LI, Frye SV, McGinty RK

EMDB-25777:
Structure of VRK1 C-terminal tail bound to nucleosome core particle
Method: single particle / : Spangler CJ, Budziszewski GR

EMDB-25778:
Uncrosslinked VRK1-nucleosome complex
Method: single particle / : Spangler CJ, Budziszewski GR, McGinty RK

PDB-7tan:
Structure of VRK1 C-terminal tail bound to nucleosome core particle
Method: single particle / : Spangler CJ, Budziszewski GR, McGinty RK

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more