[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 42 items for (author: singh & ps)

EMDB-43306:
cryo-EM structure of a non-neutralizing antibody V3-21 in complex with SARS-CoV-2 spike

EMDB-43314:
cryo-EM structure of a non-neutralizing antibody V6-12 in complex with SARS-CoV-2 spike

EMDB-43255:
Protective effect of human non-neutralizing cross-reactive spike antibodies elicited by SARS-CoV-2 mRNA vaccination

PDB-8via:
Protective effect of human non-neutralizing cross-reactive spike antibodies elicited by SARS-CoV-2 mRNA vaccination

EMDB-41110:
Automethylated PRC2 dimer bound to nucleosome

EMDB-41141:
PRC2 monomer bound to nucleosome

EMDB-41146:
PRC2-J119-450 monomer bound to H1-nucleosome

EMDB-41147:
H1-nucleosome (chromatosome)

PDB-8t9g:
Automethylated PRC2 dimer bound to nucleosome

PDB-8tas:
PRC2 monomer bound to nucleosome

PDB-8tb9:
PRC2-J119-450 monomer bound to H1-nucleosome

EMDB-29424:
CryoEM strucutre of 22-mer RBM2 of the Salmonella MS-ring

EMDB-29425:
CryoEM map of 33-mer RBM3 of the Salmonella MS-ring

EMDB-29427:
CryoEM map of 32-mer RBM3 of the Salmonella MS-ring

EMDB-29429:
CryoEM map of 34-mer RBM3 of the Salmonella MS-ring

EMDB-29437:
CryoEM map of 21-mer RBM2 of the Salmonella MS-ring

EMDB-29441:
C11 symmetry applied MS-ring

EMDB-33331:
Cyo-EM model for native cystathionine beta-synthase of Mycobacterium tuberculosis.

EMDB-33348:
Cryo-EM map of cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine.

EMDB-33363:
Cryo-EM map of cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine and serine.

PDB-7xnz:
Native cystathionine beta-synthase of Mycobacterium tuberculosis.

PDB-7xoh:
Cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine.

PDB-7xoy:
Cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine and serine.

EMDB-24663:
Cryo-EM density map of the outer dynein arm core from bovine tracheal cilia

EMDB-24664:
Composite cryo-EM density map of the 48-nm repeat doublet microtubule from bovine tracheal cilia

PDB-7rro:
Structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia

EMDB-10677:
in-cell 70S ribosome from Mycoplasma pneumoniae

EMDB-10678:
in-cell elongating expressome from Mycoplasma pneumoniae with focused refinement on RNAP

EMDB-10679:
in-cell elongating expressome from Mycoplasma pneumoniae

EMDB-10680:
Multibody refinement of RNA polymerase-NusA body of Mycoplasma pneumoniae in-cell expressome

EMDB-10681:
Multibody refinement of 30S ribosome body of Mycoplasma pneumoniae in-cell expressome

EMDB-10682:
Multibody refinement of 50S ribosome body of Mycoplasma pneumoniae in-cell expressome

EMDB-10683:
70S ribosome from chloramphenicol-treated Mycoplasma pneumoniae cells

EMDB-10684:
in-cell stalled expressome from pseudouridimycin-treated Mycoplasma pneumoniae

EMDB-10685:
Multibody refinement of RNA polymerase body of pseudouridimycin-stalled Mycoplasma pneumoniae in-cell expressome

EMDB-10686:
Multibody refinement of 30S ribosome body of pseudouridimycin-stalled Mycoplasma pneumoniae in-cell expressome

EMDB-10687:
Multibody refinement of 50S ribosome body of pseudouridimycin-stalled Mycoplasma pneumoniae in-cell expressome

EMDB-3506:
cryoEM structure of bacterial holo-translocon

PDB-5mg3:
EM fitted model of bacterial holo-translocon

EMDB-3331:
Structure of a Group II Intron Complexed with its Reverse Transcriptase

EMDB-3332:
Structure of a Group II Intron Complexed with its Reverse Transcriptase

EMDB-3333:
Structure of a Group II Intron Complexed with its Reverse Transcriptase

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more