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Showing all 30 items for (author: shaikh & tr)
![](data/emdb/media/17015/emdbimg.jpg)
EMDB-17015:
Cryo-EM map of the focused refinement of the subfamily III haloalkane dehalogenase from Haloferax mediterranei dimer forming hexameric assembly.
Method: single particle / : Polak M, Novacek J, Chmelova K, Marek M
![](data/pdb/img/8ooh.jpg)
PDB-8ooh:
Cryo-EM map of the focused refinement of the subfamily III haloalkane dehalogenase from Haloferax mediterranei dimer forming hexameric assembly.
Method: single particle / : Polak M, Novacek J, Chmelova K, Marek M
![](data/emdb/media/16998/emdbimg.jpg)
EMDB-16998:
Cryo-EM structure of subfamily III haloalkane dehalogenase DhmeA from Haloferax mediterranei
Method: single particle / : Marek M, Novacek J, Polak M, Chmelova K
![](data/emdb/media/12273/snaps2.jpg)
EMDB-12273:
Cryo-EM structure of the human FERRY complex
Method: single particle / : Quentin D, Klink BU, Raunser S
![](data/emdb/media/13969/snaps2.jpg)
EMDB-13969:
Active state of GluA1/2 in complex with TARP gamma 8, L-glutamate and CTZ
Method: single particle / : Herguedas B, Kohegyi B, Zhang D, Greger IH
![](data/emdb/media/13970/snaps2.jpg)
EMDB-13970:
Active state of GluA1/A2 AMPA receptor in complex with TARP gamma-8 (TMD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH
![](data/emdb/media/13971/snaps2.jpg)
EMDB-13971:
Active state of GluA1/A2 AMPA receptor in complex with TARP gamma-8 (LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH
![](data/emdb/media/13972/snaps2.jpg)
EMDB-13972:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (TMD-LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh S, Lape R, Krieger JM, Greger IH
![](data/emdb/media/13973/snaps2.jpg)
EMDB-13973:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (TMD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH
![](data/emdb/media/13974/snaps2.jpg)
EMDB-13974:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh SH, Lape R, Krieger JM, Greger IH
![](data/pdb/media/7qhb/snapsdep.jpg)
PDB-7qhb:
Active state of GluA1/2 in complex with TARP gamma 8, L-glutamate and CTZ
Method: single particle / : Herguedas B, Kohegyi B, Zhang D, Greger IH
![](data/pdb/media/7qhh/snapsdep.jpg)
PDB-7qhh:
Desensitized state of GluA1/2 AMPA receptor in complex with TARP-gamma 8 (TMD-LBD)
Method: single particle / : Herguedas B, Kohegyi B, Dohrke JN, Watson JF, Zhang D, Ho H, Shaikh S, Lape R, Krieger JM, Greger IH
![](data/emdb/media/2970/snaps2.jpg)
EMDB-2970:
Cryo-EM structure of E. coli 70S ribosome bound to additional non-ribosomal proteins.
Method: single particle / : Shasmal M, Dey S, Shaikh TR, Bhakta S, Sengupta J
![](data/emdb/media/2972/snaps2.jpg)
EMDB-2972:
Cryo-EM structure of E. coli 70S ribosome bound to additional non-ribosomal proteins.
Method: single particle / : Shasmal M, Dey S, Shaikh TR, Bhakta S, Sengupta J
![](data/pdb/media/5flx/snapsdep.jpg)
PDB-5flx:
Mammalian 40S HCV-IRES complex
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
![](data/emdb/media/3221/snaps2.jpg)
EMDB-3221:
Mammalian 80S HCV-IRES complex, Classical
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
![](data/emdb/media/3223/snaps2.jpg)
EMDB-3223:
Mammalian 80S HCV-IRES complex, Classical / no head tilt
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
![](data/emdb/media/3224/snaps2.jpg)
EMDB-3224:
Mammalian 40S HCV-IRES complex
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
![](data/emdb/media/3225/snaps2.jpg)
EMDB-3225:
Mammalian 80S HCV-IRES complex, Rolled
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
![](data/emdb/media/3226/snaps2.jpg)
EMDB-3226:
Mammalian 80S HCV-IRES complex, Rotated
Method: single particle / : Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
![](data/pdb/media/4v69/snapsdep.jpg)
PDB-4v69:
Ternary complex-bound E.coli 70S ribosome.
Method: single particle / : Villa E, Sengupta J, Trabuco LG, LeBarron J, Baxter WT, Shaikh TR, Grassucci RA, Nissen P, Ehrenberg M, Schulten K, Frank J
![](data/emdb/media/1915/snaps2.jpg)
EMDB-1915:
Initial binding position of RRF on the post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK
![](data/emdb/media/1916/snaps2.jpg)
EMDB-1916:
Initial binding conformation of RRF on the post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK
![](data/emdb/media/1917/snaps2.jpg)
EMDB-1917:
Intermediate binding positions of RRF and EF-G on the post-termination complex
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK
![](data/emdb/media/1918/snaps2.jpg)
EMDB-1918:
Binding conformations and positions of RRF and EF-G during intermediate state of ribosome recycling
Method: single particle / : Yokoyama T, Shaikh TR, Iwakura N, Kaji H, Kaji A, Agrawal RK
![](data/emdb/media/5036/snaps2.jpg)
EMDB-5036:
Aminoacyl-tRNA-EF-Tu-GDP-kir ternary complex-bound E. coli 70S ribosome
Method: single particle / : Villa E, Sengupta J, Trabuco LG, LeBarron J, Baxter WT, Shaikh TR, Grassucci RA, Nissen P, Ehrenberg M, Schulten K, Frank J
![](data/emdb/media/1143/snaps2.jpg)
EMDB-1143:
Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Method: single particle / : Mitra K, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J
![](data/pdb/media/2akh/snapssp2.jpg)
PDB-2akh:
Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Method: single particle / : Mitra KM, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J
![](data/pdb/media/2aki/snapssp2.jpg)
PDB-2aki:
Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Method: single particle / : Mitra K, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J
![](data/emdb/media/1132/snaps2.jpg)
EMDB-1132:
A partial atomic structure for the flagellar hook of Salmonella typhimurium.
Method: helical / : Shaikh TR, Thomas DR, Chen JZ, Samatey FA, Matsunami H, Imada K, Namba K, DeRosier DJ