[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 106 items for (author: ryu & b)

EMDB-37712:
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Method: single particle / : Lee J, Ryu B, Kim T, Kim KK

EMDB-37713:
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Method: single particle / : Lee J, Ryu B, Kim T, Kim KK

PDB-8wp9:
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Method: single particle / : Lee J, Ryu B, Kim T, Kim KK

EMDB-42149:
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
Method: single particle / : Finney J, Kong S, Walsh Jr RM, Harrison SC, Kelsoe G

PDB-8udg:
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
Method: single particle / : Finney J, Kong S, Walsh Jr RM, Harrison SC, Kelsoe G

EMDB-33274:
Human Cx36/GJD2 (N-terminal deletion mutant) gap junction channel in soybean lipids (D6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

PDB-7xl8:
Human Cx36/GJD2 (N-terminal deletion mutant) gap junction channel in soybean lipids (D6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-36220:
Cryo-EM structure of Na+,K+-ATPase in the E1.Mg2+ state.
Method: single particle / : Kanai R, Vilsen B, Cornelius F, Toyoshima C

PDB-8jfz:
Cryo-EM structure of Na+,K+-ATPase in the E1.Mg2+ state.
Method: single particle / : Kanai R, Vilsen B, Cornelius F, Toyoshima C

EMDB-33275:
Human Cx36/GJD2 (N-terminal deletion mutant) gap junction channel in soybean lipids (C1 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-33326:
Human Cx36/GJD2 gap junction channel with pore-lining N-terminal helices in the presence of Magnesium
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-33256:
Human Cx36/GJD2 gap junction channel in detergents
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

PDB-7xkk:
Human Cx36/GJD2 gap junction channel in detergents
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-33254:
Human Cx36/GJD2 (N-terminal deletion BRIL-fused mutant) gap junction channel in soybean lipids (D6 symmetry)
Method: single particle / : Cho HJ, Lee SN, Jeong H, Ryu B, Lee HJ, Woo JS, Lee HH

EMDB-33255:
Human Cx36/GJD2 (N-terminal deletion BRIL-fused mutant) gap junction channel in soybean lipids (C1 symmetry)
Method: single particle / : Cho HJ, Lee SN, Jeong H, Ryu B, Lee HJ, Woo JS, Lee HH

EMDB-33270:
Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in detergents at 2.2 Angstroms resolution
Method: single particle / : Cho HJ, Lee SN, Jeong H, Ryu B, Lee HJ, Woo JS, Lee HH

EMDB-33315:
Human Cx36/GJD2 gap junction channel with pore-lining N-terminal helices in soybean lipids
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-33327:
Structurally hetero-junctional human Cx36/GJD2 gap junction channel in soybean lipids (C6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-33328:
Structurally hetero-junctional human Cx36/GJD2 gap junction channel in soybean lipids (C1 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-34822:
Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in soybean lipids
Method: single particle / : Cho HJ, Lee SN, Jeong H, Ryu B, Lee HJ, Woo JS, Lee HH

EMDB-34856:
Structurally hetero-junctional human Cx36/GJD2 gap junction channel in detergents (C6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-34857:
Structurally hetero-junctional human Cx36/GJD2 gap junction channel in detergents (C1 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

PDB-7xki:
Human Cx36/GJD2 (N-terminal deletion BRIL-fused mutant) gap junction channel in soybean lipids (D6 symmetry)
Method: single particle / : Cho HJ, Lee SN, Jeong H, Ryu B, Lee HJ, Woo JS, Lee HH

PDB-7xkt:
Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in detergents at 2.2 Angstroms resolution
Method: single particle / : Cho HJ, Lee SN, Jeong H, Ryu B, Lee HJ, Woo JS, Lee HH

PDB-7xnh:
Human Cx36/GJD2 gap junction channel with pore-lining N-terminal helices in soybean lipids
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

PDB-7xnv:
Structurally hetero-junctional human Cx36/GJD2 gap junction channel in soybean lipids (C6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

PDB-8hkp:
Structurally hetero-junctional human Cx36/GJD2 gap junction channel in detergents (C6 symmetry)
Method: single particle / : Lee SN, Cho HJ, Jeong H, Ryu B, Lee HJ, Lee HH, Woo JS

EMDB-32892:
Native Photosystem I of Chlamydomonas reinhardtii
Method: single particle / : Kurisu G, Gerle C, Mitsuoka K, Kawamoto A, Tanaka H

EMDB-32907:
PSI-LHCI from Chlamydomonas reinhardtii with bound ferredoxin
Method: single particle / : Kurisu G, Gerle C, Mitsuoka K, Kawamoto A, Tanaka H

PDB-7wyi:
Native Photosystem I of Chlamydomonas reinhardtii
Method: single particle / : Kurisu G, Gerle C, Mitsuoka K, Kawamoto A, Tanaka H

PDB-7wzn:
PSI-LHCI from Chlamydomonas reinhardtii with bound ferredoxin
Method: single particle / : Kurisu G, Gerle C, Mitsuoka K, Kawamoto A, Tanaka H

EMDB-33293:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, apo structure with DMSO
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

EMDB-33294:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, the structure complexed with an allosteric inhibitor N4
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

PDB-7xmc:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, apo structure with DMSO
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

PDB-7xmd:
Cryo-EM structure of Cytochrome bo3 from Escherichia coli, the structure complexed with an allosteric inhibitor N4
Method: single particle / : Nishida Y, Shigematsu H, Iwamoto T, Takashima S, Shintani Y

EMDB-14634:
Cryo-EM structure of GMPCPP-microtubules in complex with VASH2-SVBP
Method: single particle / : Choi SR, Blum T, Steinmetz MO

PDB-7zcw:
Cryo-EM structure of GMPCPP-microtubules in complex with VASH2-SVBP
Method: single particle / : Choi SR, Blum T, Steinmetz MO

EMDB-32097:
Inward-facing structure of human EAAT2 in the WAY213613-bound state
Method: single particle / : Kato T, Kusakizako T, Yamashita K, Nishizawa T, Nureki O

EMDB-32098:
Inward-facing structure of human EAAT2 in the substrate-free state
Method: single particle / : Kato T, Kusakizako T, Yamashita K, Nishizawa T, Nureki O

PDB-7vr7:
Inward-facing structure of human EAAT2 in the WAY213613-bound state
Method: single particle / : Kato T, Kusakizako T, Yamashita K, Nishizawa T, Nureki O

PDB-7vr8:
Inward-facing structure of human EAAT2 in the substrate-free state
Method: single particle / : Kato T, Kusakizako T, Yamashita K, Nishizawa T, Nureki O

EMDB-33601:
Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state
Method: single particle / : Kanai R, Cornelius F, Vilsen B, Toyoshima C

EMDB-33602:
Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state after addition of ATP
Method: single particle / : Kanai R, Cornelius F, Vilsen B, Toyoshima C

PDB-7y45:
Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state
Method: single particle / : Kanai R, Cornelius F, Vilsen B, Toyoshima C

PDB-7y46:
Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state after addition of ATP
Method: single particle / : Kanai R, Cornelius F, Vilsen B, Toyoshima C

EMDB-14626:
Human elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

EMDB-14627:
Murine Elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

EMDB-30673:
Activity optimized supercomplex state1
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-30674:
Activity optimized supercomplex state2
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-30675:
Activity optimized supercomplex state3
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more