[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,075 items for (author: ross & d)

EMDB-57520:
Electron tomogram of resin-embedded yeast cells expressing Tcb3(1-272)-GFP-chimeraC, deleted for tcb1/2, scs2/22 and ist2
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-57516:
Electron tomogram of resin-embedded wild type yeast cells expressing Tcb3(1-490)-chimeraC-GFP
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-57517:
Electron tomogram of resin-embedded yeast cells expressing Tcb3(1-490)-chimeraC-GFP, deleted for tcb1/2
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-57518:
Electron tomogram of resin-embedded yeast cells expressing Tcb3(1-490)-chimeraC-GFP, deleted for tcb1/2, scs2/22 and ist2
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-57519:
Electron tomogram of resin-embedded yeast cells expressing Tcb3(1-272)-chimeraC-GFP, deleted for tcb1/2, scs2/22 and ist2
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-57521:
Electron tomogram of resin-embedded yeast cells expressing Tcb3(191-490)-GFP-chimeraC, deleted for tcb1/2, scs2/22 and ist2
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-57522:
Electron tomogram of resin-embedded yeast cells expressing Tcb3(191-272)-chimeraC-GFP, deleted for tcb1/2, scs2/22 and ist2
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-57523:
Cryo-electron tomogram of yeast cells expressing Tcb3(191-490)-chimeraC-GFP, deleted for tcb1/2, scs2/22 and ist2.
Method: electron tomography / : Ivanovic L, Boinet AL, Picco A, Zinn E, Ross-Kaschitza D, Kaksonen M, Kukulski W

EMDB-55773:
Leishmania mexicana secreted acid phosphatase
Method: single particle / : Bose P, Grossman-Haham I

EMDB-56536:
Leishmania mexicana secreted acid phosphatase at pH 5.6
Method: single particle / : Bose P, Grossman-Haham I

PDB-28ik:
Leishmania mexicana secreted acid phosphatase at pH 5.6
Method: single particle / : Bose P, Grossman-Haham I

PDB-9tbj:
Leishmania mexicana secreted acid phosphatase
Method: single particle / : Bose P, Grossman-Haham I

EMDB-54248:
Trispecific fab 17 with O1M 93C virus like particle
Method: single particle / : Stuart DI, Duyvesteyn HME, Ren J, Fry EE

EMDB-54261:
Trispecific fab 34 with O1M 93C virus like particle
Method: single particle / : Stuart DI, Duyvesteyn HME, Ren J, Fry EE

EMDB-54263:
Trispecific fab 49 with O1M 93C virus like particle
Method: single particle / : Stuart DI, Duyvesteyn HME, Ren J, Fry EE

EMDB-54629:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54630:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54631:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54632:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6r:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6s:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6t:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6u:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-44630:
human CRL2-ZYG11B complex
Method: single particle / : Liu X, Gross JD

PDB-9bj8:
human CRL2-ZYG11B complex
Method: single particle / : Liu X, Gross JD

EMDB-44631:
Human CRL-2 ZYG11B binding to human NLRP1 Gly/N degron
Method: single particle / : Liu X, Gross JD

PDB-9bj9:
Human CRL-2 ZYG11B binding to human NLRP1 Gly/N degron
Method: single particle / : Liu X, Gross JD

EMDB-44588:
human ZYG11B and EloginB/C complex
Method: single particle / : Liu X, Gross DJ

PDB-9bid:
human ZYG11B and EloginB/C complex
Method: single particle / : Liu X, Gross DJ

EMDB-44589:
human ZYG11B ElonginB/C complex binding to SARS-CoV2 Orf10 protein
Method: single particle / : Liu X, Gross JD

PDB-9bie:
human ZYG11B ElonginB/C complex binding to SARS-CoV2 Orf10 protein
Method: single particle / : Liu X, Gross JD

EMDB-49477:
Computationally optimized broadly reactive influenza B hemagglutinin BC2 bound by antibody #46
Method: single particle / : Dzimianski JV, Kunkel I, Balasco Serrao VH, DuBois RM

PDB-9nja:
Computationally optimized broadly reactive influenza B hemagglutinin BC2 bound by antibody #46
Method: single particle / : Dzimianski JV, Kunkel I, Balasco Serrao VH, DuBois RM

EMDB-56448:
Cryo-EM structure of mouse Pannexin 1 in complex with a ligand
Method: single particle / : Drulyte I

EMDB-48458:
Structure of the bacteriophage T4 portal-neck-tail connector complex
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

EMDB-48459:
Structure of the distal part of the bacteriophage T4 tail
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

EMDB-48460:
Structure of the middle part of the bacteriophage T4 tail
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

EMDB-48462:
6-fold-symmetric reconstruction focused on the bacteriophage T4 neck region
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

EMDB-48463:
6-fold-symmetric reconstruction focused on the middle part of the bacteriophage T4 tail
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

EMDB-48464:
6-fold-symmetric reconstruction focused on the bacteriophage T4 baseplate
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

PDB-9mof:
Structure of the bacteriophage T4 portal-neck-tail connector complex
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

PDB-9mog:
Structure of the distal part of the bacteriophage T4 tail
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

PDB-9moh:
Structure of the middle part of the bacteriophage T4 tail
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

EMDB-71643:
CryoEM structure of the YonE portal protein from Bacillus phage SPbeta
Method: single particle / : Mishra BP, Ve T

EMDB-71644:
CryoEM structure of filament of Bacillus subtilis TIR domain protein SpbK
Method: helical / : Mishra BP, Ve T

PDB-9pha:
CryoEM structure of the YonE portal protein from Bacillus phage SPbeta
Method: single particle / : Mishra BP, Ve T

PDB-9phb:
CryoEM structure of filament of Bacillus subtilis TIR domain protein SpbK
Method: helical / : Mishra BP, Ve T

EMDB-48324:
Structure of the bacteriophage T4 portal-neck-tail complex
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

PDB-9mkb:
Structure of the bacteriophage T4 portal-neck-tail complex
Method: single particle / : Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB

EMDB-71766:
Cryo-EM structure of J601-1B2 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more