[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 82 items for (author: qin & lj)

EMDB-67051:
pilus-like-gamma, a bacteria pilus-Like structure obtained from a Karstcave from Guilin city, Guangxi ZhuangAutonomous Region, China
Method: helical / : Hu MX, Zhang Q, Chen S, Ge QJ, Wang JW, Yan N, Qin LJ

EMDB-66838:
Pilus-like-alpha, a bacteria pilus-like structure obtained from a Karst cave from Guilin City, Guangxi Zhuang Autonomous Region, China
Method: helical / : Hu MX, Zhang Q, Chen S, Ge QJ, Wang JW, Yan N, Qin LJ

EMDB-67046:
pilus-like-beta, a bacteria pilus-like structure obtained from a Karst cave from Guilin City, Guangxi Zhuang Autonomous Region, China
Method: helical / : Hu MX, Zhang Q, Chen S, Ge QJ, Wang JW, Yan N, Qin LJ

EMDB-68067:
TLP-2a, a glycofibril obtained from a Karst cave from Guilin City, Guangxi Zhuang Autonomous Region, China
Method: helical / : Hu MX, Zhang Q, Chen S, Ge QJ, Wang JW, Yan N, Qin LJ

EMDB-68068:
TLP-2f, a glycofibril obtained from a Karst cave from Guilin City, Guangxi Zhuang Autonomous Region, China
Method: helical / : Hu MX, Zhang Q, Chen S, Ge QJ, Wang JW, Yan N, Qin LJ

EMDB-68069:
TLP-2g, a glycofibril obtained from a Karst cave from Guilin City, Guangxi Zhuang Autonomous Region, China
Method: helical / : Hu MX, Zhang Q, Chen S, Ge QJ, Wang JW, Yan N, Qin LJ

EMDB-68070:
TLP-2h, a glycofibril obtained from a Karst cave from Guilin City, Guangxi Zhuang Autonomous Region, China
Method: helical / : Hu MX, Zhang Q, Chen S, Ge QJ, Wang JW, Yan N, Qin LJ

EMDB-63007:
Consensus olfactory receptor consOR6 in complex with mini-Golf trimeric protein
Method: single particle / : Wang T, Wu LJ, Hua T, Liu ZJ

EMDB-63008:
Consensus olfactory receptor consOR6 bound to alpha-hexyl cinnamaldehyde and in complex with mini-Golf trimeric protein
Method: single particle / : Wang T, Wu LJ, Hua T, Liu ZJ

EMDB-63009:
Consensus olfactory receptor consOR6 in complex with mini-Golf trimeric protein
Method: single particle / : Wang T, Wu LJ, Hua T, Liu ZJ

EMDB-63010:
Consensus olfactory receptor consOR6 in complex with Gs trimeric protein
Method: single particle / : Wang T, Wu LJ, Hua T, Liu ZJ

EMDB-63011:
Consensus olfactory receptor bmOR6A2 in complex with mini-Golf trimeric protein
Method: single particle / : Wang T, Wu LJ, Hua T, Liu ZJ

EMDB-63012:
Consensus olfactory receptor bmOR6A2 in complex with mini-Golf trimeric protein
Method: single particle / : Wang T, Wu LJ, Hua T, Liu ZJ

EMDB-63013:
Consensus olfactory receptor bmOR6A2 in complex with mini-Golf trimeric protein
Method: single particle / : Wang T, Wu LJ, Hua T, Liu ZJ

EMDB-65730:
SuperFi Cas9 - 20nt sgRNA - DNA ternary complex Class A
Method: single particle / : Zheng R, Ma LJ

EMDB-65732:
SuperFi Cas9 - 20nt sgRNA - DNA ternary complex Class B
Method: single particle / : Zheng R, Ma LJ

EMDB-65733:
SuperFi Cas9 - 20nt sgRNA - DNA ternary complex Class C
Method: single particle / : Zheng R, Ma LJ

EMDB-65734:
SuperFi Cas9 - 20nt sgRNA - DNA ternary complex Class D
Method: single particle / : Zheng R, Ma LJ

EMDB-65771:
SuperFi Cas9 - 22nt sgRNA - DNA ternary complex
Method: single particle / : Zheng R, Ma LJ

EMDB-65809:
SuperFi Cas9 - 22nt sgRNA - DNA ternary complex Class B
Method: single particle / : Zheng R, Ma LJ

EMDB-65810:
SuperFi Cas9 - 22nt sgRNA - DNA ternary complex Class C
Method: single particle / : Zheng R, Ma LJ

EMDB-65827:
SuperFi Cas9 - 20nt sgRNA - DNA ternary complex Class E
Method: single particle / : Zheng R, Ma LJ

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-61439:
Cryo-EM structure of GPR65 complexed with miniGs in pH6.5
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-62292:
cryo-EM structure of TRIP12 in complex with K29/48 branched-triUb
Method: single particle / : Ai HS, Wu XW, Liu L

EMDB-39927:
Cryo-EM structure of GPR4 complexed with Gs in pH6.0
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-39928:
Cryo-EM structure of GPR4 complexed with Gs in pH7.5
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-61440:
Cryo-EM structure of inactive GPR4 with NE52-QQ57
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-61441:
Cryo-EM structure of GPR4 complexed with miniGs/q in pH6.8
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-61442:
Cryo-EM structure of GPR4 complexed with Gs in pH6.8
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-61443:
Cryo-EM structure of GPR4 complexed with miniGs/q in pH7.5
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-61445:
Cryo-EM structure of intermediate state GPR4 complexed with miniGs/q in pH7.5
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-61489:
Cryo-EM structure of GPR4 complexed with miniG13 in pH6.8
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-63068:
Cryo-EM structure of GPR4 complexed with Gs in pH8.0
Method: single particle / : Yue XL, Wu LJ, Hua T, Liu ZJ

EMDB-39208:
Cryo-EM structure of SARS-CoV-2 prototype RBD in complex with raccoon dog ACE2 (local refinement)
Method: single particle / : Li LJ, Luo CL, Qi JX, Gao GF

EMDB-39229:
Cryo-EM structure of SARS-CoV-2 alpha variant spike protein in complex with raccoon dog ACE2 (local refinement)
Method: single particle / : Li LJ, Luo CL, Qi JX, Gao GF

EMDB-39209:
Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with raccoon dog ACE2
Method: single particle / : Li LJ, Luo CL, Qi JX, Gao GF

EMDB-39224:
Cryo-EM map of SARS-CoV-2 alpha variant spike protein in complex with raccoon dog ACE2
Method: single particle / : Li LJ, Luo CL, Qi JX, Gao GF

EMDB-37711:
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 RBD in complex with human ACE2
Method: single particle / : Li LJ, Gu YH, Qi JX, Gao GF

EMDB-38460:
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P), 1-RBD-up state
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38463:
Cryo-EM structure of SARS-CoV-2 Omicron EG.5 spike protein(6P), RBD-closed state
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38476:
Cryo-EM structure of SARS-CoV-2 Omicron HV.1 spike protein(6P), RBD-closed state
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38488:
Cryo-EM structure of SARS-CoV-2 Omicron EG.5.1 spike protein(6P), RBD-closed state
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38495:
SARS-CoV-2 Omicron EG.5.1 RBD in complex with human ACE2 (local refined from the spike protein)
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38496:
SARS-CoV-2 Omicron HV.1 RBD in complex with human ACE2 (local refinement from the spike protein)
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38498:
Cryo-EM structure of SARS-CoV-2 Omicron EG.5.1 spike protein(6P) in complex with human ACE2
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38502:
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P) in complex with human ACE2
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38505:
Cryo-EM structure of SARS-CoV-2 Omicron HV.1 spike protein(6P) in complex with human ACE2
Method: single particle / : Li LJ, Gu YH, Shi KY, Qi JX, Gao GF

EMDB-38826:
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein in complex with human ACE2
Method: single particle / : Li LJ, Gu YH, Qi JX, Gao GF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more