[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,830 items for (author: mu & j)

EMDB-53945:
Co-chaperone Bag1-bound human 26S proteasome in SBag2 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-47886:
CRISPR-associated deaminase Cad1 in cA4 bound form, symmetry expanded dimer, consensus map
Method: single particle / : Zhao Y, Whyms CT, Li H

EMDB-47887:
CRISPR-associated deaminase Cad1 in cA4 bound form, symmetry expanded dimer, CARF domain focus refined map
Method: single particle / : Zhao Y, Whyms CT, Li H

EMDB-47888:
CRISPR-associated deaminase Cad1 in cA4 bound form, symmetry expanded dimer, deaminase domain focus refined map
Method: single particle / : Zhao Y, Whyms CT, Li H

EMDB-47890:
CRISPR-associated deaminase Cad1 in cA4 bound form, symmetry expanded dimer, refined against a composite map
Method: single particle / : Zhao Y, Whyms CT, Li H

EMDB-48116:
CRISPR-associated deaminase Cad1 in Apo form
Method: single particle / : Zhao Y, Whyms CT, Li H

PDB-9ebt:
CRISPR-associated deaminase Cad1 in cA4 bound form, symmetry expanded dimer, refined against a composite map
Method: single particle / : Zhao Y, Whyms CT, Li H

PDB-9eka:
CRISPR-associated deaminase Cad1 in Apo form
Method: single particle / : Zhao Y, Whyms CT, Li H

EMDB-48622:
Structure of a native Drosophila melanogaster Pol II Elongation Complex with a well-defined Rpb4/Rpb7 stalk
Method: single particle / : Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache JP, Murakami K

PDB-9mu7:
Structure of a native Drosophila melanogaster Pol II Elongation Complex with a well-defined Rpb4/Rpb7 stalk
Method: single particle / : Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache JP, Murakami K

PDB-9szt:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1.2 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

PDB-9szv:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1.3 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52097:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52193:
Co-chaperone Bag1-bound human 26S proteasome in SBAG2 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52194:
Co-chaperone Bag1-bound human 26S proteasome in SBAG3 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52195:
Hsp70-NBD:Bag1:Rpn1 ternary complex class 1
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52196:
Hsp70-NBD:Bag1:Rpn1 ternary complex class 2
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

PDB-9heu:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue6:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue7:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-49293:
cryoEM structure of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49294:
cryoEM structure of the A-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49295:
cryoEM structure of the B-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49296:
cryoEM structure of the human OGA-L Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49297:
cryoEM structure of the human OGA-L Catalytic Dimer, extra A-chain density
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne2:
cryoEM structure of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne4:
cryoEM structure of the A-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne5:
cryoEM structure of the B-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-63444:
Zebrafish ovum lysosomal peptide:N-glycanase
Method: single particle / : Honda A, Kamada K, Burton-Smith RN, Murata K, Suzuki T

PDB-9lwg:
Zebrafish ovum lysosomal peptide:N-glycanase
Method: single particle / : Honda A, Kamada K, Burton-Smith RN, Murata K, Suzuki T

EMDB-49930:
Cryo-EM structure of the glycosyltransferase GtrB in the substrate-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, Bhattacharjee B, di Muccio G, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49931:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49932:
Cryo-EM structure of the glycosyltransferase GtrB in the apo state (octamer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49933:
Cryo-EM structure of the glycosyltransferase GtrB (tetramer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49935:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-intermediate state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyc:
Cryo-EM structure of the glycosyltransferase GtrB in the substrate-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, Bhattacharjee B, di Muccio G, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyd:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nye:
Cryo-EM structure of the glycosyltransferase GtrB in the apo state (octamer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyf:
Cryo-EM structure of the glycosyltransferase GtrB (tetramer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyk:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-intermediate state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-73821:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

PDB-9z5q:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

EMDB-51080:
Group II intron assembly intermediate Domain 1, 2, 3 and 4 "Fully open" state
Method: single particle / : Jadhav SS, Marcia M

PDB-9g56:
Group II intron assembly intermediate Domain 1, 2, 3 and 4 "Fully open" state
Method: single particle / : Jadhav SS, Marcia M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more