[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 162 items for (author: mohan & r)

EMDB-72368:
Trm10-tRNA complex (closed conformation)
Method: single particle / : Nandi S, Strassler SE, Conn GL

EMDB-72369:
Trm10-tRNA complex (open conformation)
Method: single particle / : Nandi S, Strassler SE, Conn GL

EMDB-72370:
Trm10-tRNA complex (Two Trm10 monomers bound to one tRNA)
Method: single particle / : Nandi S, Strassler SE, Conn GL

PDB-9xzq:
Trm10-tRNA complex (closed conformation)
Method: single particle / : Nandi S, Strassler SE, Conn GL

PDB-9xzr:
Trm10-tRNA complex (open conformation)
Method: single particle / : Nandi S, Strassler SE, Conn GL

PDB-9xzs:
Trm10-tRNA complex (Two Trm10 monomers bound to one tRNA)
Method: single particle / : Nandi S, Strassler SE, Conn GL

EMDB-49293:
cryoEM structure of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49294:
cryoEM structure of the A-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49295:
cryoEM structure of the B-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49296:
cryoEM structure of the human OGA-L Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-49297:
cryoEM structure of the human OGA-L Catalytic Dimer, extra A-chain density
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne2:
cryoEM structure of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne4:
cryoEM structure of the A-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

PDB-9ne5:
cryoEM structure of the B-chain of the human OGA-L Catalytic Dimer
Method: single particle / : Nyenhuis SB, Steenackers A, Hinshaw JE, Hanover JA

EMDB-71579:
Subtomogram average of influenza hemagglutinin (A/Puerto Rico/8/1934)
Method: subtomogram averaging / : Huang QJ, Schiffer CA

EMDB-44668:
CoV SARS-2 spike protein complexed by mEM with monoclonal antibody cc6.30.2 IgG
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44655:
Representative polyclonal epitopes targeted on HA H1 protein with complexing by conventional EMPEM
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44656:
Representative polyclonal epitopes targeted on HA Influenza B protein with complexing by conventional EMPEM
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44657:
Representative polyclonal epitopes targeted on CoV OC43 spike protein with conventional EMPEM complexing
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44658:
HCoV-OC43 Spike glycoprotein
Method: single particle / : Torrents de la Pena A, Sewall LM, Ward AB

EMDB-44659:
Representative polyclonal epitopes targeted on CoV HKU1 spike protein with conventional EMPEM complexing
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44660:
Representative polyclonal epitopes targeted on SARS-CoV-2 spike protein with conventional EMPEM complexing
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44661:
Representative polyclonal epitopes targeted on HA H1 protein with complexing by mEM
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44662:
Representative polyclonal epitopes targeted on HA Influenza B protein with complexing by mEM
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44663:
Representative polyclonal epitopes targeted on CoV OC43 spike protein with complexing by mEM
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44664:
Representative polyclonal epitopes targeted on CoV HKU1 spike protein with complexing by mEM
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44665:
Representative polyclonal epitopes targeted on SARS-CoV-2 spike protein with complexing by mEM
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44667:
CoV SARS-2 spike protein complexed by mEM with monoclonal antibody TXG-0078 Fab
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44669:
HIV Env BG505.SOSIP N332-GT5 protein complexed by mEM with polyclonal Fab representative of Group 1
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44670:
HIV Env BG505.SOSIP N332-GT5 protein complexed by mEM with polyclonal Fab representative of Group 2
Method: single particle / : Sewall LM, Ward AB, Torrents de la Pena A

EMDB-44679:
SARS-CoV-2 S glycoprotein in closed state
Method: single particle / : Torrents de la Pena A, Sewall LM, Ward AB

EMDB-44680:
SARS-Cov-2 spike glycoprotein with 1 RBD up
Method: single particle / : Torrents de la Pena A, Sewall LM, Ward AB

EMDB-47018:
Subtomogram average of hemagglutinin from influenza A virions
Method: subtomogram averaging / : Huang QJ, Schiffer CA

EMDB-47027:
Subtomogram average of hemagglutinin from influenza A virions incubated with 6.5 mM LSTc
Method: subtomogram averaging / : Huang QJ, Schiffer CA

EMDB-47028:
Subtomogram average of hemagglutinin with closest HA neighbour from influenza A virions incubated with 6.5 mM LSTc
Method: subtomogram averaging / : Huang QJ, Schiffer CA

EMDB-47029:
Subtomogram average of hemagglutinin with second closest HA neighbour from influenza A virions incubated with 6.5 mM LSTc
Method: subtomogram averaging / : Huang QJ, Schiffer CA

EMDB-47030:
Subtomogram average of hemagglutinin with closest HA neighbour from influenza A virions incubated with 100 uM LSTc
Method: subtomogram averaging / : Huang QJ, Schiffer CA

EMDB-49095:
Representative tomogram of LSTc-bound influenza virions
Method: electron tomography / : Huang QJ, Song K, Schiffer CA, Somasundaran M

EMDB-49096:
Representative tomogram of influenza (PR8/34)
Method: electron tomography / : Huang QJ, Song K, Schiffer CA, Somasundaran M

PDB-9n8p:
Subtomogram average of dimers of influenza HA trimers
Method: subtomogram averaging / : Huang QJ, Song K, Schiffer CA, Somasundaran M

EMDB-50748:
Asgard ESCRT-IIIB filament structure
Method: helical / : Chaaban S, Souza DP, Baum B

EMDB-50749:
Asgard ESCRT-IIIB membrane-bound protofilament structure
Method: helical / : Chaaban S, Souza DP, Baum B

PDB-9ftl:
Asgard ESCRT-IIIB filament structure
Method: helical / : Chaaban S, Souza DP, Baum B

PDB-9ftm:
Asgard ESCRT-IIIB membrane-bound protofilament structure
Method: helical / : Chaaban S, Souza DP, Baum B

EMDB-44347:
GP38-GnH-DS-Gc in the pre-fusion conformation
Method: single particle / : McFadden E, McLellan JS

PDB-9b8j:
GP38-GnH-DS-Gc in the pre-fusion conformation
Method: single particle / : McFadden E, McLellan JS

EMDB-42524:
Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5
Method: single particle / : Huynh KW, Chang JS, Fennell KF, Che Y, Wu H

PDB-8usz:
Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5
Method: single particle / : Huynh KW, Chang JS, Fennell KF, Che Y, Wu H

EMDB-43667:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) in the postfusion conformation in complex with 1G2 and 7H3 Fabs
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

EMDB-43670:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, global refinement
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more