3DEM data search - EMN search

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Processing method	electron tomography subtomogram averaging single particle reconstruction helical reconstruction electron crystallography

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Entry	Title Data Release Date Last Update Submission Date Authors Processing Site EMPIAR-ID
Article	Journal Name PubMed ID Country
Sample	Component Species Aggregation State Molecular Weight (MDa)
Experiment	Cryogen Name Instrument for Vitrification Specimen Holder Specimen Temperature Microscope Accelerating Voltage Electron Source Detector
Processing	Method Resolution Resolution Method CTF correction 3D reconstruction Algorithm Software fo 3D reconstruction Model PDB ID Software for modeling

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Showing all 27 items for (author: marabini & r)

EMDB-10768:
HAdV-F41 Capsid

PDB-6yba:
HAdV-F41 Capsid

EMDB-4551:
Near Atomic Structure of an Atadenovirus Shows a possible gene duplication event and Intergenera Variations in Cementing Proteins

PDB-6qi5:
Near Atomic Structure of an Atadenovirus Shows a possible gene duplication event and Intergenera Variations in Cementing Proteins

EMDB-11328:
SARS-CoV-2 spike in prefusion state

EMDB-11336:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)

EMDB-11337:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation)

EMDB-11341:
SARS-CoV-2 stabilized spike in prefusion state (1-up conformation)

PDB-6zow:
SARS-CoV-2 spike in prefusion state

PDB-6zp5:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)

PDB-6zp7:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation)

EMDB-3003:
Structure of adenovirus light particle Ad5/FC31 L2

EMDB-3004:
Structure of adenovirus light particle Ad5/FC31 L3

EMDB-5525:
Electron cryo-microscopy of ABC BmrA in 12-fold symmetry rings

EMDB-5526:
Electron cryo-microscopy of ABC BmrA in 13-fold symmetry rings

EMDB-1933:
wt Rabbit Hemorrhagic Disease Virus (RHDV)capsid

PDB-3zue:
Rabbit Hemorrhagic Disease Virus (RHDV)capsid protein

EMDB-1934:
L17 Rabbit Hemorrhagic Disease Virus (RHDV)capsid

EMDB-1935:
L42 Rabbit Hemorrhagic Disease Virus (RHDV)capsid

EMDB-1936:
N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid

EMDB-1937:
N42 Rabbit Hemorrhagic Disease Virus (RHDV) T4 capsid

EMDB-1938:
C42 Rabbit Hemorrhagic Disease Virus (RHDV) capsid

EMDB-1939:
Rabbit Hemorrhagic Disease Virus (RHDV)capsid calculated from merged wt, L17 and N42 data sets

EMDB-1579:
Human Adenovirus type 5

EMDB-1586:
Human Adenovirus type 2 ts1 mutant

EMDB-1489:
Human Adenovirus type 5 with 31 residue extension at the N-terminus of polypeptide IIIa

EMDB-1490:
Human Adenovirus type 5

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News

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

Version 3 of the EMDB header file is now the official format.
The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

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Mar 5, 2020. Novel coronavirus structure data

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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