[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,066 items for (author: mann & p)

EMDB-53132:
Rubisco subtomogram average from chloroplasts of two weeks old Physcomitrium patens protonemata cells.
Method: subtomogram averaging / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53134:
Cryo-electron tomograms of Arabidopsis thaliana embryos.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53136:
Cryo-electron tomograms of Limonium bicolor salt gland.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-53142:
Cryo-electron tomograms of Physcomitrium patens phyllids.
Method: electron tomography / : Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

EMDB-56697:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens protonema tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57163:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens gametophore leaflet tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57164:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens protonema tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57165:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens gametophore leaflet tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57166:
Cryo-ET of a plasmodesma in GHL17 Physcomitrium patens protonema tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57167:
Cryo-ET of a plasmodesma in GHL17 Physcomitrium patens protonema tissue
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57168:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens protonema tissue treated with abscisic acid
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-57169:
Cryo-ET of a plasmodesma in wild type Physcomitrium patens protonema tissue treated with abscisic acid
Method: electron tomography / : Dickmanns M, Poege M, Xu P, Gombos S, Barr ZK, Miras M, Plitzko J, Simon R, Schulze W, Frommer WB, Baumeister W

EMDB-55187:
Desmotubule-coating assembly in protonemata of GHL17 Physcomitrium patens,centered on assembly surface
Method: subtomogram averaging / : Poege M, Xu P, Dickmanns M, Baumeister W

EMDB-54401:
State 2 MAP 3 RNA Pol II activated elongation complex with SETD2 bound to proximal upstream H3
Method: single particle / : Walshe JL, Ochmann M, Dienemann C, Cramer P

PDB-9rze:
State 2 MAP 3 RNA Pol II activated elongation complex with SETD2 bound to proximal upstream H3
Method: single particle / : Walshe JL, Ochmann M, Dienemann C, Cramer P

EMDB-49315:
Polyclonal immune complex of Fab from serum of animal 1 at week 23 binding H1 HA
Method: single particle / : Leon AN, Richey ST, Ferguson JA, Han J, Ward AB

EMDB-49316:
Polyclonal immune complex of Fab from serum of animal 1 at week 35 binding H1 HA
Method: single particle / : Richey ST, Leon AN, Ferguson JA, Han J, Ward AB

EMDB-49317:
Polyclonal immune complex of Fab from serum of animal 2 at week 35 binding H1 HA
Method: single particle / : Ferguson JA, Leon AN, Richey ST, Han J, Ward AB

EMDB-49318:
Polyclonal immune complex of Fab from serum of animal 4 at week 23 binding H1 HA
Method: single particle / : Richey ST, Leon AN, Ferguson JA, Han J, Ward AB

EMDB-49319:
Polyclonal immune complex of Fab from serum of animal 4 at week 33 binding H1 HA
Method: single particle / : Richey ST, Leon AN, Ferguson JA, Han J, Ward AB

EMDB-49320:
Polyclonal immune complex of Fab from serum of animal 4 at week 35 binding H1 HA
Method: single particle / : Richey ST, Leon AN, Ferguson JA, Han J, Ward AB

EMDB-49321:
Polyclonal immune complex of Fab from serum of animal 5 at week 35 binding H1 HA
Method: single particle / : Richey ST, Leon AN, Ferguson JA, Han J, Ward AB

EMDB-49322:
Polyclonal immune complex of Fab from serum of animal 6 at week 23 binding H1 HA
Method: single particle / : Han J, Leon AN, Richey ST, Ferguson JA, Ward AB

EMDB-49323:
Polyclonal immune complex of Fab from serum of animal 6 at week 33 binding H1 HA
Method: single particle / : Han J, Leon AN, Richey ST, Ferguson JA, Ward AB

EMDB-49324:
Polyclonal immune complex of Fab from serum of animal 6 at week 35 binding H1 HA
Method: single particle / : Han J, Leon AN, Richey ST, Ferguson JA, Ward AB

EMDB-70083:
Human 80S ribosome stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

EMDB-70084:
Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

EMDB-70086:
Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

PDB-9o3v:
Human 80S ribosome stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

PDB-9o3w:
Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

PDB-9o3y:
Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain
Method: single particle / : Sauer PV, Schuller AP, Hamann LG

EMDB-53260:
Inward-occluded structure of human GABA transporter 3 bound to substrate GABA
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

PDB-9qo9:
Inward-occluded structure of human GABA transporter 3 bound to substrate GABA
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

EMDB-52784:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb11
Method: single particle / : Rasmussen T, Kuhn BT, Bottcher B, Geertsma ER

EMDB-52785:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb4
Method: single particle / : Rasmussen T, Kuhn BT, Bottcher B, Geertsma ER

EMDB-52852:
structure of two human ELF2 transcription factors in complex with a nucleosome
Method: single particle / : Xiao T, Crowe-McAuliffe C, Dienemann C, Taipale J

PDB-9igj:
structure of two human ELF2 transcription factors in complex with a nucleosome
Method: single particle / : Xiao T, Crowe-McAuliffe C, Dienemann C, Taipale J

EMDB-55930:
TAF15 amyloid filament fold B variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-55931:
TAF15 amyloid filament fold B variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-55932:
TAF15 amyloid filament fold B variant 3
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56025:
TAF15 amyloid filament fold H (Y38C)
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56026:
TAF15 amyloid filament fold G
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56027:
TAF15 amyloid filament fold F
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56028:
TAF15 amyloid filament fold E variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56029:
TAF15 amyloid filament fold E variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56030:
TAF15 amyloid filament fold D
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56031:
TAF15 amyloid filament fold C variant 1
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56032:
TAF15 amyloid filament fold C variant 1 doublet
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56040:
TAF15 amyloid filament fold D prime
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

EMDB-56041:
TAF15 amyloid filament fold C variant 2
Method: helical / : Tetter S, Varghese NR, Ryskeldi-Falcon B

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more