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Structure paper

TitleIn situ cryoEM structures of PFV
Journal, issue, pagesTo Be Published
Publish dateMay 9, 2023 (structure data deposition date)
AuthorsCalcraft T / Lindemann D / Rosenthal PB
External linksSearch PubMed
MethodsEM (single particle) / EM (subtomogram averaging) / EM (tomography)
Resolution2.91 - 13.5 Å
Structure data

17309
EMDB entry, No image

8ozh

EMDB-17309, PDB-8ozh:
In situ cryoEM structure of Prototype Foamy Virus Env trimer
Method: EM (single particle) / Resolution: 2.91 Å

17311
EMDB entry, No image

8ozj

EMDB-17311, PDB-8ozj:
In situ cryoEM structure of Prototype Foamy Virus Env dimer of trimers
Method: EM (single particle) / Resolution: 3.7 Å

17312
EMDB entry, No image

8ozk

EMDB-17312, PDB-8ozk:
In situ cryoEM structure of the Prototype Foamy Virus capsid, icosahedral map
Method: EM (single particle) / Resolution: 3.89 Å

17313
EMDB entry, No image

8ozl

EMDB-17313, PDB-8ozl:
In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction
Method: EM (single particle) / Resolution: 3.4 Å

17314
EMDB entry, No image

8ozm

EMDB-17314, PDB-8ozm:
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 1 localised reconstruction
Method: EM (single particle) / Resolution: 3.4 Å

17315
EMDB entry, No image

8ozn

EMDB-17315, PDB-8ozn:
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 2 localised reconstruction
Method: EM (single particle) / Resolution: 3.5 Å


EMDB entry, No image

EMDB-17316: In situ subtomogram average of Prototype Foamy Virus Env trimer
Method: EM (subtomogram averaging) / Resolution: 4.9 Å

17317
EMDB entry, No image

8ozp

EMDB-17317, PDB-8ozp:
In situ subtomogram average of Prototype Foamy Virus Env pentamer of trimers
Method: EM (subtomogram averaging) / Resolution: 11.9 Å

17318
EMDB entry, No image

8ozq

EMDB-17318, PDB-8ozq:
In situ subtomogram average of Prototype Foamy Virus Env hexamer of trimers
Method: EM (subtomogram averaging) / Resolution: 10.0 Å


EMDB entry, No image

EMDB-17319: In situ subtomogram average of the Prototype Foamy Virus capsid, wild-type Gag
Method: EM (subtomogram averaging) / Resolution: 10.2 Å


EMDB entry, No image

EMDB-17320: In situ subtomogram average of the Prototype Foamy Virus capsid, p68 Gag
Method: EM (subtomogram averaging) / Resolution: 13.5 Å


EMDB entry, No image

EMDB-17321: Cryotomogram of Prototype Foamy Virus particles, wild-type Gag
Method: EM (tomography)


EMDB entry, No image

EMDB-17322: Cryotomogram of Prototype Foamy Virus particles, p68 Gag
Method: EM (tomography)

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-CLR:
CHOLESTEROL

ChemComp-PTY:
PHOSPHATIDYLETHANOLAMINE / phospholipid*YM

Source
  • eastern chimpanzee simian foamy virus
KeywordsVIRAL PROTEIN / membrane fusion / envelope glycoprotein / foamy virus / MPER / transmembrane / MEMBRANE PROTEIN / capsid / Gag / pentamer / hexamer

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