[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 538 items for (author: lucas & s)

EMDB-49124:
Consensus reconstruction of the Dp71L-PP1A-eIF2alpha holophosphatase stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-49162:
Focused refinement of G-actin within the Dp71L-PP1A-eIF2alpha-DNAseI-G-actin complex
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49163:
Focused refinement of the Dp71L-eIF2alpha-PP1A subcomplex within the holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49164:
Focused refinement of DNAseI within the Dp71L-eIF2alpha-PP1A-Gactin-DNAseI holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49223:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

PDB-9nb9:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-48086:
SIRT6 bound to an H3K27Ac nucleosome
Method: single particle / : Markert J, Wang Z, Cole P, Farnung L

PDB-9eil:
SIRT6 bound to an H3K27Ac nucleosome
Method: single particle / : Markert J, Wang Z, Cole P, Farnung L

EMDB-19111:
CryoEM structure of mouse GARP-lTGFbeta1 in complex with a Fab fragment derived from an activating antibody.
Method: single particle / : Felix J, Lambert F, Marien L, van der Woning B, Savvides SN, Lucas S

PDB-8rex:
CryoEM structure of mouse GARP-lTGFbeta1 in complex with a Fab fragment derived from an activating antibody.
Method: single particle / : Felix J, Lambert F, Marien L, van der Woning B, Savvides SN, Lucas S

EMDB-53511:
SpCas9 with computationally designed SpCas9_b10 binder
Method: single particle / : Pacesa M, Nickel L, Correia BE

EMDB-52061:
Sla2 C-terminal region (Residues 560-968) (REND and THATCH domains)
Method: single particle / : Draper-Barr G, Gustavsson E, Landau M, Garcia-Alai MM

PDB-9hdd:
Sla2 C-terminal region (Residues 560-968) (REND and THATCH domains)
Method: single particle / : Draper-Barr G, Gustavsson E, Landau M, Garcia-Alai MM

EMDB-53510:
SpCas9 with computationally designed SpCas9_b3 binder
Method: single particle / : Pacesa M, Nickel L, Correia BE

EMDB-47841:
CHD1-nucleosome complex (closed state)
Method: single particle / : James AM, Farnung L

EMDB-47845:
CHD1-nucleosome complex (docked state)
Method: single particle / : James AM, Farnung L

EMDB-47852:
CHD1-nucleosome complex (anchored state with entry side DBR)
Method: single particle / : James AM, Farnung L

EMDB-47856:
CHD1-nucleosome complex (docked state with entry side DBR)
Method: single particle / : James AM, Farnung L

EMDB-47857:
CHD1-nucleosome complex (closed state with exit side DBR)
Method: single particle / : James AM, Farnung L

EMDB-49406:
CHD1-nucleosome complex (anchored state)
Method: single particle / : James AM, Farnung L

PDB-9ear:
CHD1-nucleosome complex (closed state)
Method: single particle / : James AM, Farnung L

PDB-9nh8:
CHD1-nucleosome complex (anchored state)
Method: single particle / : James AM, Farnung L

EMDB-49104:
WEEV McMillan VLP in complex with VLDLR-LBD-Fc ASU
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-49105:
WEEV McMillan VLP Apo
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-49106:
SINV-WEEV Fleming in complex with VLDLR-LBD-Fc ASU
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-47775:
WEEV CBA87 VLP in complex with human PCDH10-EC1
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-47821:
WEEV McMillan VLP in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-47822:
SINV-WEEV Fleming in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-47846:
RRV DKTA VLP in complex with VLDLR-LBD-Fc
Method: single particle / : Raju S, Diamond MS, Fremont DH

PDB-9e96:
WEEV CBA87 VLP in complex with human PCDH10-EC1
Method: single particle / : Raju S, Diamond MS, Fremont DH

PDB-9e9y:
WEEV McMillan VLP in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH

PDB-9e9z:
SINV-WEEV Fleming in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH

PDB-9eau:
RRV DKTA VLP in complex with VLDLR-LBD-Fc
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-51183:
Structure of human PHLPP2 in conformation 2
Method: single particle / : Siess K, Grishkovskaya I, Haselbach D, Leonard TA

EMDB-19110:
CryoEM structure of human GARP-lTGFbeta1 in complex with a Fab fragment derived from an activating antibody.
Method: single particle / : Felix J, Lambert F, Marien L, van der Woning B, Savvides SN, Lucas S

PDB-8rew:
CryoEM structure of human GARP-lTGFbeta1 in complex with a Fab fragment derived from an activating antibody.
Method: single particle / : Felix J, Lambert F, Marien L, van der Woning B, Savvides SN, Lucas S

EMDB-51182:
cryoEM map of human PHLPP2
Method: single particle / : Siess K, Grishkovskaya I, Haselbach D, Leonard TA

EMDB-47999:
map A RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48000:
map B TFIIS
Method: single particle / : Markert J, Farnung L

EMDB-48001:
map C PAF1C
Method: single particle / : Markert J, Farnung L

EMDB-48002:
map D SPT6
Method: single particle / : Markert J, Farnung L

EMDB-48003:
map E IWS1
Method: single particle / : Markert J, Farnung L

EMDB-48004:
map F SETD2 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48005:
map G hexasome
Method: single particle / : Markert J, Farnung L

EMDB-48006:
map H nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48007:
map I RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48008:
map J RNA Polymerase II +27 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48009:
map K ~ -5 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48010:
map L RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48011:
map M RNA Polymerase II intact nucleosome
Method: single particle / : Markert J, Farnung L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more